RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 FOCADQ5VW36 1801 aa12.51□□□□□ -0.41
LINC01004-202ENST00000450686 COL6A3P12111 3177 aa12.5□□□□□ -0.41
LINC01004-202ENST00000450686 RIOK3O14730 519 aaKnown RBP12.5□□□□□ -0.41
LINC01004-202ENST00000450686 DYNLL1P63167 89 aaKnown RBP12.5□□□□□ -0.41
LINC01004-202ENST00000450686 ASTLQ6HA08 431 aaPredicted RBP12.5□□□□□ -0.41
LINC01004-202ENST00000450686 ATF7IPQ6VMQ6 1270 aa12.5□□□□□ -0.41
LINC01004-202ENST00000450686 ZNF280CQ8ND82 737 aa12.5□□□□□ -0.41
LINC01004-202ENST00000450686 ARHGAP45Q92619 1136 aa12.5□□□□□ -0.41
LINC01004-202ENST00000450686 DCBLD2Q96PD2 775 aa12.5□□□□□ -0.41
LINC01004-202ENST00000450686 DNAJC18Q9H819 358 aa12.5□□□□□ -0.41
LINC01004-202ENST00000450686 PIH1D3Q9NQM4 214 aaKnown RBP12.5□□□□□ -0.41
LINC01004-202ENST00000450686 BMP2KQ9NSY1 1161 aaPredicted RBP12.5□□□□□ -0.41
LINC01004-202ENST00000450686 HDAC5Q9UQL6 1122 aa12.5□□□□□ -0.41
LINC01004-202ENST00000450686 DNAH12Q6ZR08 3092 aa12.49□□□□□ -0.41
LINC01004-202ENST00000450686 SGPL1O95470 568 aa12.49□□□□□ -0.41
LINC01004-202ENST00000450686 TFRCP02786 760 aaKnown RBP12.49□□□□□ -0.41
LINC01004-202ENST00000450686 CYP2E1P05181 493 aaPredicted RBP12.49□□□□□ -0.41
LINC01004-202ENST00000450686 CAP2P40123 477 aa12.49□□□□□ -0.41
LINC01004-202ENST00000450686 GSTO1P78417 241 aa12.49□□□□□ -0.41
LINC01004-202ENST00000450686 OS9Q13438 667 aaPredicted RBP12.49□□□□□ -0.41
LINC01004-202ENST00000450686 MTMR2Q13614 643 aa12.49□□□□□ -0.41
LINC01004-202ENST00000450686 TTC39AQ5SRH9 613 aa12.49□□□□□ -0.41
LINC01004-202ENST00000450686 TGFBRAP1Q8WUH2 860 aa12.49□□□□□ -0.41
LINC01004-202ENST00000450686 ASCC2Q9H1I8 757 aaPredicted RBP12.49□□□□□ -0.41
LINC01004-202ENST00000450686 RTN4Q9NQC3 1192 aaKnown RBP12.49□□□□□ -0.41
LINC01004-202ENST00000450686 SLC45A1Q9Y2W3 748 aa12.49□□□□□ -0.41
LINC01004-202ENST00000450686 COL2A1P02458 1487 aaPredicted RBP12.48□□□□□ -0.41
LINC01004-202ENST00000450686 FLT1P17948 1338 aa12.48□□□□□ -0.41
LINC01004-202ENST00000450686 ZBTB7BO15156 539 aaPredicted RBP12.48□□□□□ -0.41
LINC01004-202ENST00000450686 TBC1D12O60347 775 aa12.48□□□□□ -0.41
LINC01004-202ENST00000450686 LDHCP07864 332 aa12.48□□□□□ -0.41
LINC01004-202ENST00000450686 RLBP1P12271 317 aa12.48□□□□□ -0.41
LINC01004-202ENST00000450686 ZAP70P43403 619 aa12.48□□□□□ -0.41
LINC01004-202ENST00000450686 FAM110CQ1W6H9 321 aa12.48□□□□□ -0.41
LINC01004-202ENST00000450686 TNNI3KQ59H18 835 aa12.48□□□□□ -0.41
LINC01004-202ENST00000450686 NAA16Q6N069 864 aaPredicted RBP12.48□□□□□ -0.41
LINC01004-202ENST00000450686 NKX2-3Q8TAU0 364 aa12.48□□□□□ -0.41
LINC01004-202ENST00000450686 COA7Q96BR5 231 aa12.48□□□□□ -0.41
LINC01004-202ENST00000450686 PAWRQ96IZ0 340 aaKnown RBP12.48□□□□□ -0.41
LINC01004-202ENST00000450686 PALD1Q9ULE6 856 aa12.48□□□□□ -0.41
LINC01004-202ENST00000450686 FPGT-TNNI3KV9GXZ4 949 aa12.48□□□□□ -0.41
LINC01004-202ENST00000450686 MYH1P12882 1939 aa12.48□□□□□ -0.41
LINC01004-202ENST00000450686 DDX60LQ5H9U9 1706 aaKnown RBP12.48□□□□□ -0.41
LINC01004-202ENST00000450686 USP17L5A8MUK1 530 aa12.47□□□□□ -0.41
LINC01004-202ENST00000450686 SOX1O00570 391 aaPredicted RBP12.47□□□□□ -0.41
LINC01004-202ENST00000450686 ATMINO43313 823 aaPredicted RBP12.47□□□□□ -0.41
LINC01004-202ENST00000450686 UQCRFS1P1P0C7P4 283 aa12.47□□□□□ -0.41
LINC01004-202ENST00000450686 MIGA1Q8NAN2 632 aa12.47□□□□□ -0.41
LINC01004-202ENST00000450686 PROCA1Q8NCQ7 364 aaPredicted RBP12.47□□□□□ -0.41
LINC01004-202ENST00000450686 NOL10Q9BSC4 688 aaKnown RBP12.47□□□□□ -0.41
LINC01004-202ENST00000450686 HTATIP2Q9BUP3 242 aa12.47□□□□□ -0.41
LINC01004-202ENST00000450686 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.47□□□□□ -0.415e-8■□□□□ 11.2
LINC01004-202ENST00000450686 CCDC8Q9H0W5 538 aaPredicted RBP12.47□□□□□ -0.41
LINC01004-202ENST00000450686 TXNRD2Q9NNW7 524 aa12.47□□□□□ -0.41
LINC01004-202ENST00000450686 PAK6Q9NQU5 681 aaPredicted RBP12.47□□□□□ -0.41
LINC01004-202ENST00000450686 DBNLQ9UJU6 430 aaKnown RBP12.47□□□□□ -0.41
LINC01004-202ENST00000450686 A0A0C4DFX4 3053 aa12.47□□□□□ -0.41
LINC01004-202ENST00000450686 LAMA2P24043 3122 aaKnown RBP12.46□□□□□ -0.41
LINC01004-202ENST00000450686 TTLL13PA6NNM8 815 aa12.46□□□□□ -0.41
LINC01004-202ENST00000450686 CCER2I3L3R5 266 aa12.46□□□□□ -0.41
LINC01004-202ENST00000450686 IPO8O15397 1037 aaKnown RBP12.46□□□□□ -0.41
LINC01004-202ENST00000450686 SURF6O75683 361 aaKnown RBP12.46□□□□□ -0.41
LINC01004-202ENST00000450686 CYP2B6P20813 491 aa12.46□□□□□ -0.41
LINC01004-202ENST00000450686 IRF5Q13568 498 aa12.46□□□□□ -0.41
LINC01004-202ENST00000450686 POTEEQ6S8J3 1075 aa12.46□□□□□ -0.41
LINC01004-202ENST00000450686 PXYLP1Q8TE99 480 aa12.46□□□□□ -0.41
LINC01004-202ENST00000450686 TRIB2Q92519 343 aa12.46□□□□□ -0.41
LINC01004-202ENST00000450686 P2RX7Q99572 595 aaKnown RBP12.46□□□□□ -0.41
LINC01004-202ENST00000450686 PRO3102Q9H379 93 aa12.46□□□□□ -0.41
LINC01004-202ENST00000450686 STAP2Q9UGK3 403 aa12.46□□□□□ -0.41
LINC01004-202ENST00000450686 GJD2Q9UKL4 321 aa12.46□□□□□ -0.41
LINC01004-202ENST00000450686 PNMA3Q9UL41 463 aa12.46□□□□□ -0.41
LINC01004-202ENST00000450686 ZMYND8Q9ULU4 1186 aaPredicted RBP12.46□□□□□ -0.41
LINC01004-202ENST00000450686 EVI5O60447 810 aa12.45□□□□□ -0.42
LINC01004-202ENST00000450686 PDAP1Q13442 181 aaKnown RBP12.45□□□□□ -0.42
LINC01004-202ENST00000450686 ZYXQ15942 572 aaKnown RBP12.45□□□□□ -0.42
LINC01004-202ENST00000450686 ZKSCAN2Q63HK3 967 aa12.45□□□□□ -0.42
LINC01004-202ENST00000450686 C7orf61Q8IZ16 206 aa12.45□□□□□ -0.42
LINC01004-202ENST00000450686 CRACR2BQ8N4Y2 399 aaPredicted RBP12.45□□□□□ -0.42
LINC01004-202ENST00000450686 PAGR1Q9BTK6 254 aa12.45□□□□□ -0.42
LINC01004-202ENST00000450686 CRISPLD2Q9H0B8 497 aa12.45□□□□□ -0.42
LINC01004-202ENST00000450686 BCL11AQ9H165 835 aa12.45□□□□□ -0.42
LINC01004-202ENST00000450686 PI4KBQ9UBF8 816 aa12.45□□□□□ -0.42
LINC01004-202ENST00000450686 ZBTB21Q9ULJ3 1066 aa12.45□□□□□ -0.42
LINC01004-202ENST00000450686 IDH1O75874 414 aaKnown RBP12.44□□□□□ -0.42
LINC01004-202ENST00000450686 HMGCRP04035 888 aa12.44□□□□□ -0.42
LINC01004-202ENST00000450686 CYP7A1P22680 504 aa12.44□□□□□ -0.42
LINC01004-202ENST00000450686 GCLCP48506 637 aaPredicted RBP12.44□□□□□ -0.42
LINC01004-202ENST00000450686 PSEN1P49768 467 aa12.44□□□□□ -0.42
LINC01004-202ENST00000450686 BACE1P56817 501 aa12.44□□□□□ -0.42
LINC01004-202ENST00000450686 IRX3P78415 501 aaPredicted RBP12.44□□□□□ -0.42
LINC01004-202ENST00000450686 CCL14Q16627 93 aa12.44□□□□□ -0.42
LINC01004-202ENST00000450686 SH3D19Q5HYK7 790 aa12.44□□□□□ -0.42
LINC01004-202ENST00000450686 CCDC158Q5M9N0 1113 aa12.44□□□□□ -0.42
LINC01004-202ENST00000450686 ITPRIPQ8IWB1 547 aa12.44□□□□□ -0.42
LINC01004-202ENST00000450686 SSH3Q8TE77 659 aa12.44□□□□□ -0.42
LINC01004-202ENST00000450686 EAF2Q96CJ1 260 aaPredicted RBP12.44□□□□□ -0.42
LINC01004-202ENST00000450686 LRCH3Q96II8 777 aa12.44□□□□□ -0.42
LINC01004-202ENST00000450686 PORCNQ9H237 461 aa12.44□□□□□ -0.42
LINC01004-202ENST00000450686 ANTXR1Q9H6X2 564 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms