RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 CPSF1Q10570 1443 aaKnown RBP13.95□□□□□ -0.18
UBE3B-204ENST00000449510 KLHL7Q8IXQ5 586 aa13.95□□□□□ -0.18
UBE3B-204ENST00000449510 ZNF526Q8TF50 670 aaPredicted RBP13.95□□□□□ -0.18
UBE3B-204ENST00000449510 ALS2CR12Q96Q35 445 aa13.95□□□□□ -0.18
UBE3B-204ENST00000449510 EPN1Q9Y6I3 576 aaPredicted RBP13.95□□□□□ -0.18
UBE3B-204ENST00000449510 ERCC6L2Q5T890 1561 aa13.95□□□□□ -0.18
UBE3B-204ENST00000449510 NF2P35240 595 aa13.95□□□□□ -0.18
UBE3B-204ENST00000449510 FMR1Q06787 632 aaKnown RBP eCLIP13.95□□□□□ -0.18
UBE3B-204ENST00000449510 TCERG1LQ5VWI1 586 aa13.95□□□□□ -0.18
UBE3B-204ENST00000449510 TYW1BQ6NUM6 668 aa13.95□□□□□ -0.18
UBE3B-204ENST00000449510 DYDC1Q8WWB3 177 aa13.95□□□□□ -0.18
UBE3B-204ENST00000449510 NELFBQ8WX92 580 aa13.95□□□□□ -0.18
UBE3B-204ENST00000449510 JPH2Q9BR39 696 aaPredicted RBP13.95□□□□□ -0.18
UBE3B-204ENST00000449510 TRIM10Q9UDY6 481 aa13.95□□□□□ -0.18
UBE3B-204ENST00000449510 TSPY2A6NKD2 308 aa13.95□□□□□ -0.18
UBE3B-204ENST00000449510 H3BQF6 201 aa13.95□□□□□ -0.18
UBE3B-204ENST00000449510 PSMA7O14818 248 aa13.95□□□□□ -0.18
UBE3B-204ENST00000449510 ECM2O94769 699 aaPredicted RBP13.95□□□□□ -0.18
UBE3B-204ENST00000449510 ICE2Q659A1 982 aa13.95□□□□□ -0.18
UBE3B-204ENST00000449510 APOA5Q6Q788 366 aa13.95□□□□□ -0.18
UBE3B-204ENST00000449510 SRLQ86TD4 932 aa13.95□□□□□ -0.18
UBE3B-204ENST00000449510 ENGASEQ8NFI3 743 aa13.95□□□□□ -0.18
UBE3B-204ENST00000449510 MYO5CQ9NQX4 1742 aa13.94□□□□□ -0.18
UBE3B-204ENST00000449510 ABCC3O15438 1527 aa13.94□□□□□ -0.18
UBE3B-204ENST00000449510 C2orf54Q08AI8 447 aa13.94□□□□□ -0.18
UBE3B-204ENST00000449510 ZMYM1Q5SVZ6 1142 aa13.94□□□□□ -0.18
UBE3B-204ENST00000449510 KRT28Q7Z3Y7 464 aa13.94□□□□□ -0.18
UBE3B-204ENST00000449510 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.94□□□□□ -0.18
UBE3B-204ENST00000449510 BUB1O43683 1085 aa13.94□□□□□ -0.18
UBE3B-204ENST00000449510 FDPSP14324 419 aaKnown RBP13.94□□□□□ -0.18
UBE3B-204ENST00000449510 VAV2P52735 878 aa13.94□□□□□ -0.18
UBE3B-204ENST00000449510 KRT83P78385 493 aa13.94□□□□□ -0.18
UBE3B-204ENST00000449510 GRIN1Q05586 938 aa13.94□□□□□ -0.18
UBE3B-204ENST00000449510 COPRSQ9NQ92 184 aa13.94□□□□□ -0.18
UBE3B-204ENST00000449510 NAA25Q14CX7 972 aa13.94□□□□□ -0.18
UBE3B-204ENST00000449510 CCDC40Q4G0X9 1142 aa13.94□□□□□ -0.18
UBE3B-204ENST00000449510 CCDC91Q7Z6B0 441 aa13.94□□□□□ -0.18
UBE3B-204ENST00000449510 NLRC4Q9NPP4 1024 aa13.94□□□□□ -0.18
UBE3B-204ENST00000449510 MKRN1Q9UHC7 482 aaKnown RBP13.94□□□□□ -0.18
UBE3B-204ENST00000449510 A0A0U1RQJ8 604 aa13.93□□□□□ -0.18
UBE3B-204ENST00000449510 OPA1O60313 960 aa13.93□□□□□ -0.18
UBE3B-204ENST00000449510 SPAG1Q07617 926 aa13.93□□□□□ -0.18
UBE3B-204ENST00000449510 PAK1Q13153 545 aa13.93□□□□□ -0.18
UBE3B-204ENST00000449510 CSGALNACT2Q8N6G5 542 aa13.93□□□□□ -0.18
UBE3B-204ENST00000449510 NOA1Q8NC60 698 aaKnown RBP13.93□□□□□ -0.18
UBE3B-204ENST00000449510 KDRP35968 1356 aa13.93□□□□□ -0.18
UBE3B-204ENST00000449510 SYMPKQ92797 1274 aaKnown RBP13.93□□□□□ -0.18
UBE3B-204ENST00000449510 L2HGDHQ9H9P8 463 aa13.93□□□□□ -0.18
UBE3B-204ENST00000449510 MKNK2Q9HBH9 465 aa13.93□□□□□ -0.18
UBE3B-204ENST00000449510 MRFAP1Q9Y605 127 aa13.93□□□□□ -0.18
UBE3B-204ENST00000449510 HOXB7P09629 217 aa13.93□□□□□ -0.18
UBE3B-204ENST00000449510 E2F5Q15329 346 aa13.93□□□□□ -0.18
UBE3B-204ENST00000449510 C8orf74Q6P047 294 aa13.93□□□□□ -0.18
UBE3B-204ENST00000449510 HEATR3Q7Z4Q2 680 aa13.93□□□□□ -0.18
UBE3B-204ENST00000449510 CPLX4Q7Z7G2 160 aa13.93□□□□□ -0.18
UBE3B-204ENST00000449510 AMOTL1Q8IY63 956 aa13.93□□□□□ -0.18
UBE3B-204ENST00000449510 SMARCC2Q8TAQ2 1214 aa13.93□□□□□ -0.18
UBE3B-204ENST00000449510 FAM71BQ8TC56 605 aa13.93□□□□□ -0.18
UBE3B-204ENST00000449510 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.93□□□□□ -0.18
UBE3B-204ENST00000449510 CAPS2Q9BXY5 557 aa13.93□□□□□ -0.18
UBE3B-204ENST00000449510 YEATS2Q9ULM3 1422 aa13.93□□□□□ -0.18
UBE3B-204ENST00000449510 ARHGEF10O15013 1369 aa13.92□□□□□ -0.18
UBE3B-204ENST00000449510 E7EVH7 732 aa13.92□□□□□ -0.18
UBE3B-204ENST00000449510 KRT2P35908 639 aa13.92□□□□□ -0.18
UBE3B-204ENST00000449510 SOGA3Q5TF21 947 aa13.92□□□□□ -0.18
UBE3B-204ENST00000449510 CCDC121Q6ZUS5 278 aa13.92□□□□□ -0.18
UBE3B-204ENST00000449510 MICALCLQ6ZW33 695 aa13.92□□□□□ -0.18
UBE3B-204ENST00000449510 METTL16Q86W50 562 aaKnown RBP13.92□□□□□ -0.18
UBE3B-204ENST00000449510 C2CD5Q86YS7 1000 aa13.92□□□□□ -0.18
UBE3B-204ENST00000449510 REXO1L1PQ8IX06 675 aa13.92□□□□□ -0.18
UBE3B-204ENST00000449510 SDR42E1Q8WUS8 393 aa13.92□□□□□ -0.18
UBE3B-204ENST00000449510 NOC4LQ9BVI4 516 aaKnown RBP13.92□□□□□ -0.18
UBE3B-204ENST00000449510 SENP2Q9HC62 589 aa13.92□□□□□ -0.18
UBE3B-204ENST00000449510 EXOC1Q9NV70 894 aa13.92□□□□□ -0.18
UBE3B-204ENST00000449510 KCNJ18B7U540 433 aa13.92□□□□□ -0.18
UBE3B-204ENST00000449510 KCNJ12Q14500 433 aa13.92□□□□□ -0.18
UBE3B-204ENST00000449510 FBXW10Q5XX13 1052 aa13.92□□□□□ -0.18
UBE3B-204ENST00000449510 SYNE4Q8N205 404 aa13.92□□□□□ -0.18
UBE3B-204ENST00000449510 OR8K1Q8NGG5 319 aa13.92□□□□□ -0.18
UBE3B-204ENST00000449510 PNKPQ96T60 521 aa13.92□□□□□ -0.18
UBE3B-204ENST00000449510 TCP11L1Q9NUJ3 509 aa13.92□□□□□ -0.18
UBE3B-204ENST00000449510 ROBO2Q9HCK4 1378 aa13.92□□□□□ -0.18
UBE3B-204ENST00000449510 UNC13BO14795 1591 aa13.92□□□□□ -0.18
UBE3B-204ENST00000449510 CRB1P82279 1406 aa13.92□□□□□ -0.18
UBE3B-204ENST00000449510 PRKAB2O43741 272 aa13.92□□□□□ -0.18
UBE3B-204ENST00000449510 RPSAP08865 295 aaKnown RBP13.92□□□□□ -0.18
UBE3B-204ENST00000449510 CDC27P30260 824 aa13.92□□□□□ -0.18
UBE3B-204ENST00000449510 PDCLQ13371 301 aa13.92□□□□□ -0.18
UBE3B-204ENST00000449510 TTF1Q15361 905 aaPredicted RBP13.92□□□□□ -0.18
UBE3B-204ENST00000449510 ADGRG1Q9Y653 693 aa13.92□□□□□ -0.18
UBE3B-204ENST00000449510 SPATA1Q5VX52 437 aa13.91□□□□□ -0.18
UBE3B-204ENST00000449510 RAD9BQ6WBX8 426 aa13.91□□□□□ -0.18
UBE3B-204ENST00000449510 PNMA8AQ86V59 439 aaPredicted RBP13.91□□□□□ -0.18
UBE3B-204ENST00000449510 FUT8Q9BYC5 575 aa13.91□□□□□ -0.18
UBE3B-204ENST00000449510 GGCXP38435 758 aa13.91□□□□□ -0.18
UBE3B-204ENST00000449510 IFT88Q13099 833 aa13.91□□□□□ -0.18
UBE3B-204ENST00000449510 IKQ13123 557 aaPredicted RBP13.91□□□□□ -0.18
UBE3B-204ENST00000449510 UBLCP1Q8WVY7 318 aaPredicted RBP13.91□□□□□ -0.18
UBE3B-204ENST00000449510 ESR2Q92731 530 aa13.91□□□□□ -0.18
UBE3B-204ENST00000449510 KRT23Q9C075 422 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms