RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 CHMLP26374 656 aa10.98□□□□□ -0.65
RFX3-207ENST00000449190 PPIL2Q13356 520 aa10.98□□□□□ -0.65
RFX3-207ENST00000449190 SLFNL1Q499Z3 407 aa10.98□□□□□ -0.65
RFX3-207ENST00000449190 FOXP4Q8IVH2 680 aaPredicted RBP10.98□□□□□ -0.65
RFX3-207ENST00000449190 LCORLQ8N3X6 602 aa10.98□□□□□ -0.65
RFX3-207ENST00000449190 FAM227BQ96M60 508 aa10.98□□□□□ -0.65
RFX3-207ENST00000449190 STRBPQ96SI9 672 aaKnown RBP10.98□□□□□ -0.65
RFX3-207ENST00000449190 PTPN18Q99952 460 aa10.98□□□□□ -0.65
RFX3-207ENST00000449190 RIOK1Q9BRS2 568 aaKnown RBP10.98□□□□□ -0.65
RFX3-207ENST00000449190 OSBPL5Q9H0X9 879 aaPredicted RBP10.98□□□□□ -0.65
RFX3-207ENST00000449190 ATP8A2Q9NTI2 1148 aa10.98□□□□□ -0.65
RFX3-207ENST00000449190 PI4KBQ9UBF8 816 aa10.98□□□□□ -0.65
RFX3-207ENST00000449190 AKAP11Q9UKA4 1901 aa10.97□□□□□ -0.65
RFX3-207ENST00000449190 MYH2Q9UKX2 1941 aa10.97□□□□□ -0.65
RFX3-207ENST00000449190 PATL2C9JE40 543 aaKnown RBP10.97□□□□□ -0.65
RFX3-207ENST00000449190 M0R2C6 588 aa10.97□□□□□ -0.65
RFX3-207ENST00000449190 GPR25O00155 361 aa10.97□□□□□ -0.65
RFX3-207ENST00000449190 IGF2BP3O00425 579 aaKnown RBP eCLIP10.97□□□□□ -0.65
RFX3-207ENST00000449190 EIF5BO60841 1220 aaKnown RBP10.97□□□□□ -0.65
RFX3-207ENST00000449190 CHGBP05060 677 aa10.97□□□□□ -0.65
RFX3-207ENST00000449190 POLR3DP05423 398 aaPredicted RBP10.97□□□□□ -0.65
RFX3-207ENST00000449190 SNAPC2Q13487 334 aa10.97□□□□□ -0.65
RFX3-207ENST00000449190 KIAA1211Q6ZU35 1233 aa10.97□□□□□ -0.65
RFX3-207ENST00000449190 MAPKAPK5Q8IW41 473 aa10.97□□□□□ -0.65
RFX3-207ENST00000449190 SEC62Q99442 399 aaKnown RBP10.97□□□□□ -0.65
RFX3-207ENST00000449190 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.97□□□□□ -0.65
RFX3-207ENST00000449190 ATRNL1Q5VV63 1379 aa10.97□□□□□ -0.65
RFX3-207ENST00000449190 CCL15-CCL14A0A0B4J2E2 113 aa10.96□□□□□ -0.65
RFX3-207ENST00000449190 A0A0D9SFI3 127 aa10.96□□□□□ -0.65
RFX3-207ENST00000449190 CXCL11O14625 94 aa10.96□□□□□ -0.65
RFX3-207ENST00000449190 IRF6O14896 467 aa10.96□□□□□ -0.65
RFX3-207ENST00000449190 MAP3K13O43283 966 aa10.96□□□□□ -0.65
RFX3-207ENST00000449190 HLA-DOAP06340 250 aa10.96□□□□□ -0.65
RFX3-207ENST00000449190 TDO2P48775 406 aa10.96□□□□□ -0.65
RFX3-207ENST00000449190 CCL15Q16663 113 aa10.96□□□□□ -0.65
RFX3-207ENST00000449190 GIMAP6Q6P9H5 292 aa10.96□□□□□ -0.65
RFX3-207ENST00000449190 TTC6Q86TZ1 520 aa10.96□□□□□ -0.65
RFX3-207ENST00000449190 SCYL3Q8IZE3 742 aa10.96□□□□□ -0.65
RFX3-207ENST00000449190 BRI3BPQ8WY22 251 aa10.96□□□□□ -0.65
RFX3-207ENST00000449190 TRIM34Q9BYJ4 488 aa10.96□□□□□ -0.65
RFX3-207ENST00000449190 HERC5Q9UII4 1024 aaKnown RBP10.96□□□□□ -0.65
RFX3-207ENST00000449190 KCNH4Q9UQ05 1017 aa10.96□□□□□ -0.65
RFX3-207ENST00000449190 COL2A1P02458 1487 aaPredicted RBP10.95□□□□□ -0.66
RFX3-207ENST00000449190 CCDC171Q6TFL3 1326 aa10.95□□□□□ -0.66
RFX3-207ENST00000449190 RAD50Q92878 1312 aa10.95□□□□□ -0.66
RFX3-207ENST00000449190 PRKAB2O43741 272 aa10.95□□□□□ -0.66
RFX3-207ENST00000449190 FKTNO75072 461 aa10.95□□□□□ -0.66
RFX3-207ENST00000449190 PTPRAP18433 802 aa10.95□□□□□ -0.66
RFX3-207ENST00000449190 CCDC129Q6ZRS4 1044 aa10.95□□□□□ -0.66
RFX3-207ENST00000449190 METTL16Q86W50 562 aaKnown RBP10.95□□□□□ -0.66
RFX3-207ENST00000449190 SDR42E1Q8WUS8 393 aa10.95□□□□□ -0.66
RFX3-207ENST00000449190 ZNF296Q8WUU4 475 aaPredicted RBP10.95□□□□□ -0.66
RFX3-207ENST00000449190 R3HDMLQ9H3Y0 253 aa10.95□□□□□ -0.66
RFX3-207ENST00000449190 ZCCHC17Q9NP64 241 aaKnown RBP10.95□□□□□ -0.66
RFX3-207ENST00000449190 PICK1Q9NRD5 415 aa10.95□□□□□ -0.66
RFX3-207ENST00000449190 MCM9Q9NXL9 1143 aa10.95□□□□□ -0.66
RFX3-207ENST00000449190 SAP30BPQ9UHR5 308 aaKnown RBP10.95□□□□□ -0.66
RFX3-207ENST00000449190 FLT1P17948 1338 aa10.94□□□□□ -0.66
RFX3-207ENST00000449190 SEC24BO95487 1268 aa10.94□□□□□ -0.66
RFX3-207ENST00000449190 CAP2P40123 477 aa10.94□□□□□ -0.66
RFX3-207ENST00000449190 DGKZQ13574 1117 aa10.94□□□□□ -0.66
RFX3-207ENST00000449190 IFNL3Q8IZI9 196 aa10.94□□□□□ -0.66
RFX3-207ENST00000449190 CRACR2BQ8N4Y2 399 aaPredicted RBP10.94□□□□□ -0.66
RFX3-207ENST00000449190 ESYT1Q9BSJ8 1104 aa10.94□□□□□ -0.66
RFX3-207ENST00000449190 NAPBQ9H115 298 aa10.94□□□□□ -0.66
RFX3-207ENST00000449190 ZFYVE28Q9HCC9 887 aa10.94□□□□□ -0.66
RFX3-207ENST00000449190 CTNNA3Q9UI47 895 aa10.94□□□□□ -0.66
RFX3-207ENST00000449190 PALD1Q9ULE6 856 aa10.94□□□□□ -0.66
RFX3-207ENST00000449190 AFG3L2Q9Y4W6 797 aa10.94□□□□□ -0.66
RFX3-207ENST00000449190 ZHX2Q9Y6X8 837 aa10.94□□□□□ -0.66
RFX3-207ENST00000449190 TTLL13PA6NNM8 815 aa10.93□□□□□ -0.66
RFX3-207ENST00000449190 GSG1L2A8MUP6 293 aa10.93□□□□□ -0.66
RFX3-207ENST00000449190 BTBD19C9JJ37 291 aa10.93□□□□□ -0.66
RFX3-207ENST00000449190 SGSM2O43147 1006 aa10.93□□□□□ -0.66
RFX3-207ENST00000449190 SLC3A2P08195 630 aaKnown RBP10.93□□□□□ -0.66
RFX3-207ENST00000449190 SLURP2P0DP57 97 aa10.93□□□□□ -0.66
RFX3-207ENST00000449190 TAF1CQ15572 869 aaPredicted RBP10.93□□□□□ -0.66
RFX3-207ENST00000449190 PKN2Q16513 984 aaKnown RBP10.93□□□□□ -0.66
RFX3-207ENST00000449190 FASTKD5Q7L8L6 764 aaKnown RBP10.93□□□□□ -0.66
RFX3-207ENST00000449190 CTU1Q7Z7A3 348 aaKnown RBP10.93□□□□□ -0.66
RFX3-207ENST00000449190 ANKRD23Q86SG2 305 aa10.93□□□□□ -0.66
RFX3-207ENST00000449190 ZNF589Q86UQ0 364 aaPredicted RBP10.93□□□□□ -0.66
RFX3-207ENST00000449190 FAM43AQ8N2R8 423 aa10.93□□□□□ -0.66
RFX3-207ENST00000449190 TBC1D2Q9BYX2 928 aa10.93□□□□□ -0.66
RFX3-207ENST00000449190 MCOLN1Q9GZU1 580 aa10.93□□□□□ -0.66
RFX3-207ENST00000449190 DCP1AQ9NPI6 582 aaPredicted RBP10.93□□□□□ -0.66
RFX3-207ENST00000449190 GINM1Q9NU53 330 aa10.93□□□□□ -0.66
RFX3-207ENST00000449190 ARPP21Q9UBL0 812 aaPredicted RBP10.93□□□□□ -0.66
RFX3-207ENST00000449190 AK9Q5TCS8 1911 aa10.92□□□□□ -0.66
RFX3-207ENST00000449190 USP17L5A8MUK1 530 aa10.92□□□□□ -0.66
RFX3-207ENST00000449190 MINDY4BA8MYZ0 360 aa10.92□□□□□ -0.66
RFX3-207ENST00000449190 USP17L12C9JPN9 530 aa10.92□□□□□ -0.66
RFX3-207ENST00000449190 USP17L21D6R901 530 aa10.92□□□□□ -0.66
RFX3-207ENST00000449190 HSPD1P10809 573 aaKnown RBP10.92□□□□□ -0.66
RFX3-207ENST00000449190 CRHR2Q13324 411 aa10.92□□□□□ -0.66
RFX3-207ENST00000449190 ALX1Q15699 326 aa10.92□□□□□ -0.66
RFX3-207ENST00000449190 ABHD8Q96I13 439 aa10.92□□□□□ -0.66
RFX3-207ENST00000449190 DSCC1Q9BVC3 393 aa10.92□□□□□ -0.66
RFX3-207ENST00000449190 ZNF287Q9HBT7 754 aa10.92□□□□□ -0.66
RFX3-207ENST00000449190 MAST2Q6P0Q8 1798 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms