RNA–Protein interactions for RNA: ENST00000449159.5

SMPD4-211, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 635 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-211ENST00000449159 HTTP42858 3142 aa12.71□□□□□ -0.38
SMPD4-211ENST00000449159 ROBO3Q96MS0 1386 aa12.7□□□□□ -0.38
SMPD4-211ENST00000449159 RAD50Q92878 1312 aa12.7□□□□□ -0.38
SMPD4-211ENST00000449159 SGSM2O43147 1006 aa12.7□□□□□ -0.38
SMPD4-211ENST00000449159 CDC45O75419 566 aa12.7□□□□□ -0.38
SMPD4-211ENST00000449159 GDF11O95390 407 aa12.7□□□□□ -0.38
SMPD4-211ENST00000449159 SHMT1P34896 483 aa12.7□□□□□ -0.38
SMPD4-211ENST00000449159 GJA5P36382 358 aa12.7□□□□□ -0.38
SMPD4-211ENST00000449159 MKRN3Q13064 507 aaKnown RBP12.7□□□□□ -0.38
SMPD4-211ENST00000449159 SBK1Q52WX2 424 aa12.7□□□□□ -0.38
SMPD4-211ENST00000449159 FOXP4Q8IVH2 680 aaPredicted RBP12.7□□□□□ -0.38
SMPD4-211ENST00000449159 TRIM34Q9BYJ4 488 aa12.7□□□□□ -0.38
SMPD4-211ENST00000449159 NACAP1Q9BZK3 213 aa12.7□□□□□ -0.38
SMPD4-211ENST00000449159 CSADQ9Y600 493 aa12.7□□□□□ -0.38
SMPD4-211ENST00000449159 RBBP6Q7Z6E9 1792 aaKnown RBP12.7□□□□□ -0.38
SMPD4-211ENST00000449159 GREB1LQ9C091 1923 aaPredicted RBP12.7□□□□□ -0.38
SMPD4-211ENST00000449159 TRPA1O75762 1119 aa12.69□□□□□ -0.38
SMPD4-211ENST00000449159 FGAP02671 866 aa12.69□□□□□ -0.38
SMPD4-211ENST00000449159 MFAP1P55081 439 aaKnown RBP12.69□□□□□ -0.38
SMPD4-211ENST00000449159 NOL9Q5SY16 702 aaKnown RBP12.69□□□□□ -0.38
SMPD4-211ENST00000449159 TATDN1Q6P1N9 297 aa12.69□□□□□ -0.38
SMPD4-211ENST00000449159 CCDC84Q86UT8 332 aaPredicted RBP12.69□□□□□ -0.38
SMPD4-211ENST00000449159 AMOTL1Q8IY63 956 aa12.69□□□□□ -0.38
SMPD4-211ENST00000449159 REM2Q8IYK8 340 aaPredicted RBP12.69□□□□□ -0.38
SMPD4-211ENST00000449159 SCYL3Q8IZE3 742 aa12.69□□□□□ -0.38
SMPD4-211ENST00000449159 RUFY2Q8WXA3 655 aa12.69□□□□□ -0.38
SMPD4-211ENST00000449159 OPTNQ96CV9 577 aa12.69□□□□□ -0.38
SMPD4-211ENST00000449159 SLC10A4Q96EP9 437 aa12.69□□□□□ -0.38
SMPD4-211ENST00000449159 RNF186Q9NXI6 227 aa12.69□□□□□ -0.38
SMPD4-211ENST00000449159 ZMYM6O95789 1325 aa12.68□□□□□ -0.38
SMPD4-211ENST00000449159 UNCXA6NJT0 531 aa12.68□□□□□ -0.38
SMPD4-211ENST00000449159 CTNND1O60716 968 aaKnown RBP12.68□□□□□ -0.38
SMPD4-211ENST00000449159 CAP2P40123 477 aa12.68□□□□□ -0.38
SMPD4-211ENST00000449159 SOX10P56693 466 aa12.68□□□□□ -0.38
SMPD4-211ENST00000449159 PTH1RQ03431 593 aa12.68□□□□□ -0.38
SMPD4-211ENST00000449159 ALX1Q15699 326 aa12.68□□□□□ -0.38
SMPD4-211ENST00000449159 C16orf86Q6ZW13 317 aa12.68□□□□□ -0.38
SMPD4-211ENST00000449159 OTUD5Q96G74 571 aa12.68□□□□□ -0.38
SMPD4-211ENST00000449159 WNK4Q96J92 1243 aa12.68□□□□□ -0.38
SMPD4-211ENST00000449159 ESYT1Q9BSJ8 1104 aa12.68□□□□□ -0.38
SMPD4-211ENST00000449159 SPDYE5A6NIY4 337 aa12.67□□□□□ -0.38
SMPD4-211ENST00000449159 PRDM1O75626 825 aa12.67□□□□□ -0.38
SMPD4-211ENST00000449159 PTPRAP18433 802 aa12.67□□□□□ -0.38
SMPD4-211ENST00000449159 CDK8P49336 464 aa12.67□□□□□ -0.38
SMPD4-211ENST00000449159 HAND2P61296 217 aa12.67□□□□□ -0.38
SMPD4-211ENST00000449159 CTDSPL2Q05D32 466 aa12.67□□□□□ -0.38
SMPD4-211ENST00000449159 PPARAQ07869 468 aa12.67□□□□□ -0.38
SMPD4-211ENST00000449159 SPRYD7Q5W111 196 aa12.67□□□□□ -0.38
SMPD4-211ENST00000449159 CTU1Q7Z7A3 348 aaKnown RBP12.67□□□□□ -0.38
SMPD4-211ENST00000449159 DSCC1Q9BVC3 393 aa12.67□□□□□ -0.38
SMPD4-211ENST00000449159 NBPF3Q9H094 633 aa12.67□□□□□ -0.38
SMPD4-211ENST00000449159 PICK1Q9NRD5 415 aa12.67□□□□□ -0.38
SMPD4-211ENST00000449159 SWAP70Q9UH65 585 aa12.67□□□□□ -0.38
SMPD4-211ENST00000449159 ZBTB21Q9ULJ3 1066 aa12.67□□□□□ -0.38
SMPD4-211ENST00000449159 TACC3Q9Y6A5 838 aa12.67□□□□□ -0.38
SMPD4-211ENST00000449159 CENPFP49454 3210 aa12.66□□□□□ -0.38
SMPD4-211ENST00000449159 IRF6O14896 467 aa12.66□□□□□ -0.38
SMPD4-211ENST00000449159 GH2P01242 217 aa12.66□□□□□ -0.38
SMPD4-211ENST00000449159 AKR1B1P15121 316 aa12.66□□□□□ -0.38
SMPD4-211ENST00000449159 CERKLQ49MI3 558 aaPredicted RBP12.66□□□□□ -0.38
SMPD4-211ENST00000449159 ERO1BQ86YB8 467 aa12.66□□□□□ -0.38
SMPD4-211ENST00000449159 INCENPQ9NQS7 918 aa12.66□□□□□ -0.38
SMPD4-211ENST00000449159 MYH4Q9Y623 1939 aa12.66□□□□□ -0.38
SMPD4-211ENST00000449159 LOC285556D6RIA3 1793 aa12.66□□□□□ -0.38
SMPD4-211ENST00000449159 ZBTB48P10074 688 aaPredicted RBP12.65□□□□□ -0.38
SMPD4-211ENST00000449159 RASA1P20936 1047 aa12.65□□□□□ -0.38
SMPD4-211ENST00000449159 PPIL2Q13356 520 aa12.65□□□□□ -0.38
SMPD4-211ENST00000449159 ABCB5Q2M3G0 1257 aa12.65□□□□□ -0.38
SMPD4-211ENST00000449159 CLEC10AQ8IUN9 316 aa12.65□□□□□ -0.38
SMPD4-211ENST00000449159 TBC1D10CQ8IV04 446 aa12.65□□□□□ -0.38
SMPD4-211ENST00000449159 LSG1Q9H089 658 aaKnown RBP12.65□□□□□ -0.38
SMPD4-211ENST00000449159 ANAPC4Q9UJX5 808 aa12.65□□□□□ -0.38
SMPD4-211ENST00000449159 ZHX2Q9Y6X8 837 aa12.65□□□□□ -0.38
SMPD4-211ENST00000449159 MPHOSPH10O00566 681 aaKnown RBP12.64□□□□□ -0.39
SMPD4-211ENST00000449159 ASNSP08243 561 aa12.64□□□□□ -0.39
SMPD4-211ENST00000449159 GUCY1A2P33402 732 aa12.64□□□□□ -0.39
SMPD4-211ENST00000449159 PPATQ06203 517 aa12.64□□□□□ -0.39
SMPD4-211ENST00000449159 SEPT2Q15019 361 aa12.64□□□□□ -0.39
SMPD4-211ENST00000449159 CASC1Q6TDU7 716 aa12.64□□□□□ -0.39
SMPD4-211ENST00000449159 NKX2-3Q8TAU0 364 aa12.64□□□□□ -0.39
SMPD4-211ENST00000449159 MKNK2Q9HBH9 465 aa12.64□□□□□ -0.39
SMPD4-211ENST00000449159 ANO2Q9NQ90 1003 aa12.64□□□□□ -0.39
SMPD4-211ENST00000449159 PCDH10Q9P2E7 1040 aa12.64□□□□□ -0.39
SMPD4-211ENST00000449159 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.64□□□□□ -0.39
SMPD4-211ENST00000449159 AFG3L2Q9Y4W6 797 aa12.64□□□□□ -0.39
SMPD4-211ENST00000449159 TRIM75PA6NK02 468 aa12.63□□□□□ -0.39
SMPD4-211ENST00000449159 RAB3GAP1Q15042 981 aa12.63□□□□□ -0.39
SMPD4-211ENST00000449159 MAP4K1Q92918 833 aa12.63□□□□□ -0.39
SMPD4-211ENST00000449159 MS4A4AQ96JQ5 239 aa12.63□□□□□ -0.39
SMPD4-211ENST00000449159 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.63□□□□□ -0.39
SMPD4-211ENST00000449159 TAOK2Q9UL54 1235 aa12.63□□□□□ -0.39
SMPD4-211ENST00000449159 KCNH4Q9UQ05 1017 aa12.63□□□□□ -0.39
SMPD4-211ENST00000449159 TAF6LQ9Y6J9 622 aa12.63□□□□□ -0.39
SMPD4-211ENST00000449159 NEDD4P46934 1319 aa12.62□□□□□ -0.39
SMPD4-211ENST00000449159 USP17L5A8MUK1 530 aa12.62□□□□□ -0.39
SMPD4-211ENST00000449159 ZNF213O14771 459 aa12.62□□□□□ -0.39
SMPD4-211ENST00000449159 SLC3A2P08195 630 aaKnown RBP12.62□□□□□ -0.39
SMPD4-211ENST00000449159 PDE4BQ07343 736 aa12.62□□□□□ -0.39
SMPD4-211ENST00000449159 SPP2Q13103 211 aa12.62□□□□□ -0.39
SMPD4-211ENST00000449159 PKN2Q16513 984 aaKnown RBP12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms