RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 RANBP6O60518 1105 aaKnown RBP16.58■□□□□ 0.24
SHMT2-203ENST00000449049 LDHDQ86WU2 507 aa16.58■□□□□ 0.24
SHMT2-203ENST00000449049 FBXL16Q8N461 479 aa16.58■□□□□ 0.24
SHMT2-203ENST00000449049 PDRG1Q9NUG6 133 aa16.58■□□□□ 0.24
SHMT2-203ENST00000449049 FAM47AQ5JRC9 791 aa16.57■□□□□ 0.24
SHMT2-203ENST00000449049 CDC37L1Q7L3B6 337 aa16.57■□□□□ 0.24
SHMT2-203ENST00000449049 CHST3Q7LGC8 479 aa16.57■□□□□ 0.24
SHMT2-203ENST00000449049 TCEANC2Q96MN5 208 aa16.57■□□□□ 0.24
SHMT2-203ENST00000449049 TSPY2A6NKD2 308 aa16.57■□□□□ 0.24
SHMT2-203ENST00000449049 ST18O60284 1047 aa16.57■□□□□ 0.24
SHMT2-203ENST00000449049 TFAP4Q01664 338 aa16.57■□□□□ 0.24
SHMT2-203ENST00000449049 PRAMEF18Q5VWM3 479 aa16.57■□□□□ 0.24
SHMT2-203ENST00000449049 USP48Q86UV5 1035 aa16.57■□□□□ 0.24
SHMT2-203ENST00000449049 CCDC17Q96LX7 622 aa16.57■□□□□ 0.24
SHMT2-203ENST00000449049 AGXT2Q9BYV1 514 aa16.57■□□□□ 0.24
SHMT2-203ENST00000449049 CLEC11AQ9Y240 323 aa16.57■□□□□ 0.24
SHMT2-203ENST00000449049 SUPT20HL1Q3ZLR7 823 aa16.56■□□□□ 0.24
SHMT2-203ENST00000449049 DCAF15Q66K64 600 aa16.56■□□□□ 0.24
SHMT2-203ENST00000449049 MIGA2Q7L4E1 593 aa16.56■□□□□ 0.24
SHMT2-203ENST00000449049 NEDD1Q8NHV4 660 aa16.56■□□□□ 0.24
SHMT2-203ENST00000449049 TMEM87BQ96K49 555 aa16.56■□□□□ 0.24
SHMT2-203ENST00000449049 TCP11L1Q9NUJ3 509 aa16.56■□□□□ 0.24
SHMT2-203ENST00000449049 TSPY3P0CV98 308 aa16.55■□□□□ 0.24
SHMT2-203ENST00000449049 TSPY8P0CW00 308 aa16.55■□□□□ 0.24
SHMT2-203ENST00000449049 AKR1B1P15121 316 aa16.55■□□□□ 0.24
SHMT2-203ENST00000449049 CERKLQ49MI3 558 aaPredicted RBP16.55■□□□□ 0.24
SHMT2-203ENST00000449049 SNX21Q969T3 373 aa16.55■□□□□ 0.24
SHMT2-203ENST00000449049 GLIS2Q9BZE0 524 aaPredicted RBP16.55■□□□□ 0.24
SHMT2-203ENST00000449049 CD2BP2O95400 341 aaKnown RBP16.55■□□□□ 0.24
SHMT2-203ENST00000449049 AK2P54819 239 aa16.55■□□□□ 0.24
SHMT2-203ENST00000449049 TOB2Q14106 344 aaPredicted RBP16.55■□□□□ 0.24
SHMT2-203ENST00000449049 RRP1BQ14684 758 aaKnown RBP16.55■□□□□ 0.24
SHMT2-203ENST00000449049 MAP1SQ66K74 1059 aaPredicted RBP16.55■□□□□ 0.24
SHMT2-203ENST00000449049 Q6ZUG5 572 aa16.55■□□□□ 0.24
SHMT2-203ENST00000449049 IQCA1Q86XH1 822 aa16.55■□□□□ 0.24
SHMT2-203ENST00000449049 IGDCC4Q8TDY8 1250 aa16.55■□□□□ 0.24
SHMT2-203ENST00000449049 CDCA5Q96FF9 252 aa16.55■□□□□ 0.24
SHMT2-203ENST00000449049 ZSCAN10Q96SZ4 725 aaPredicted RBP16.55■□□□□ 0.24
SHMT2-203ENST00000449049 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.55■□□□□ 0.245e-8■■■□□ 18.8
SHMT2-203ENST00000449049 LRRC2Q9BYS8 371 aa16.55■□□□□ 0.24
SHMT2-203ENST00000449049 PAPPA2Q9BXP8 1791 aa16.55■□□□□ 0.24
SHMT2-203ENST00000449049 PHF20L1A8MW92 1017 aa16.54■□□□□ 0.24
SHMT2-203ENST00000449049 SH2B2O14492 632 aaPredicted RBP16.54■□□□□ 0.24
SHMT2-203ENST00000449049 DLK2Q6UY11 383 aa16.54■□□□□ 0.24
SHMT2-203ENST00000449049 ZKSCAN3Q9BRR0 538 aa16.54■□□□□ 0.24
SHMT2-203ENST00000449049 UBAC1Q9BSL1 405 aa16.54■□□□□ 0.24
SHMT2-203ENST00000449049 ZNF341Q9BYN7 854 aa16.54■□□□□ 0.24
SHMT2-203ENST00000449049 IL17RBQ9NRM6 502 aa16.54■□□□□ 0.24
SHMT2-203ENST00000449049 IGKV6D-41A0A0C4DH26 115 aa16.54■□□□□ 0.24
SHMT2-203ENST00000449049 SART3Q15020 963 aaKnown RBP16.54■□□□□ 0.24
SHMT2-203ENST00000449049 ANKRD1Q15327 319 aa16.54■□□□□ 0.24
SHMT2-203ENST00000449049 SEC23AQ15436 765 aa16.54■□□□□ 0.24
SHMT2-203ENST00000449049 GPBP1L1Q9HC44 474 aaPredicted RBP16.54■□□□□ 0.24
SHMT2-203ENST00000449049 ZNF112Q9UJU3 913 aa16.54■□□□□ 0.24
SHMT2-203ENST00000449049 ANGEL1Q9UNK9 670 aaKnown RBP16.54■□□□□ 0.24
SHMT2-203ENST00000449049 TNKSO95271 1327 aa16.54■□□□□ 0.24
SHMT2-203ENST00000449049 ATAD5Q96QE3 1844 aa16.53■□□□□ 0.24
SHMT2-203ENST00000449049 IFIT3O14879 490 aaKnown RBP16.53■□□□□ 0.24
SHMT2-203ENST00000449049 ANP32AP39687 249 aaKnown RBP16.53■□□□□ 0.24
SHMT2-203ENST00000449049 LIFRP42702 1097 aa16.53■□□□□ 0.24
SHMT2-203ENST00000449049 NOVP48745 357 aa16.53■□□□□ 0.24
SHMT2-203ENST00000449049 MCM2P49736 904 aa16.53■□□□□ 0.24
SHMT2-203ENST00000449049 CCDC178Q5BJE1 867 aa16.53■□□□□ 0.24
SHMT2-203ENST00000449049 TMEM67Q5HYA8 995 aa16.53■□□□□ 0.24
SHMT2-203ENST00000449049 LY9Q9HBG7 655 aa16.53■□□□□ 0.24
SHMT2-203ENST00000449049 NMT2O60551 498 aa16.52■□□□□ 0.24
SHMT2-203ENST00000449049 ABCB5Q2M3G0 1257 aa16.52■□□□□ 0.24
SHMT2-203ENST00000449049 ENAHQ8N8S7 591 aaPredicted RBP16.52■□□□□ 0.24
SHMT2-203ENST00000449049 GPHNQ9NQX3 736 aaPredicted RBP16.52■□□□□ 0.24
SHMT2-203ENST00000449049 ERICH2A1L162 156 aa16.52■□□□□ 0.23
SHMT2-203ENST00000449049 GDF11O95390 407 aa16.52■□□□□ 0.23
SHMT2-203ENST00000449049 CAP2P40123 477 aa16.52■□□□□ 0.23
SHMT2-203ENST00000449049 FGD1P98174 961 aa16.52■□□□□ 0.23
SHMT2-203ENST00000449049 TMEM179Q6ZVK1 233 aa16.52■□□□□ 0.23
SHMT2-203ENST00000449049 SGMS1Q86VZ5 419 aa16.52■□□□□ 0.23
SHMT2-203ENST00000449049 ANKS1AQ92625 1134 aa16.52■□□□□ 0.23
SHMT2-203ENST00000449049 BRF1Q92994 677 aa16.52■□□□□ 0.23
SHMT2-203ENST00000449049 DOCK1Q14185 1865 aa16.52■□□□□ 0.23
SHMT2-203ENST00000449049 MPHOSPH10O00566 681 aaKnown RBP16.51■□□□□ 0.23
SHMT2-203ENST00000449049 NF2P35240 595 aa16.51■□□□□ 0.23
SHMT2-203ENST00000449049 EVCP57679 992 aa16.51■□□□□ 0.23
SHMT2-203ENST00000449049 JAG1P78504 1218 aa16.51■□□□□ 0.23
SHMT2-203ENST00000449049 WTAPQ15007 396 aa16.51■□□□□ 0.23
SHMT2-203ENST00000449049 SHROOM1Q2M3G4 852 aaPredicted RBP16.51■□□□□ 0.23
SHMT2-203ENST00000449049 RCSD1Q6JBY9 416 aa16.51■□□□□ 0.23
SHMT2-203ENST00000449049 CHADLQ6NUI6 762 aa16.51■□□□□ 0.23
SHMT2-203ENST00000449049 DGKHQ86XP1 1220 aa16.51■□□□□ 0.23
SHMT2-203ENST00000449049 KLRG1Q96E93 195 aa16.51■□□□□ 0.23
SHMT2-203ENST00000449049 CTNND1O60716 968 aaKnown RBP16.51■□□□□ 0.23
SHMT2-203ENST00000449049 GUCY1A2P33402 732 aa16.51■□□□□ 0.23
SHMT2-203ENST00000449049 TMTC2Q8N394 836 aa16.51■□□□□ 0.23
SHMT2-203ENST00000449049 CEP95Q96GE4 821 aa16.51■□□□□ 0.23
SHMT2-203ENST00000449049 SENP2Q9HC62 589 aa16.51■□□□□ 0.23
SHMT2-203ENST00000449049 CABP5Q9NP86 173 aa16.51■□□□□ 0.23
SHMT2-203ENST00000449049 GINM1Q9NU53 330 aa16.51■□□□□ 0.23
SHMT2-203ENST00000449049 OTOFQ9HC10 1997 aa16.5■□□□□ 0.23
SHMT2-203ENST00000449049 KIF3CO14782 793 aa16.5■□□□□ 0.23
SHMT2-203ENST00000449049 USP2O75604 605 aaPredicted RBP16.5■□□□□ 0.23
SHMT2-203ENST00000449049 GH2P01242 217 aa16.5■□□□□ 0.23
SHMT2-203ENST00000449049 TBC1D2Q9BYX2 928 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms