RNA–Protein interactions for RNA: ENST00000447608.1

COL11A1-205, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-205ENST00000447608 KCNQ2O43526 872 aa8.68□□□□□ -1.02
COL11A1-205ENST00000447608 RAPGEF3O95398 923 aa8.68□□□□□ -1.02
COL11A1-205ENST00000447608 ALAS2P22557 587 aa8.68□□□□□ -1.02
COL11A1-205ENST00000447608 STAT3P40763 770 aa8.68□□□□□ -1.02
COL11A1-205ENST00000447608 GAS6Q14393 721 aa8.68□□□□□ -1.02
COL11A1-205ENST00000447608 SV2CQ496J9 727 aa8.68□□□□□ -1.02
COL11A1-205ENST00000447608 ZC3H12AQ5D1E8 599 aaKnown RBP8.68□□□□□ -1.02
COL11A1-205ENST00000447608 FMNL3Q8IVF7 1028 aa8.68□□□□□ -1.02
COL11A1-205ENST00000447608 UBR7Q8N806 425 aa8.68□□□□□ -1.02
COL11A1-205ENST00000447608 NANOS1Q8WY41 292 aaKnown RBP8.68□□□□□ -1.02
COL11A1-205ENST00000447608 SGSM3Q96HU1 749 aa8.68□□□□□ -1.02
COL11A1-205ENST00000447608 EXOC2Q96KP1 924 aa8.68□□□□□ -1.02
COL11A1-205ENST00000447608 USP26Q9BXU7 913 aa8.68□□□□□ -1.02
COL11A1-205ENST00000447608 FAM86C1Q9NVL1 165 aa8.68□□□□□ -1.02
COL11A1-205ENST00000447608 GMPR2Q9P2T1 348 aaKnown RBP8.68□□□□□ -1.02
COL11A1-205ENST00000447608 GGA1Q9UJY5 639 aa8.68□□□□□ -1.02
COL11A1-205ENST00000447608 HIF3AQ9Y2N7 669 aa8.68□□□□□ -1.02
COL11A1-205ENST00000447608 CCDC163A0A0D9SF12 145 aa8.67□□□□□ -1.02
COL11A1-205ENST00000447608 RFPL3O75679 317 aa8.67□□□□□ -1.02
COL11A1-205ENST00000447608 AFF1P51825 1210 aaKnown RBP8.67□□□□□ -1.02
COL11A1-205ENST00000447608 ETF1P62495 437 aaKnown RBP8.67□□□□□ -1.02
COL11A1-205ENST00000447608 FAM209AQ5JX71 171 aa8.67□□□□□ -1.02
COL11A1-205ENST00000447608 C20orf204Q6ZNR8 217 aa8.67□□□□□ -1.02
COL11A1-205ENST00000447608 DDX42Q86XP3 938 aaKnown RBP eCLIP8.67□□□□□ -1.02
COL11A1-205ENST00000447608 KISS1RQ969F8 398 aaPredicted RBP8.67□□□□□ -1.02
COL11A1-205ENST00000447608 CEP89Q96ST8 783 aa8.67□□□□□ -1.02
COL11A1-205ENST00000447608 WNT10AQ9GZT5 417 aa8.67□□□□□ -1.02
COL11A1-205ENST00000447608 CAAP1Q9H8G2 361 aa8.67□□□□□ -1.02
COL11A1-205ENST00000447608 NCOA5Q9HCD5 579 aaKnown RBP8.67□□□□□ -1.02
COL11A1-205ENST00000447608 A0A1W2PQU0 124 aa8.66□□□□□ -1.02
COL11A1-205ENST00000447608 AGRPO00253 132 aa8.66□□□□□ -1.02
COL11A1-205ENST00000447608 PDE8AO60658 829 aa8.66□□□□□ -1.02
COL11A1-205ENST00000447608 NLRP12P59046 1061 aa8.66□□□□□ -1.02
COL11A1-205ENST00000447608 HNRNPUQ00839 825 aaKnown RBP eCLIP8.66□□□□□ -1.02
COL11A1-205ENST00000447608 RING1Q06587 406 aa8.66□□□□□ -1.02
COL11A1-205ENST00000447608 FAM13CQ8NE31 585 aa8.66□□□□□ -1.02
COL11A1-205ENST00000447608 CDC6Q99741 560 aa8.66□□□□□ -1.02
COL11A1-205ENST00000447608 DHRS4Q9BTZ2 278 aa8.66□□□□□ -1.02
COL11A1-205ENST00000447608 ARHGEF4Q9NR80 690 aa8.66□□□□□ -1.02
COL11A1-205ENST00000447608 TJP2Q9UDY2 1190 aa8.66□□□□□ -1.02
COL11A1-205ENST00000447608 AOC2O75106 756 aa8.65□□□□□ -1.02
COL11A1-205ENST00000447608 DLGAP3O95886 979 aa8.65□□□□□ -1.02
COL11A1-205ENST00000447608 TP53P04637 393 aaPredicted RBP8.65□□□□□ -1.02
COL11A1-205ENST00000447608 MAP2K3P46734 347 aa8.65□□□□□ -1.02
COL11A1-205ENST00000447608 NFKB2Q00653 900 aa8.65□□□□□ -1.02
COL11A1-205ENST00000447608 BRDTQ58F21 947 aaPredicted RBP8.65□□□□□ -1.02
COL11A1-205ENST00000447608 CT47A1Q5JQC4 288 aaPredicted RBP8.65□□□□□ -1.02
COL11A1-205ENST00000447608 PPM1JQ5JR12 505 aa8.65□□□□□ -1.02
COL11A1-205ENST00000447608 YOD1Q5VVQ6 348 aaPredicted RBP8.65□□□□□ -1.02
COL11A1-205ENST00000447608 PPFIBP1Q86W92 1011 aa8.65□□□□□ -1.02
COL11A1-205ENST00000447608 MCATQ8IVS2 390 aaKnown RBP8.65□□□□□ -1.02
COL11A1-205ENST00000447608 TMEM192Q8IY95 271 aa8.65□□□□□ -1.02
COL11A1-205ENST00000447608 CLUHP3Q96NS8 147 aa8.65□□□□□ -1.02
COL11A1-205ENST00000447608 KIF2CQ99661 725 aa8.65□□□□□ -1.02
COL11A1-205ENST00000447608 WDR18Q9BV38 432 aa8.65□□□□□ -1.02
COL11A1-205ENST00000447608 THRAP3Q9Y2W1 955 aaKnown RBP8.65□□□□□ -1.02
COL11A1-205ENST00000447608 MRPS23Q9Y3D9 190 aaKnown RBP8.65□□□□□ -1.02
COL11A1-205ENST00000447608 PCDHGC5Q9Y5F6 944 aa8.65□□□□□ -1.02
COL11A1-205ENST00000447608 LOC100289279A0A1B0GTE1 492 aa8.64□□□□□ -1.03
COL11A1-205ENST00000447608 TM4SF5O14894 197 aa8.64□□□□□ -1.03
COL11A1-205ENST00000447608 PLD2O14939 933 aa8.64□□□□□ -1.03
COL11A1-205ENST00000447608 DDX3YO15523 660 aaKnown RBP8.64□□□□□ -1.03
COL11A1-205ENST00000447608 ALBP02768 609 aa8.64□□□□□ -1.03
COL11A1-205ENST00000447608 SLFN14P0C7P3 912 aa8.64□□□□□ -1.03
COL11A1-205ENST00000447608 SOX5P35711 763 aa8.64□□□□□ -1.03
COL11A1-205ENST00000447608 CCNFP41002 786 aa8.64□□□□□ -1.03
COL11A1-205ENST00000447608 PMS1P54277 932 aaKnown RBP8.64□□□□□ -1.03
COL11A1-205ENST00000447608 SUZ12Q15022 739 aaKnown RBP8.64□□□□□ -1.03
COL11A1-205ENST00000447608 BBS9Q3SYG4 887 aa8.64□□□□□ -1.03
COL11A1-205ENST00000447608 TDRD10Q5VZ19 366 aaKnown RBP8.64□□□□□ -1.03
COL11A1-205ENST00000447608 C8orf86Q6ZUL3 223 aa8.64□□□□□ -1.03
COL11A1-205ENST00000447608 WFDC8Q8IUA0 241 aa8.64□□□□□ -1.03
COL11A1-205ENST00000447608 PHACTR4Q8IZ21 702 aa8.64□□□□□ -1.03
COL11A1-205ENST00000447608 DHRS1Q96LJ7 313 aa8.64□□□□□ -1.03
COL11A1-205ENST00000447608 SLC6A18Q96N87 628 aa8.64□□□□□ -1.03
COL11A1-205ENST00000447608 PICK1Q9NRD5 415 aa8.64□□□□□ -1.03
COL11A1-205ENST00000447608 SUSD2Q9UGT4 822 aa8.64□□□□□ -1.03
COL11A1-205ENST00000447608 NSFL1CQ9UNZ2 370 aaKnown RBP8.64□□□□□ -1.03
COL11A1-205ENST00000447608 TRAV20A0A0B4J274 112 aa8.63□□□□□ -1.03
COL11A1-205ENST00000447608 ANKRD34BA5PLL1 514 aa8.63□□□□□ -1.03
COL11A1-205ENST00000447608 MAP4K4O95819 1239 aaPredicted RBP8.63□□□□□ -1.03
COL11A1-205ENST00000447608 ZNF143P52747 638 aaPredicted RBP8.63□□□□□ -1.03
COL11A1-205ENST00000447608 YARSP54577 528 aaKnown RBP8.63□□□□□ -1.03
COL11A1-205ENST00000447608 EXOSC10Q01780 885 aaKnown RBP8.63□□□□□ -1.03
COL11A1-205ENST00000447608 FAM50AQ14320 339 aaKnown RBP8.63□□□□□ -1.03
COL11A1-205ENST00000447608 FNDC3BQ53EP0 1204 aaKnown RBP8.63□□□□□ -1.03
COL11A1-205ENST00000447608 RNF180Q86T96 592 aa8.63□□□□□ -1.03
COL11A1-205ENST00000447608 CERS3Q8IU89 383 aa8.63□□□□□ -1.03
COL11A1-205ENST00000447608 SLFN12Q8IYM2 578 aa8.63□□□□□ -1.03
COL11A1-205ENST00000447608 KLHL23Q8NBE8 558 aa8.63□□□□□ -1.03
COL11A1-205ENST00000447608 GALNT11Q8NCW6 608 aa8.63□□□□□ -1.03
COL11A1-205ENST00000447608 TMEM87BQ96K49 555 aa8.63□□□□□ -1.03
COL11A1-205ENST00000447608 APBA2Q99767 749 aa8.63□□□□□ -1.03
COL11A1-205ENST00000447608 MBIPQ9NS73 344 aa8.63□□□□□ -1.03
COL11A1-205ENST00000447608 TRBV23-1A0A0A0MS06 115 aa8.62□□□□□ -1.03
COL11A1-205ENST00000447608 GSG1L2A8MUP6 293 aa8.62□□□□□ -1.03
COL11A1-205ENST00000447608 RGS13O14921 159 aa8.62□□□□□ -1.03
COL11A1-205ENST00000447608 LILRB5O75023 590 aa8.62□□□□□ -1.03
COL11A1-205ENST00000447608 ADAM11O75078 769 aa8.62□□□□□ -1.03
COL11A1-205ENST00000447608 UBOX5O94941 541 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 743.6 ms