RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 CERKLQ49MI3 558 aaPredicted RBP21.28■■□□□ 1
TRAPPC4-203ENST00000447216 ZNF444Q8N0Y2 327 aaPredicted RBP21.28■■□□□ 1
TRAPPC4-203ENST00000447216 WRNIP1Q96S55 665 aa21.28■■□□□ 1
TRAPPC4-203ENST00000447216 ZNF287Q9HBT7 754 aa21.28■■□□□ 1
TRAPPC4-203ENST00000447216 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.28■■□□□ 1
TRAPPC4-203ENST00000447216 PASKQ96RG2 1323 aa21.28■■□□□ 1
TRAPPC4-203ENST00000447216 KDM4AO75164 1064 aa21.27■■□□□ 1
TRAPPC4-203ENST00000447216 PCP11498 1178 aaKnown RBP21.27■■□□□ 1
TRAPPC4-203ENST00000447216 CPA1P15085 419 aa21.27■■□□□ 1
TRAPPC4-203ENST00000447216 RBM25P49756 843 aaKnown RBP21.27■■□□□ 1
TRAPPC4-203ENST00000447216 TRDNQ13061 729 aa21.27■■□□□ 1
TRAPPC4-203ENST00000447216 KRT32Q14532 448 aa21.27■■□□□ 1
TRAPPC4-203ENST00000447216 RALYLQ86SE5 291 aaKnown RBP21.27■■□□□ 1
TRAPPC4-203ENST00000447216 NCOA7Q8NI08 942 aa21.27■■□□□ 1
TRAPPC4-203ENST00000447216 KLRG1Q96E93 195 aa21.27■■□□□ 1
TRAPPC4-203ENST00000447216 KRT23Q9C075 422 aa21.27■■□□□ 1
TRAPPC4-203ENST00000447216 CNNM2Q9H8M5 875 aa21.27■■□□□ 1
TRAPPC4-203ENST00000447216 ZNF112Q9UJU3 913 aa21.27■■□□□ 1
TRAPPC4-203ENST00000447216 UBE2Q2LH0YL09 131 aa21.26■□□□□ 0.99
TRAPPC4-203ENST00000447216 MPHOSPH10O00566 681 aaKnown RBP21.26■□□□□ 0.99
TRAPPC4-203ENST00000447216 TFAP4Q01664 338 aa21.26■□□□□ 0.99
TRAPPC4-203ENST00000447216 CST9Q5W186 159 aa21.26■□□□□ 0.99
TRAPPC4-203ENST00000447216 CYB5R4Q7L1T6 521 aa21.26■□□□□ 0.99
TRAPPC4-203ENST00000447216 MB21D2Q8IYB1 491 aaPredicted RBP21.26■□□□□ 0.99
TRAPPC4-203ENST00000447216 ZKSCAN4Q969J2 545 aaPredicted RBP21.26■□□□□ 0.99
TRAPPC4-203ENST00000447216 NEK1Q96PY6 1258 aa21.26■□□□□ 0.99
TRAPPC4-203ENST00000447216 GBA2Q9HCG7 927 aaPredicted RBP21.26■□□□□ 0.99
TRAPPC4-203ENST00000447216 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.26■□□□□ 0.99
TRAPPC4-203ENST00000447216 TAOK2Q9UL54 1235 aa21.26■□□□□ 0.99
TRAPPC4-203ENST00000447216 PHIPQ8WWQ0 1821 aa21.26■□□□□ 0.99
TRAPPC4-203ENST00000447216 TSPY2A6NKD2 308 aa21.25■□□□□ 0.99
TRAPPC4-203ENST00000447216 GH2P01242 217 aa21.25■□□□□ 0.99
TRAPPC4-203ENST00000447216 CAP2P40123 477 aa21.25■□□□□ 0.99
TRAPPC4-203ENST00000447216 IREB2P48200 963 aaKnown RBP21.25■□□□□ 0.99
TRAPPC4-203ENST00000447216 ANAPC15P60006 121 aa21.25■□□□□ 0.99
TRAPPC4-203ENST00000447216 ABCB5Q2M3G0 1257 aa21.25■□□□□ 0.99
TRAPPC4-203ENST00000447216 CHST3Q7LGC8 479 aa21.25■□□□□ 0.99
TRAPPC4-203ENST00000447216 ARMC9Q7Z3E5 817 aa21.25■□□□□ 0.99
TRAPPC4-203ENST00000447216 DDX55Q8NHQ9 600 aaKnown RBP eCLIP21.25■□□□□ 0.99
TRAPPC4-203ENST00000447216 ESR2Q92731 530 aa21.25■□□□□ 0.99
TRAPPC4-203ENST00000447216 ZSWIM5Q9P217 1185 aa21.25■□□□□ 0.99
TRAPPC4-203ENST00000447216 TSPY3P0CV98 308 aa21.24■□□□□ 0.99
TRAPPC4-203ENST00000447216 TSPY8P0CW00 308 aa21.24■□□□□ 0.99
TRAPPC4-203ENST00000447216 CASTP20810 708 aaKnown RBP21.24■□□□□ 0.99
TRAPPC4-203ENST00000447216 ANTXR2P58335 489 aa21.24■□□□□ 0.99
TRAPPC4-203ENST00000447216 MAP3K9P80192 1104 aa21.24■□□□□ 0.99
TRAPPC4-203ENST00000447216 FSTL1Q12841 308 aa21.24■□□□□ 0.99
TRAPPC4-203ENST00000447216 CLEC10AQ8IUN9 316 aa21.24■□□□□ 0.99
TRAPPC4-203ENST00000447216 CCDC17Q96LX7 622 aa21.24■□□□□ 0.99
TRAPPC4-203ENST00000447216 KIF2CQ99661 725 aa21.24■□□□□ 0.99
TRAPPC4-203ENST00000447216 ZKSCAN3Q9BRR0 538 aa21.24■□□□□ 0.99
TRAPPC4-203ENST00000447216 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.24■□□□□ 0.99
TRAPPC4-203ENST00000447216 NMT2O60551 498 aa21.23■□□□□ 0.99
TRAPPC4-203ENST00000447216 CTNND1O60716 968 aaKnown RBP21.23■□□□□ 0.99
TRAPPC4-203ENST00000447216 GUCY1A2P33402 732 aa21.23■□□□□ 0.99
TRAPPC4-203ENST00000447216 SEPT2Q15019 361 aa21.23■□□□□ 0.99
TRAPPC4-203ENST00000447216 MAP3K11Q16584 847 aa21.23■□□□□ 0.99
TRAPPC4-203ENST00000447216 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.23■□□□□ 0.99
TRAPPC4-203ENST00000447216 CCDC84Q86UT8 332 aaPredicted RBP21.23■□□□□ 0.99
TRAPPC4-203ENST00000447216 C2orf69Q8N8R5 385 aa21.23■□□□□ 0.99
TRAPPC4-203ENST00000447216 NEDD1Q8NHV4 660 aa21.23■□□□□ 0.99
TRAPPC4-203ENST00000447216 CLMNQ96JQ2 1002 aa21.23■□□□□ 0.99
TRAPPC4-203ENST00000447216 TCEANC2Q96MN5 208 aa21.23■□□□□ 0.99
TRAPPC4-203ENST00000447216 LRRC2Q9BYS8 371 aa21.23■□□□□ 0.99
TRAPPC4-203ENST00000447216 UPF3BQ9BZI7 483 aaKnown RBP21.23■□□□□ 0.99
TRAPPC4-203ENST00000447216 ZBTB21Q9ULJ3 1066 aa21.23■□□□□ 0.99
TRAPPC4-203ENST00000447216 PSMA5P28066 241 aa21.22■□□□□ 0.99
TRAPPC4-203ENST00000447216 VGLL4Q14135 290 aa21.22■□□□□ 0.99
TRAPPC4-203ENST00000447216 BLOC1S2Q6QNY1 142 aa21.22■□□□□ 0.99
TRAPPC4-203ENST00000447216 IL17RAQ96F46 866 aa21.22■□□□□ 0.99
TRAPPC4-203ENST00000447216 TM6SF1Q9BZW5 370 aa21.22■□□□□ 0.99
TRAPPC4-203ENST00000447216 CABP5Q9NP86 173 aa21.22■□□□□ 0.99
TRAPPC4-203ENST00000447216 PLIN4Q96Q06 1357 aa21.22■□□□□ 0.99
TRAPPC4-203ENST00000447216 PRC1O43663 620 aa21.21■□□□□ 0.99
TRAPPC4-203ENST00000447216 RAB3GAP1Q15042 981 aa21.21■□□□□ 0.99
TRAPPC4-203ENST00000447216 TMEM179Q6ZVK1 233 aa21.21■□□□□ 0.99
TRAPPC4-203ENST00000447216 SCYL3Q8IZE3 742 aa21.21■□□□□ 0.99
TRAPPC4-203ENST00000447216 ZSWIM6Q9HCJ5 1215 aa21.21■□□□□ 0.99
TRAPPC4-203ENST00000447216 SNCAIPQ9Y6H5 919 aa21.21■□□□□ 0.99
TRAPPC4-203ENST00000447216 IGKV6D-41A0A0C4DH26 115 aa21.2■□□□□ 0.98
TRAPPC4-203ENST00000447216 RPS6KB1P23443 525 aa21.2■□□□□ 0.98
TRAPPC4-203ENST00000447216 MCM5P33992 734 aa21.2■□□□□ 0.98
TRAPPC4-203ENST00000447216 FKBP1BP68106 108 aa21.2■□□□□ 0.98
TRAPPC4-203ENST00000447216 NOL9Q5SY16 702 aaKnown RBP21.2■□□□□ 0.98
TRAPPC4-203ENST00000447216 LDLRAD1Q5T700 205 aa21.2■□□□□ 0.98
TRAPPC4-203ENST00000447216 DHX32Q7L7V1 743 aaKnown RBP21.2■□□□□ 0.98
TRAPPC4-203ENST00000447216 ANKRD13AQ8IZ07 590 aa21.2■□□□□ 0.98
TRAPPC4-203ENST00000447216 ELP3Q9H9T3 547 aa21.2■□□□□ 0.98
TRAPPC4-203ENST00000447216 GPHNQ9NQX3 736 aaPredicted RBP21.2■□□□□ 0.98
TRAPPC4-203ENST00000447216 IL17RBQ9NRM6 502 aa21.2■□□□□ 0.98
TRAPPC4-203ENST00000447216 CSADQ9Y600 493 aa21.2■□□□□ 0.98
TRAPPC4-203ENST00000447216 PTPRFP10586 1907 aa21.19■□□□□ 0.98
TRAPPC4-203ENST00000447216 ASNSP08243 561 aa21.19■□□□□ 0.98
TRAPPC4-203ENST00000447216 EXOSC10Q01780 885 aaKnown RBP21.19■□□□□ 0.98
TRAPPC4-203ENST00000447216 RUFY3Q7L099 469 aa21.19■□□□□ 0.98
TRAPPC4-203ENST00000447216 CEP95Q96GE4 821 aa21.19■□□□□ 0.98
TRAPPC4-203ENST00000447216 PICK1Q9NRD5 415 aa21.19■□□□□ 0.98
TRAPPC4-203ENST00000447216 CYP46A1Q9Y6A2 500 aa21.19■□□□□ 0.98
TRAPPC4-203ENST00000447216 IFIT3O14879 490 aaKnown RBP21.18■□□□□ 0.98
TRAPPC4-203ENST00000447216 HMGB1P09429 215 aaKnown RBP21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms