RNA–Protein interactions for RNA: ENST00000447098.6

PTCH2-203, Transcript of patched 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTCH2, Length 4,298 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2-203ENST00000447098 HSP90B2PQ58FF3 399 aa12.83□□□□□ -0.36
PTCH2-203ENST00000447098 ZBTB9Q96C00 473 aa12.83□□□□□ -0.36
PTCH2-203ENST00000447098 PPP1R13BQ96KQ4 1090 aa12.83□□□□□ -0.36
PTCH2-203ENST00000447098 SRRTQ9BXP5 876 aaKnown RBP12.83□□□□□ -0.36
PTCH2-203ENST00000447098 BSDC1Q9NW68 430 aaPredicted RBP12.83□□□□□ -0.36
PTCH2-203ENST00000447098 EVCP57679 992 aa12.83□□□□□ -0.36
PTCH2-203ENST00000447098 CHMP4BP1P59074 171 aa12.83□□□□□ -0.36
PTCH2-203ENST00000447098 GRAPQ13588 217 aa12.83□□□□□ -0.36
PTCH2-203ENST00000447098 DEFB132Q7Z7B7 95 aa12.83□□□□□ -0.36
PTCH2-203ENST00000447098 GRAPLQ8TC17 118 aaPredicted RBP12.83□□□□□ -0.36
PTCH2-203ENST00000447098 ZSWIM4Q9H7M6 989 aa12.83□□□□□ -0.36
PTCH2-203ENST00000447098 CAMTA1Q9Y6Y1 1673 aa12.83□□□□□ -0.36
PTCH2-203ENST00000447098 C21orf2O43822 256 aa12.82□□□□□ -0.36
PTCH2-203ENST00000447098 UBASH3AP57075 661 aa12.82□□□□□ -0.36
PTCH2-203ENST00000447098 C10orf67Q8IYJ2 551 aa12.82□□□□□ -0.36
PTCH2-203ENST00000447098 ZNF34Q8IZ26 560 aa12.82□□□□□ -0.36
PTCH2-203ENST00000447098 USP28Q96RU2 1077 aa12.82□□□□□ -0.36
PTCH2-203ENST00000447098 CEP131Q9UPN4 1083 aa12.82□□□□□ -0.36
PTCH2-203ENST00000447098 PNMA6AP0CW24 399 aaPredicted RBP12.82□□□□□ -0.36
PTCH2-203ENST00000447098 UBE3CQ15386 1083 aa12.82□□□□□ -0.36
PTCH2-203ENST00000447098 FAM193AP78312 1265 aa12.82□□□□□ -0.36
PTCH2-203ENST00000447098 GRM1Q13255 1194 aa12.82□□□□□ -0.36
PTCH2-203ENST00000447098 IQCB1Q15051 598 aa12.82□□□□□ -0.36
PTCH2-203ENST00000447098 CLEC11AQ9Y240 323 aa12.82□□□□□ -0.36
PTCH2-203ENST00000447098 RIPOR2Q9Y4F9 1068 aa12.82□□□□□ -0.36
PTCH2-203ENST00000447098 RESTQ13127 1097 aa12.82□□□□□ -0.36
PTCH2-203ENST00000447098 TMEM87BQ96K49 555 aa12.82□□□□□ -0.36
PTCH2-203ENST00000447098 CLRN2A0PK11 232 aa12.81□□□□□ -0.36
PTCH2-203ENST00000447098 CACNB3P54284 484 aa12.81□□□□□ -0.36
PTCH2-203ENST00000447098 IL17RAQ96F46 866 aa12.81□□□□□ -0.36
PTCH2-203ENST00000447098 OAS2P29728 719 aaKnown RBP12.81□□□□□ -0.36
PTCH2-203ENST00000447098 CHRNA5P30532 468 aa12.81□□□□□ -0.36
PTCH2-203ENST00000447098 AFMP43652 599 aa12.81□□□□□ -0.36
PTCH2-203ENST00000447098 ETF1P62495 437 aaKnown RBP12.81□□□□□ -0.36
PTCH2-203ENST00000447098 CCZ1BP86790 482 aa12.81□□□□□ -0.36
PTCH2-203ENST00000447098 CCZ1P86791 482 aaPredicted RBP12.81□□□□□ -0.36
PTCH2-203ENST00000447098 NYAP1Q6ZVC0 841 aa12.81□□□□□ -0.36
PTCH2-203ENST00000447098 CDHR2Q9BYE9 1310 aa12.81□□□□□ -0.36
PTCH2-203ENST00000447098 BBOX1O75936 387 aa12.81□□□□□ -0.36
PTCH2-203ENST00000447098 SEC31AO94979 1220 aaKnown RBP12.81□□□□□ -0.36
PTCH2-203ENST00000447098 GOLGA8HP0CJ92 632 aa12.81□□□□□ -0.36
PTCH2-203ENST00000447098 TNNI2P48788 182 aa12.81□□□□□ -0.36
PTCH2-203ENST00000447098 ST3GAL1Q11201 340 aa12.81□□□□□ -0.36
PTCH2-203ENST00000447098 TEKT1Q969V4 418 aa12.81□□□□□ -0.36
PTCH2-203ENST00000447098 PLIN2Q99541 437 aa12.81□□□□□ -0.36
PTCH2-203ENST00000447098 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.81□□□□□ -0.36
PTCH2-203ENST00000447098 TNKSO95271 1327 aa12.81□□□□□ -0.36
PTCH2-203ENST00000447098 PSDA5PKW4 1024 aaPredicted RBP12.8□□□□□ -0.36
PTCH2-203ENST00000447098 USP17L8P0C7I0 530 aa12.8□□□□□ -0.36
PTCH2-203ENST00000447098 TOB2Q14106 344 aaPredicted RBP12.8□□□□□ -0.36
PTCH2-203ENST00000447098 SPECC1Q5M775 1068 aa12.8□□□□□ -0.36
PTCH2-203ENST00000447098 NIM1KQ8IY84 436 aa12.8□□□□□ -0.36
PTCH2-203ENST00000447098 TBC1D22AQ8WUA7 517 aa12.8□□□□□ -0.36
PTCH2-203ENST00000447098 TCP10L2B9ZVM9 353 aa12.8□□□□□ -0.36
PTCH2-203ENST00000447098 IDEP14735 1019 aa12.8□□□□□ -0.36
PTCH2-203ENST00000447098 MECOMQ03112 1051 aa12.8□□□□□ -0.36
PTCH2-203ENST00000447098 SKIDA1Q1XH10 827 aa12.8□□□□□ -0.36
PTCH2-203ENST00000447098 CNKSR1Q969H4 720 aa12.8□□□□□ -0.36
PTCH2-203ENST00000447098 RASSF4Q9H2L5 321 aa12.8□□□□□ -0.36
PTCH2-203ENST00000447098 LEMD3Q9Y2U8 911 aa12.8□□□□□ -0.36
PTCH2-203ENST00000447098 UBA7P41226 1012 aa12.8□□□□□ -0.36
PTCH2-203ENST00000447098 RFX5P48382 616 aaPredicted RBP12.8□□□□□ -0.36
PTCH2-203ENST00000447098 VPS54Q9P1Q0 977 aa12.8□□□□□ -0.36
PTCH2-203ENST00000447098 SPTLC2O15270 562 aa12.79□□□□□ -0.36
PTCH2-203ENST00000447098 MCM7P33993 719 aa12.79□□□□□ -0.36
PTCH2-203ENST00000447098 PAXIP1Q6ZW49 1069 aaPredicted RBP12.79□□□□□ -0.36
PTCH2-203ENST00000447098 ZNF654Q8IZM8 581 aa12.79□□□□□ -0.36
PTCH2-203ENST00000447098 DYNLL2Q96FJ2 89 aa12.79□□□□□ -0.36
PTCH2-203ENST00000447098 NTSR2O95665 410 aa12.79□□□□□ -0.36
PTCH2-203ENST00000447098 DLGAP5Q15398 846 aa12.79□□□□□ -0.36
PTCH2-203ENST00000447098 PRR5LQ6MZQ0 368 aa12.79□□□□□ -0.36
PTCH2-203ENST00000447098 RTL9Q8NET4 1388 aa12.79□□□□□ -0.36
PTCH2-203ENST00000447098 SYKP43405 635 aa12.79□□□□□ -0.36
PTCH2-203ENST00000447098 FANCCQ00597 558 aa12.79□□□□□ -0.36
PTCH2-203ENST00000447098 MCM6Q14566 821 aa12.79□□□□□ -0.36
PTCH2-203ENST00000447098 DIS3L2Q8IYB7 885 aaKnown RBP12.79□□□□□ -0.36
PTCH2-203ENST00000447098 IPO4Q8TEX9 1081 aaKnown RBP12.79□□□□□ -0.36
PTCH2-203ENST00000447098 CCDC102AQ96A19 550 aa12.79□□□□□ -0.36
PTCH2-203ENST00000447098 ANKRD26Q9UPS8 1709 aa12.78□□□□□ -0.36
PTCH2-203ENST00000447098 EIF3JO75822 258 aaKnown RBP12.78□□□□□ -0.36
PTCH2-203ENST00000447098 SCRN1Q12765 414 aa12.78□□□□□ -0.36
PTCH2-203ENST00000447098 SMC1AQ14683 1233 aaKnown RBP12.78□□□□□ -0.36
PTCH2-203ENST00000447098 ZNF174Q15697 407 aa12.78□□□□□ -0.36
PTCH2-203ENST00000447098 ZSCAN26Q16670 478 aa12.78□□□□□ -0.36
PTCH2-203ENST00000447098 LRRC47Q8N1G4 583 aaKnown RBP12.78□□□□□ -0.36
PTCH2-203ENST00000447098 KCNG4Q8TDN1 519 aa12.78□□□□□ -0.36
PTCH2-203ENST00000447098 CCDC12Q8WUD4 166 aaPredicted RBP12.78□□□□□ -0.36
PTCH2-203ENST00000447098 ERLIN1O75477 346 aa12.78□□□□□ -0.36
PTCH2-203ENST00000447098 CYP2C19P33261 490 aa12.78□□□□□ -0.36
PTCH2-203ENST00000447098 GNAQP50148 359 aa12.78□□□□□ -0.36
PTCH2-203ENST00000447098 DPCR1Q3MIW9 517 aa12.78□□□□□ -0.36
PTCH2-203ENST00000447098 RBM43Q6ZSC3 357 aaKnown RBP12.78□□□□□ -0.36
PTCH2-203ENST00000447098 DHX40Q8IX18 779 aaKnown RBP12.78□□□□□ -0.36
PTCH2-203ENST00000447098 UBA5Q9GZZ9 404 aa12.78□□□□□ -0.36
PTCH2-203ENST00000447098 GOLPH3LQ9H4A5 285 aa12.78□□□□□ -0.36
PTCH2-203ENST00000447098 KIAA1468Q9P260 1216 aa12.78□□□□□ -0.36
PTCH2-203ENST00000447098 RCOR1Q9UKL0 485 aa12.78□□□□□ -0.36
PTCH2-203ENST00000447098 TRIM75PA6NK02 468 aa12.78□□□□□ -0.36
PTCH2-203ENST00000447098 PARP1P09874 1014 aaKnown RBP12.78□□□□□ -0.36
PTCH2-203ENST00000447098 CYP2D6P10635 497 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms