RNA–Protein interactions for RNA: ENST00000447041.6

COL9A1-205, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 4

Gene COL9A1, Length 690 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-205ENST00000447041 PABPC4Q13310 644 aaKnown RBP eCLIP22.15■■□□□ 1.14
COL9A1-205ENST00000447041 CLASRPQ8N2M8 674 aaKnown RBP22.15■■□□□ 1.14
COL9A1-205ENST00000447041 SLAIN1Q8ND83 568 aa22.15■■□□□ 1.14
COL9A1-205ENST00000447041 ASCC2Q9H1I8 757 aaPredicted RBP22.15■■□□□ 1.14
COL9A1-205ENST00000447041 BIN2Q9UBW5 565 aaPredicted RBP22.15■■□□□ 1.14
COL9A1-205ENST00000447041 CCL5P13501 91 aa22.14■■□□□ 1.13
COL9A1-205ENST00000447041 BACE1P56817 501 aa22.14■■□□□ 1.13
COL9A1-205ENST00000447041 CERS3Q8IU89 383 aa22.14■■□□□ 1.13
COL9A1-205ENST00000447041 RIOK1Q9BRS2 568 aaKnown RBP22.14■■□□□ 1.13
COL9A1-205ENST00000447041 ADCY3O60266 1144 aa22.13■■□□□ 1.13
COL9A1-205ENST00000447041 ELNP15502 786 aa22.13■■□□□ 1.13
COL9A1-205ENST00000447041 UBXN2AP68543 259 aa22.13■■□□□ 1.13
COL9A1-205ENST00000447041 DNAJC2Q99543 621 aaKnown RBP22.13■■□□□ 1.13
COL9A1-205ENST00000447041 IFIT2P09913 472 aaKnown RBP22.12■■□□□ 1.13
COL9A1-205ENST00000447041 GCLCP48506 637 aaPredicted RBP22.12■■□□□ 1.13
COL9A1-205ENST00000447041 TTF1Q15361 905 aaPredicted RBP22.12■■□□□ 1.13
COL9A1-205ENST00000447041 C20orf194Q5TEA3 1177 aa22.12■■□□□ 1.13
COL9A1-205ENST00000447041 RNF208Q9H0X6 261 aa22.12■■□□□ 1.13
COL9A1-205ENST00000447041 GINM1Q9NU53 330 aa22.12■■□□□ 1.13
COL9A1-205ENST00000447041 TMOD4Q9NZQ9 345 aa22.12■■□□□ 1.13
COL9A1-205ENST00000447041 DOCK3Q8IZD9 2030 aa22.11■■□□□ 1.13
COL9A1-205ENST00000447041 USP17L10C9JJH3 530 aa22.11■■□□□ 1.13
COL9A1-205ENST00000447041 GOLIM4O00461 696 aa22.11■■□□□ 1.13
COL9A1-205ENST00000447041 GH2P01242 217 aa22.11■■□□□ 1.13
COL9A1-205ENST00000447041 PDE6AP16499 860 aa22.11■■□□□ 1.13
COL9A1-205ENST00000447041 TMED8Q6PL24 325 aaPredicted RBP22.11■■□□□ 1.13
COL9A1-205ENST00000447041 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.11■■□□□ 1.13
COL9A1-205ENST00000447041 COA7Q96BR5 231 aa22.11■■□□□ 1.13
COL9A1-205ENST00000447041 EDC3Q96F86 508 aaKnown RBP22.11■■□□□ 1.13
COL9A1-205ENST00000447041 UNC93B1Q9H1C4 597 aa22.11■■□□□ 1.13
COL9A1-205ENST00000447041 EHD4Q9H223 541 aa22.11■■□□□ 1.13
COL9A1-205ENST00000447041 SERPINB13Q9UIV8 391 aa22.11■■□□□ 1.13
COL9A1-205ENST00000447041 TAOK2Q9UL54 1235 aa22.11■■□□□ 1.13
COL9A1-205ENST00000447041 MAGEB6P1A0A0J9YX57 407 aa22.1■■□□□ 1.13
COL9A1-205ENST00000447041 PEX10O60683 326 aa22.1■■□□□ 1.13
COL9A1-205ENST00000447041 INHAP05111 366 aa22.1■■□□□ 1.13
COL9A1-205ENST00000447041 GJB1P08034 283 aa22.1■■□□□ 1.13
COL9A1-205ENST00000447041 GJA8P48165 433 aa22.1■■□□□ 1.13
COL9A1-205ENST00000447041 IRX3P78415 501 aaPredicted RBP22.1■■□□□ 1.13
COL9A1-205ENST00000447041 IRF5Q13568 498 aa22.1■■□□□ 1.13
COL9A1-205ENST00000447041 SLC9C2Q5TAH2 1124 aa22.1■■□□□ 1.13
COL9A1-205ENST00000447041 TATDN1Q6P1N9 297 aa22.1■■□□□ 1.13
COL9A1-205ENST00000447041 PXYLP1Q8TE99 480 aa22.1■■□□□ 1.13
COL9A1-205ENST00000447041 PLXNB2O15031 1838 aa22.1■■□□□ 1.13
COL9A1-205ENST00000447041 ZNF532Q9HCE3 1301 aa22.09■■□□□ 1.13
COL9A1-205ENST00000447041 C19orf81C9J6K1 198 aa22.09■■□□□ 1.13
COL9A1-205ENST00000447041 RAB11FIP3O75154 756 aa22.09■■□□□ 1.13
COL9A1-205ENST00000447041 TCRBV5S4A2TA0A5A2 114 aa22.08■■□□□ 1.13
COL9A1-205ENST00000447041 HOXA7P31268 230 aaPredicted RBP22.08■■□□□ 1.13
COL9A1-205ENST00000447041 PLCD1P51178 756 aa22.08■■□□□ 1.13
COL9A1-205ENST00000447041 EVX2Q03828 476 aa22.08■■□□□ 1.13
COL9A1-205ENST00000447041 TTC6Q86TZ1 520 aa22.08■■□□□ 1.13
COL9A1-205ENST00000447041 NKX2-3Q8TAU0 364 aa22.08■■□□□ 1.13
COL9A1-205ENST00000447041 P2RX7Q99572 595 aaKnown RBP22.08■■□□□ 1.13
COL9A1-205ENST00000447041 CHMP4BQ9H444 224 aaKnown RBP22.08■■□□□ 1.13
COL9A1-205ENST00000447041 EMILIN3Q9NT22 766 aa22.08■■□□□ 1.13
COL9A1-205ENST00000447041 MORF4L1Q9UBU8 362 aa22.08■■□□□ 1.13
COL9A1-205ENST00000447041 HERVK_113P62684 666 aa22.07■■□□□ 1.12
COL9A1-205ENST00000447041 ZYXQ15942 572 aaKnown RBP22.07■■□□□ 1.12
COL9A1-205ENST00000447041 U2AF1L4Q8WU68 220 aaKnown RBP22.07■■□□□ 1.12
COL9A1-205ENST00000447041 GCC1Q96CN9 775 aa22.07■■□□□ 1.12
COL9A1-205ENST00000447041 BOLA2Q9H3K6 86 aa22.07■■□□□ 1.12
COL9A1-205ENST00000447041 TXNRD2Q9NNW7 524 aa22.07■■□□□ 1.12
COL9A1-205ENST00000447041 SHMT1P34896 483 aa22.06■■□□□ 1.12
COL9A1-205ENST00000447041 RAB3GAP1Q15042 981 aa22.06■■□□□ 1.12
COL9A1-205ENST00000447041 SLFNL1Q499Z3 407 aa22.06■■□□□ 1.12
COL9A1-205ENST00000447041 CERKLQ49MI3 558 aaPredicted RBP22.06■■□□□ 1.12
COL9A1-205ENST00000447041 USP17L2Q6R6M4 530 aa22.06■■□□□ 1.12
COL9A1-205ENST00000447041 LCORLQ8N3X6 602 aa22.06■■□□□ 1.12
COL9A1-205ENST00000447041 SDR42E1Q8WUS8 393 aa22.06■■□□□ 1.12
COL9A1-205ENST00000447041 CRNKL1Q9BZJ0 848 aaKnown RBP22.06■■□□□ 1.12
COL9A1-205ENST00000447041 PAG1Q9NWQ8 432 aa22.06■■□□□ 1.12
COL9A1-205ENST00000447041 POLR3DP05423 398 aaPredicted RBP22.05■■□□□ 1.12
COL9A1-205ENST00000447041 PDE3AQ14432 1141 aa22.05■■□□□ 1.12
COL9A1-205ENST00000447041 ABCB5Q2M3G0 1257 aa22.05■■□□□ 1.12
COL9A1-205ENST00000447041 UBE2Q1Q7Z7E8 422 aa22.05■■□□□ 1.12
COL9A1-205ENST00000447041 FEZ1Q99689 392 aa22.05■■□□□ 1.12
COL9A1-205ENST00000447041 MYH7P12883 1935 aa22.04■■□□□ 1.12
COL9A1-205ENST00000447041 GABPAQ06546 454 aa22.04■■□□□ 1.12
COL9A1-205ENST00000447041 MCM9Q9NXL9 1143 aa22.04■■□□□ 1.12
COL9A1-205ENST00000447041 GJD2Q9UKL4 321 aa22.04■■□□□ 1.12
COL9A1-205ENST00000447041 SMARCA5O60264 1052 aaPredicted RBP22.03■■□□□ 1.12
COL9A1-205ENST00000447041 SGPL1O95470 568 aa22.03■■□□□ 1.12
COL9A1-205ENST00000447041 CHGBP05060 677 aa22.03■■□□□ 1.12
COL9A1-205ENST00000447041 ATP5JP18859 108 aa22.03■■□□□ 1.12
COL9A1-205ENST00000447041 HABP4Q5JVS0 413 aaKnown RBP22.03■■□□□ 1.12
COL9A1-205ENST00000447041 POTEEQ6S8J3 1075 aa22.03■■□□□ 1.12
COL9A1-205ENST00000447041 ACER1Q8TDN7 264 aa22.03■■□□□ 1.12
COL9A1-205ENST00000447041 C12orf42Q96LP6 360 aa22.03■■□□□ 1.12
COL9A1-205ENST00000447041 ARMT1Q9H993 441 aa22.03■■□□□ 1.12
COL9A1-205ENST00000447041 DCP1AQ9NPI6 582 aaPredicted RBP22.03■■□□□ 1.12
COL9A1-205ENST00000447041 PAK6Q9NQU5 681 aaPredicted RBP22.03■■□□□ 1.12
COL9A1-205ENST00000447041 RBPJLQ9UBG7 517 aa22.03■■□□□ 1.12
COL9A1-205ENST00000447041 FARP2O94887 1054 aaPredicted RBP22.02■■□□□ 1.12
COL9A1-205ENST00000447041 CYP2D6P10635 497 aa22.02■■□□□ 1.12
COL9A1-205ENST00000447041 GUCY1A2P33402 732 aa22.02■■□□□ 1.12
COL9A1-205ENST00000447041 ADD2P35612 726 aa22.02■■□□□ 1.12
COL9A1-205ENST00000447041 GPRC5AQ8NFJ5 357 aa22.02■■□□□ 1.12
COL9A1-205ENST00000447041 DEFB118Q96PH6 123 aa22.02■■□□□ 1.12
COL9A1-205ENST00000447041 HAUS7Q99871 368 aa22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms