RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 AKAP12Q02952 1782 aa10.8□□□□□ -0.68
SMARCE1-206ENST00000447024 PLCH1Q4KWH8 1693 aa10.79□□□□□ -0.68
SMARCE1-206ENST00000447024 KTN1Q86UP2 1357 aaKnown RBP10.79□□□□□ -0.68
SMARCE1-206ENST00000447024 CABP4P57796 275 aa10.79□□□□□ -0.68
SMARCE1-206ENST00000447024 BEND4Q6ZU67 534 aa10.79□□□□□ -0.68
SMARCE1-206ENST00000447024 KCNH5Q8NCM2 988 aa10.79□□□□□ -0.68
SMARCE1-206ENST00000447024 SHKBP1Q8TBC3 707 aa10.79□□□□□ -0.68
SMARCE1-206ENST00000447024 RNF208Q9H0X6 261 aa10.79□□□□□ -0.68
SMARCE1-206ENST00000447024 KCNF1Q9H3M0 494 aa10.79□□□□□ -0.68
SMARCE1-206ENST00000447024 OSGEPQ9NPF4 335 aa10.79□□□□□ -0.68
SMARCE1-206ENST00000447024 PHRF1Q9P1Y6 1649 aaKnown RBP10.79□□□□□ -0.68
SMARCE1-206ENST00000447024 KIAA0232Q92628 1395 aa10.78□□□□□ -0.68
SMARCE1-206ENST00000447024 EDC4Q6P2E9 1401 aaKnown RBP10.78□□□□□ -0.68
SMARCE1-206ENST00000447024 NLRP12P59046 1061 aa10.78□□□□□ -0.68
SMARCE1-206ENST00000447024 BTG4Q9NY30 223 aa10.78□□□□□ -0.68
SMARCE1-206ENST00000447024 USP31Q70CQ4 1352 aa10.77□□□□□ -0.68
SMARCE1-206ENST00000447024 NFKBIEO00221 500 aa10.77□□□□□ -0.69
SMARCE1-206ENST00000447024 SEPT3Q9UH03 358 aa10.77□□□□□ -0.69
SMARCE1-206ENST00000447024 MON2Q7Z3U7 1717 aa10.77□□□□□ -0.69
SMARCE1-206ENST00000447024 SLIT3O75094 1523 aa10.77□□□□□ -0.69
SMARCE1-206ENST00000447024 NRKQ7Z2Y5 1582 aa10.77□□□□□ -0.69
SMARCE1-206ENST00000447024 AATKQ6ZMQ8 1374 aa10.77□□□□□ -0.69
SMARCE1-206ENST00000447024 ZC3H6P61129 1189 aaKnown RBP10.76□□□□□ -0.69
SMARCE1-206ENST00000447024 NUTM2GQ5VZR2 741 aa10.76□□□□□ -0.69
SMARCE1-206ENST00000447024 C1orf127Q8N9H9 656 aa10.76□□□□□ -0.69
SMARCE1-206ENST00000447024 TMC1Q8TDI8 760 aa10.76□□□□□ -0.69
SMARCE1-206ENST00000447024 SLC7A3Q8WY07 619 aa10.76□□□□□ -0.69
SMARCE1-206ENST00000447024 RUSC1Q9BVN2 902 aa10.76□□□□□ -0.69
SMARCE1-206ENST00000447024 SLC12A5Q9H2X9 1139 aa10.76□□□□□ -0.69
SMARCE1-206ENST00000447024 DZANK1Q9NVP4 752 aa10.76□□□□□ -0.69
SMARCE1-206ENST00000447024 HIF3AQ9Y2N7 669 aa10.76□□□□□ -0.69
SMARCE1-206ENST00000447024 CCDC9Q9Y3X0 531 aaKnown RBP10.76□□□□□ -0.69
SMARCE1-206ENST00000447024 GLI3P10071 1580 aa10.76□□□□□ -0.69
SMARCE1-206ENST00000447024 SPATA31A5Q5VU36 1347 aa10.76□□□□□ -0.69
SMARCE1-206ENST00000447024 SPATA31A7Q8IWB4 1347 aa10.76□□□□□ -0.69
SMARCE1-206ENST00000447024 NRAPQ86VF7 1730 aa10.75□□□□□ -0.69
SMARCE1-206ENST00000447024 CD163L1Q9NR16 1453 aa10.75□□□□□ -0.69
SMARCE1-206ENST00000447024 ABCC6O95255 1503 aa10.75□□□□□ -0.69
SMARCE1-206ENST00000447024 FDX2Q6P4F2 183 aa10.75□□□□□ -0.69
SMARCE1-206ENST00000447024 HHIPQ96QV1 700 aa10.75□□□□□ -0.69
SMARCE1-206ENST00000447024 THRAP3Q9Y2W1 955 aaKnown RBP10.75□□□□□ -0.69
SMARCE1-206ENST00000447024 PIK3C2AO00443 1686 aa10.75□□□□□ -0.69
SMARCE1-206ENST00000447024 USP54Q70EL1 1684 aa10.75□□□□□ -0.69
SMARCE1-206ENST00000447024 PDE2AO00408 941 aaPredicted RBP10.74□□□□□ -0.69
SMARCE1-206ENST00000447024 TRPA1O75762 1119 aa10.74□□□□□ -0.69
SMARCE1-206ENST00000447024 RPLP1P05386 114 aaKnown RBP10.74□□□□□ -0.69
SMARCE1-206ENST00000447024 CES1P23141 567 aa10.74□□□□□ -0.69
SMARCE1-206ENST00000447024 ATP2B4P23634 1241 aa10.74□□□□□ -0.69
SMARCE1-206ENST00000447024 EVA1CP58658 441 aa10.74□□□□□ -0.69
SMARCE1-206ENST00000447024 XKR5Q6UX68 686 aa10.74□□□□□ -0.69
SMARCE1-206ENST00000447024 EDEM1Q92611 657 aa10.74□□□□□ -0.69
SMARCE1-206ENST00000447024 SOX13Q9UN79 622 aa10.74□□□□□ -0.69
SMARCE1-206ENST00000447024 ANKRD36BQ8N2N9 1353 aa10.74□□□□□ -0.69
SMARCE1-206ENST00000447024 LMO7Q8WWI1 1683 aa10.73□□□□□ -0.69
SMARCE1-206ENST00000447024 WNT11O96014 354 aa10.73□□□□□ -0.69
SMARCE1-206ENST00000447024 CHRNA2Q15822 529 aa10.73□□□□□ -0.69
SMARCE1-206ENST00000447024 HGSNATQ68CP4 663 aa10.73□□□□□ -0.69
SMARCE1-206ENST00000447024 ARHGEF25Q86VW2 580 aa10.73□□□□□ -0.69
SMARCE1-206ENST00000447024 RNF114Q9Y508 228 aa10.73□□□□□ -0.69
SMARCE1-206ENST00000447024 SPATA31A1Q5TZJ5 1347 aa10.73□□□□□ -0.69
SMARCE1-206ENST00000447024 A0A1W2PP64 1363 aa10.73□□□□□ -0.69
SMARCE1-206ENST00000447024 A6NHS1 94 aa10.72□□□□□ -0.69
SMARCE1-206ENST00000447024 WDR64B1ANS9 1081 aa10.72□□□□□ -0.69
SMARCE1-206ENST00000447024 GAS2O43903 313 aaKnown RBP10.72□□□□□ -0.69
SMARCE1-206ENST00000447024 MFSD14AQ96MC6 490 aa10.72□□□□□ -0.69
SMARCE1-206ENST00000447024 GGNBP2Q9H3C7 697 aa10.72□□□□□ -0.69
SMARCE1-206ENST00000447024 CAMTA1Q9Y6Y1 1673 aa10.72□□□□□ -0.69
SMARCE1-206ENST00000447024 KRTAP4-8A0A0G2JLE6 195 aa10.71□□□□□ -0.69
SMARCE1-206ENST00000447024 HOXA10P31260 410 aaPredicted RBP10.71□□□□□ -0.69
SMARCE1-206ENST00000447024 DNM1Q05193 864 aaKnown RBP10.71□□□□□ -0.69
SMARCE1-206ENST00000447024 C19orf57Q0VDD7 668 aa10.71□□□□□ -0.69
SMARCE1-206ENST00000447024 KRT27Q7Z3Y8 459 aa10.71□□□□□ -0.69
SMARCE1-206ENST00000447024 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.71□□□□□ -0.69
SMARCE1-206ENST00000447024 CHRDQ9H2X0 955 aa10.71□□□□□ -0.69
SMARCE1-206ENST00000447024 NFAT5O94916 1531 aa10.7□□□□□ -0.7
SMARCE1-206ENST00000447024 COL5A2P05997 1499 aaPredicted RBP10.7□□□□□ -0.7
SMARCE1-206ENST00000447024 MEGF11A6BM72 1044 aa10.7□□□□□ -0.7
SMARCE1-206ENST00000447024 PDGFAP04085 211 aa10.7□□□□□ -0.7
SMARCE1-206ENST00000447024 YBX3P16989 372 aaKnown RBP eCLIP10.7□□□□□ -0.7
SMARCE1-206ENST00000447024 ARL4DP49703 201 aa10.7□□□□□ -0.7
SMARCE1-206ENST00000447024 SGO2Q562F6 1265 aa10.7□□□□□ -0.7
SMARCE1-206ENST00000447024 TCP11L2Q8N4U5 519 aa10.7□□□□□ -0.7
SMARCE1-206ENST00000447024 TMEM102Q8N9M5 508 aaPredicted RBP10.7□□□□□ -0.7
SMARCE1-206ENST00000447024 HELQQ8TDG4 1101 aa10.7□□□□□ -0.7
SMARCE1-206ENST00000447024 OVOS2A0A0J9YW53 1432 aa10.69□□□□□ -0.7
SMARCE1-206ENST00000447024 CRB1P82279 1406 aa10.69□□□□□ -0.7
SMARCE1-206ENST00000447024 OVOS2Q6IE36 1432 aa10.69□□□□□ -0.7
SMARCE1-206ENST00000447024 PCSK2P16519 638 aa10.69□□□□□ -0.7
SMARCE1-206ENST00000447024 MAP4P27816 1152 aaKnown RBP10.69□□□□□ -0.7
SMARCE1-206ENST00000447024 C8orf34Q49A92 452 aa10.69□□□□□ -0.7
SMARCE1-206ENST00000447024 COG3Q96JB2 828 aa10.69□□□□□ -0.7
SMARCE1-206ENST00000447024 COL18A1P39060 1754 aa10.69□□□□□ -0.7
SMARCE1-206ENST00000447024 THSD7AQ9UPZ6 1657 aa10.69□□□□□ -0.7
SMARCE1-206ENST00000447024 EP400Q96L91 3159 aa10.69□□□□□ -0.7
SMARCE1-206ENST00000447024 WDR17Q8IZU2 1322 aa10.68□□□□□ -0.7
SMARCE1-206ENST00000447024 NME9Q86XW9 330 aa10.68□□□□□ -0.7
SMARCE1-206ENST00000447024 PBXIP1Q96AQ6 731 aa10.68□□□□□ -0.7
SMARCE1-206ENST00000447024 PIM2Q9P1W9 311 aa10.68□□□□□ -0.7
SMARCE1-206ENST00000447024 ADGRE2Q9UHX3 823 aa10.68□□□□□ -0.7
SMARCE1-206ENST00000447024 BRWD3Q6RI45 1802 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms