RNA–Protein interactions for RNA: ENST00000446933.1

KNOP1P3-201, Transcript of lysine rich nucleolar protein 1 pseudogene 3, humanhuman

BASIC

Gene KNOP1P3, Length 426 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNOP1P3-201ENST00000446933 ZCCHC17Q9NP64 241 aaKnown RBP6.18□□□□□ -1.42
KNOP1P3-201ENST00000446933 GPCPD1Q9NPB8 672 aa6.18□□□□□ -1.42
KNOP1P3-201ENST00000446933 HELLSQ9NRZ9 838 aa6.18□□□□□ -1.42
KNOP1P3-201ENST00000446933 PCDHAC2Q9Y5I4 1007 aa6.18□□□□□ -1.42
KNOP1P3-201ENST00000446933 BRCA2P51587 3418 aa6.18□□□□□ -1.42
KNOP1P3-201ENST00000446933 ZMYM6O95789 1325 aa6.18□□□□□ -1.42
KNOP1P3-201ENST00000446933 ZNF532Q9HCE3 1301 aa6.18□□□□□ -1.42
KNOP1P3-201ENST00000446933 MAGEB6P1A0A0J9YX57 407 aa6.17□□□□□ -1.42
KNOP1P3-201ENST00000446933 FAM155AB1AL88 458 aaPredicted RBP6.17□□□□□ -1.42
KNOP1P3-201ENST00000446933 ADM5C9JUS6 153 aa6.17□□□□□ -1.42
KNOP1P3-201ENST00000446933 APBB1O00213 710 aa6.17□□□□□ -1.42
KNOP1P3-201ENST00000446933 CA12O43570 354 aa6.17□□□□□ -1.42
KNOP1P3-201ENST00000446933 OATP04181 439 aa6.17□□□□□ -1.42
KNOP1P3-201ENST00000446933 CYP7A1P22680 504 aa6.17□□□□□ -1.42
KNOP1P3-201ENST00000446933 IREB2P48200 963 aaKnown RBP6.17□□□□□ -1.42
KNOP1P3-201ENST00000446933 TM4SF4P48230 202 aa6.17□□□□□ -1.42
KNOP1P3-201ENST00000446933 RGS3P49796 1198 aa6.17□□□□□ -1.42
KNOP1P3-201ENST00000446933 GABPAQ06546 454 aa6.17□□□□□ -1.42
KNOP1P3-201ENST00000446933 SBK1Q52WX2 424 aa6.17□□□□□ -1.42
KNOP1P3-201ENST00000446933 ZMYM1Q5SVZ6 1142 aa6.17□□□□□ -1.42
KNOP1P3-201ENST00000446933 NBPF12Q5TAG4 269 aaPredicted RBP6.17□□□□□ -1.42
KNOP1P3-201ENST00000446933 RGMBQ6NW40 437 aa6.17□□□□□ -1.42
KNOP1P3-201ENST00000446933 TATDN1Q6P1N9 297 aa6.17□□□□□ -1.42
KNOP1P3-201ENST00000446933 SH3BP5LQ7L8J4 393 aa6.17□□□□□ -1.42
KNOP1P3-201ENST00000446933 METTL3Q86U44 580 aaKnown RBP6.17□□□□□ -1.42
KNOP1P3-201ENST00000446933 OTUD7AQ8TE49 926 aaPredicted RBP6.17□□□□□ -1.42
KNOP1P3-201ENST00000446933 SH3RF3Q8TEJ3 882 aaPredicted RBP6.17□□□□□ -1.42
KNOP1P3-201ENST00000446933 STRBPQ96SI9 672 aaKnown RBP6.17□□□□□ -1.42
KNOP1P3-201ENST00000446933 CRNKL1Q9BZJ0 848 aaKnown RBP6.17□□□□□ -1.42
KNOP1P3-201ENST00000446933 LNPKQ9C0E8 428 aa6.17□□□□□ -1.42
KNOP1P3-201ENST00000446933 TMEM39BQ9GZU3 492 aa6.17□□□□□ -1.42
KNOP1P3-201ENST00000446933 PPP4R2Q9NY27 417 aa6.17□□□□□ -1.42
KNOP1P3-201ENST00000446933 ADGRG1Q9Y653 693 aa6.17□□□□□ -1.42
KNOP1P3-201ENST00000446933 SIPA1L1O43166 1804 aa6.17□□□□□ -1.42
KNOP1P3-201ENST00000446933 FLT1P17948 1338 aa6.17□□□□□ -1.42
KNOP1P3-201ENST00000446933 OTOFQ9HC10 1997 aa6.17□□□□□ -1.42
KNOP1P3-201ENST00000446933 PHIPQ8WWQ0 1821 aa6.16□□□□□ -1.42
KNOP1P3-201ENST00000446933 CLRN2A0PK11 232 aa6.16□□□□□ -1.42
KNOP1P3-201ENST00000446933 TCP10L2B9ZVM9 353 aa6.16□□□□□ -1.42
KNOP1P3-201ENST00000446933 PATL2C9JE40 543 aaKnown RBP6.16□□□□□ -1.42
KNOP1P3-201ENST00000446933 POTEB2H3BUK9 544 aa6.16□□□□□ -1.42
KNOP1P3-201ENST00000446933 EPB41L2O43491 1005 aaKnown RBP6.16□□□□□ -1.42
KNOP1P3-201ENST00000446933 NEFLP07196 543 aa6.16□□□□□ -1.42
KNOP1P3-201ENST00000446933 SLC10A3P09131 477 aa6.16□□□□□ -1.42
KNOP1P3-201ENST00000446933 FGRP09769 529 aa6.16□□□□□ -1.42
KNOP1P3-201ENST00000446933 PCP11498 1178 aaKnown RBP6.16□□□□□ -1.42
KNOP1P3-201ENST00000446933 MFAP1P55081 439 aaKnown RBP6.16□□□□□ -1.42
KNOP1P3-201ENST00000446933 HUNKP57058 714 aa6.16□□□□□ -1.42
KNOP1P3-201ENST00000446933 PPATQ06203 517 aa6.16□□□□□ -1.42
KNOP1P3-201ENST00000446933 BMP2KLQ5H9B9 411 aa6.16□□□□□ -1.42
KNOP1P3-201ENST00000446933 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.16□□□□□ -1.42
KNOP1P3-201ENST00000446933 TTC6Q86TZ1 520 aa6.16□□□□□ -1.42
KNOP1P3-201ENST00000446933 TEX11Q8IYF3 940 aa6.16□□□□□ -1.42
KNOP1P3-201ENST00000446933 PXYLP1Q8TE99 480 aa6.16□□□□□ -1.42
KNOP1P3-201ENST00000446933 OSBP2Q969R2 916 aa6.16□□□□□ -1.42
KNOP1P3-201ENST00000446933 CSRNP1Q96S65 589 aa6.16□□□□□ -1.42
KNOP1P3-201ENST00000446933 DNAJC2Q99543 621 aaKnown RBP6.16□□□□□ -1.42
KNOP1P3-201ENST00000446933 ZNF341Q9BYN7 854 aa6.16□□□□□ -1.42
KNOP1P3-201ENST00000446933 PUS7LQ9H0K6 701 aaKnown RBP6.16□□□□□ -1.42
KNOP1P3-201ENST00000446933 VEZTQ9HBM0 779 aa6.16□□□□□ -1.42
KNOP1P3-201ENST00000446933 DCP1AQ9NPI6 582 aaPredicted RBP6.16□□□□□ -1.42
KNOP1P3-201ENST00000446933 DDX4Q9NQI0 724 aaKnown RBP6.16□□□□□ -1.42
KNOP1P3-201ENST00000446933 SAGE1Q9NXZ1 904 aa6.16□□□□□ -1.42
KNOP1P3-201ENST00000446933 AATFQ9NY61 560 aaKnown RBP eCLIP6.16□□□□□ -1.42
KNOP1P3-201ENST00000446933 SWAP70Q9UH65 585 aa6.16□□□□□ -1.42
KNOP1P3-201ENST00000446933 ANAPC4Q9UJX5 808 aa6.16□□□□□ -1.42
KNOP1P3-201ENST00000446933 SYNPO2Q9UMS6 1093 aa6.16□□□□□ -1.42
KNOP1P3-201ENST00000446933 ROBO3Q96MS0 1386 aa6.16□□□□□ -1.42
KNOP1P3-201ENST00000446933 PTPRFP10586 1907 aa6.15□□□□□ -1.42
KNOP1P3-201ENST00000446933 BAZ2AQ9UIF9 1905 aaKnown RBP6.15□□□□□ -1.42
KNOP1P3-201ENST00000446933 DDTLA6NHG4 134 aaPredicted RBP6.15□□□□□ -1.42
KNOP1P3-201ENST00000446933 SPDYE5A6NIY4 337 aa6.15□□□□□ -1.42
KNOP1P3-201ENST00000446933 GSG1L2A8MUP6 293 aa6.15□□□□□ -1.42
KNOP1P3-201ENST00000446933 CXCL11O14625 94 aa6.15□□□□□ -1.42
KNOP1P3-201ENST00000446933 VEGFBP49765 207 aa6.15□□□□□ -1.42
KNOP1P3-201ENST00000446933 MAP2K1Q02750 393 aaPredicted RBP6.15□□□□□ -1.42
KNOP1P3-201ENST00000446933 MCMDC2Q4G0Z9 681 aa6.15□□□□□ -1.42
KNOP1P3-201ENST00000446933 SH3D19Q5HYK7 790 aa6.15□□□□□ -1.42
KNOP1P3-201ENST00000446933 TTC22Q5TAA0 569 aa6.15□□□□□ -1.42
KNOP1P3-201ENST00000446933 C12orf60Q5U649 245 aa6.15□□□□□ -1.42
KNOP1P3-201ENST00000446933 PADI6Q6TGC4 694 aa6.15□□□□□ -1.42
KNOP1P3-201ENST00000446933 ERO1BQ86YB8 467 aa6.15□□□□□ -1.42
KNOP1P3-201ENST00000446933 ZFPM1Q8IX07 1006 aa6.15□□□□□ -1.42
KNOP1P3-201ENST00000446933 TGFBRAP1Q8WUH2 860 aa6.15□□□□□ -1.42
KNOP1P3-201ENST00000446933 AIDAQ96BJ3 306 aa6.15□□□□□ -1.42
KNOP1P3-201ENST00000446933 EDC3Q96F86 508 aaKnown RBP6.15□□□□□ -1.42
KNOP1P3-201ENST00000446933 CCDC136Q96JN2 1154 aa6.15□□□□□ -1.42
KNOP1P3-201ENST00000446933 WDR18Q9BV38 432 aa6.15□□□□□ -1.42
KNOP1P3-201ENST00000446933 ARPP21Q9UBL0 812 aaPredicted RBP6.15□□□□□ -1.42
KNOP1P3-201ENST00000446933 SERPINB13Q9UIV8 391 aa6.15□□□□□ -1.42
KNOP1P3-201ENST00000446933 KCNH4Q9UQ05 1017 aa6.15□□□□□ -1.42
KNOP1P3-201ENST00000446933 SLC45A1Q9Y2W3 748 aa6.15□□□□□ -1.42
KNOP1P3-201ENST00000446933 NDUFB9Q9Y6M9 179 aa6.15□□□□□ -1.42
KNOP1P3-201ENST00000446933 RAD50Q92878 1312 aa6.15□□□□□ -1.43
KNOP1P3-201ENST00000446933 WDR33Q9C0J8 1336 aaKnown RBP6.15□□□□□ -1.43
KNOP1P3-201ENST00000446933 DOCK1Q14185 1865 aa6.15□□□□□ -1.43
KNOP1P3-201ENST00000446933 NAV1Q8NEY1 1877 aa6.15□□□□□ -1.43
KNOP1P3-201ENST00000446933 MYH8P13535 1937 aa6.15□□□□□ -1.43
KNOP1P3-201ENST00000446933 GREB1LQ9C091 1923 aaPredicted RBP6.15□□□□□ -1.43
KNOP1P3-201ENST00000446933 ATAD5Q96QE3 1844 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms