RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 EIF4A1P60842 406 aaKnown RBP9.54□□□□□ -0.88
PTPN3-204ENST00000446349 CTAGE6Q86UF2 777 aa9.54□□□□□ -0.88
PTPN3-204ENST00000446349 CTAGE4Q8IX94 777 aa9.54□□□□□ -0.88
PTPN3-204ENST00000446349 UBXN1Q04323 297 aa9.54□□□□□ -0.88
PTPN3-204ENST00000446349 C20orf194Q5TEA3 1177 aa9.54□□□□□ -0.88
PTPN3-204ENST00000446349 ARHGEF16Q5VV41 709 aa9.54□□□□□ -0.88
PTPN3-204ENST00000446349 CCDC84Q86UT8 332 aaPredicted RBP9.54□□□□□ -0.88
PTPN3-204ENST00000446349 PCDHB13Q9Y5F0 798 aa9.54□□□□□ -0.88
PTPN3-204ENST00000446349 SOS2Q07890 1332 aaPredicted RBP9.53□□□□□ -0.88
PTPN3-204ENST00000446349 NEURL1BA8MQ27 555 aa9.53□□□□□ -0.88
PTPN3-204ENST00000446349 ADCY5O95622 1261 aa9.53□□□□□ -0.88
PTPN3-204ENST00000446349 TAOK1Q7L7X3 1001 aa9.53□□□□□ -0.88
PTPN3-204ENST00000446349 CCDC50Q8IVM0 306 aa9.53□□□□□ -0.88
PTPN3-204ENST00000446349 PRPF31Q8WWY3 499 aaKnown RBP9.53□□□□□ -0.88
PTPN3-204ENST00000446349 KIFC2Q96AC6 838 aa9.53□□□□□ -0.88
PTPN3-204ENST00000446349 ZKSCAN3Q9BRR0 538 aa9.53□□□□□ -0.88
PTPN3-204ENST00000446349 PANK2Q9BZ23 570 aa9.53□□□□□ -0.88
PTPN3-204ENST00000446349 DHX36Q9H2U1 1008 aaKnown RBP9.53□□□□□ -0.88
PTPN3-204ENST00000446349 SPOUT1Q5T280 376 aaKnown RBP9.53□□□□□ -0.88
PTPN3-204ENST00000446349 ARFGAP2Q8N6H7 521 aa9.53□□□□□ -0.88
PTPN3-204ENST00000446349 TM6SF1Q9BZW5 370 aa9.53□□□□□ -0.88
PTPN3-204ENST00000446349 STIM2Q9P246 746 aa9.53□□□□□ -0.88
PTPN3-204ENST00000446349 UNC5CLQ8IV45 518 aa9.53□□□□□ -0.88
PTPN3-204ENST00000446349 TRPC6Q9Y210 931 aa9.53□□□□□ -0.88
PTPN3-204ENST00000446349 PPEF1O14829 653 aaPredicted RBP9.53□□□□□ -0.88
PTPN3-204ENST00000446349 PFDN6O15212 129 aa9.53□□□□□ -0.88
PTPN3-204ENST00000446349 MYCLP12524 364 aaPredicted RBP9.53□□□□□ -0.88
PTPN3-204ENST00000446349 GNG11P61952 73 aa9.53□□□□□ -0.88
PTPN3-204ENST00000446349 INF2Q27J81 1249 aa9.53□□□□□ -0.88
PTPN3-204ENST00000446349 AGTPBP1Q9UPW5 1226 aa9.53□□□□□ -0.88
PTPN3-204ENST00000446349 A6NNZ2 444 aa9.53□□□□□ -0.88
PTPN3-204ENST00000446349 TRAF5O00463 557 aa9.53□□□□□ -0.88
PTPN3-204ENST00000446349 CALCOCO2Q13137 446 aa9.53□□□□□ -0.88
PTPN3-204ENST00000446349 PPP2R5AQ15172 486 aa9.53□□□□□ -0.88
PTPN3-204ENST00000446349 TUBB8Q3ZCM7 444 aa9.53□□□□□ -0.88
PTPN3-204ENST00000446349 CERKLQ49MI3 558 aaPredicted RBP9.53□□□□□ -0.88
PTPN3-204ENST00000446349 MAATS1Q7Z4T9 603 aa9.53□□□□□ -0.88
PTPN3-204ENST00000446349 ANKS4BQ8N8V4 417 aa9.53□□□□□ -0.88
PTPN3-204ENST00000446349 RNF34Q969K3 372 aa9.53□□□□□ -0.88
PTPN3-204ENST00000446349 SPHKAPQ2M3C7 1700 aa9.53□□□□□ -0.88
PTPN3-204ENST00000446349 GMNNO75496 209 aa9.53□□□□□ -0.88
PTPN3-204ENST00000446349 DDAH1O94760 285 aa9.53□□□□□ -0.88
PTPN3-204ENST00000446349 POLR2BP30876 1174 aaKnown RBP9.53□□□□□ -0.88
PTPN3-204ENST00000446349 YARSP54577 528 aaKnown RBP9.53□□□□□ -0.88
PTPN3-204ENST00000446349 PLCB3Q01970 1234 aa9.53□□□□□ -0.88
PTPN3-204ENST00000446349 SYCE1Q8N0S2 351 aa9.53□□□□□ -0.88
PTPN3-204ENST00000446349 MLKLQ8NB16 471 aa9.53□□□□□ -0.88
PTPN3-204ENST00000446349 ZBTB21Q9ULJ3 1066 aa9.53□□□□□ -0.88
PTPN3-204ENST00000446349 APOBRQ0VD83 1088 aa9.53□□□□□ -0.88
PTPN3-204ENST00000446349 PPP2R5EQ16537 467 aa9.53□□□□□ -0.88
PTPN3-204ENST00000446349 AKNAD1Q5T1N1 836 aa9.53□□□□□ -0.88
PTPN3-204ENST00000446349 PLEKHM2Q8IWE5 1019 aa9.53□□□□□ -0.88
PTPN3-204ENST00000446349 TBC1D31Q96DN5 1066 aa9.53□□□□□ -0.88
PTPN3-204ENST00000446349 NRBP2Q9NSY0 501 aa9.53□□□□□ -0.88
PTPN3-204ENST00000446349 RPAP1Q9BWH6 1393 aaPredicted RBP9.53□□□□□ -0.88
PTPN3-204ENST00000446349 PRPF6O94906 941 aaKnown RBP9.52□□□□□ -0.88
PTPN3-204ENST00000446349 IVLP07476 585 aa9.52□□□□□ -0.88
PTPN3-204ENST00000446349 IREB2P48200 963 aaKnown RBP9.52□□□□□ -0.88
PTPN3-204ENST00000446349 TFDP1Q14186 410 aa9.52□□□□□ -0.88
PTPN3-204ENST00000446349 MAP7D1Q3KQU3 841 aa9.52□□□□□ -0.88
PTPN3-204ENST00000446349 DAPK3O43293 454 aa9.52□□□□□ -0.88
PTPN3-204ENST00000446349 POLR2MP0CAP2 368 aa9.52□□□□□ -0.88
PTPN3-204ENST00000446349 NPR1P16066 1061 aa9.52□□□□□ -0.88
PTPN3-204ENST00000446349 CUL4BQ13620 913 aa9.52□□□□□ -0.88
PTPN3-204ENST00000446349 PDZD4Q76G19 769 aaPredicted RBP9.52□□□□□ -0.88
PTPN3-204ENST00000446349 CCDC110Q8TBZ0 833 aa9.52□□□□□ -0.88
PTPN3-204ENST00000446349 CCDC114Q96M63 670 aa9.52□□□□□ -0.88
PTPN3-204ENST00000446349 FAM204AQ9H8W3 233 aa9.52□□□□□ -0.88
PTPN3-204ENST00000446349 MLXIPQ9HAP2 919 aa9.52□□□□□ -0.88
PTPN3-204ENST00000446349 TSKSQ9UJT2 592 aa9.52□□□□□ -0.88
PTPN3-204ENST00000446349 LAD1O00515 517 aa9.52□□□□□ -0.89
PTPN3-204ENST00000446349 GAS7O60861 476 aa9.52□□□□□ -0.89
PTPN3-204ENST00000446349 ASPRV1Q53RT3 343 aa9.52□□□□□ -0.89
PTPN3-204ENST00000446349 TTC38Q5R3I4 469 aa9.52□□□□□ -0.89
PTPN3-204ENST00000446349 CLEC4GQ6UXB4 293 aa9.52□□□□□ -0.89
PTPN3-204ENST00000446349 FAM193BQ96PV7 902 aaPredicted RBP9.52□□□□□ -0.89
PTPN3-204ENST00000446349 CARD14Q9BXL6 1004 aa9.52□□□□□ -0.89
PTPN3-204ENST00000446349 AP5M1Q9H0R1 490 aa9.52□□□□□ -0.89
PTPN3-204ENST00000446349 ARMT1Q9H993 441 aa9.52□□□□□ -0.89
PTPN3-204ENST00000446349 A1BGP04217 495 aa9.52□□□□□ -0.89
PTPN3-204ENST00000446349 KRT5P13647 590 aa9.52□□□□□ -0.89
PTPN3-204ENST00000446349 ERCC5P28715 1186 aaPredicted RBP9.52□□□□□ -0.89
PTPN3-204ENST00000446349 SLC27A3Q5K4L6 730 aa9.52□□□□□ -0.89
PTPN3-204ENST00000446349 GSDMBQ8TAX9 411 aa9.52□□□□□ -0.89
PTPN3-204ENST00000446349 GIPC1O14908 333 aa9.52□□□□□ -0.89
PTPN3-204ENST00000446349 TNFAIP3P21580 790 aa9.52□□□□□ -0.89
PTPN3-204ENST00000446349 AK2P54819 239 aa9.52□□□□□ -0.89
PTPN3-204ENST00000446349 GTF2IP78347 998 aa9.52□□□□□ -0.89
PTPN3-204ENST00000446349 MAP7Q14244 749 aa9.52□□□□□ -0.89
PTPN3-204ENST00000446349 NECAB1Q8N987 351 aa9.52□□□□□ -0.89
PTPN3-204ENST00000446349 PHACTR3Q96KR7 559 aa9.52□□□□□ -0.89
PTPN3-204ENST00000446349 BIRC2Q13490 618 aa9.52□□□□□ -0.89
PTPN3-204ENST00000446349 ARHGAP31Q2M1Z3 1444 aa9.52□□□□□ -0.89
PTPN3-204ENST00000446349 ARL1P40616 181 aaPredicted RBP9.52□□□□□ -0.89
PTPN3-204ENST00000446349 MYL5Q02045 173 aa9.52□□□□□ -0.89
PTPN3-204ENST00000446349 CCT6BQ92526 530 aa9.52□□□□□ -0.89
PTPN3-204ENST00000446349 GOLGA8CPA6NN73 597 aa9.51□□□□□ -0.89
PTPN3-204ENST00000446349 ACTN4O43707 911 aaKnown RBP9.51□□□□□ -0.89
PTPN3-204ENST00000446349 GIGYF1O75420 1035 aaPredicted RBP9.51□□□□□ -0.89
PTPN3-204ENST00000446349 MARCKSP29966 332 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms