RNA–Protein interactions for RNA: ENST00000444532.2

CCDC188-202, Transcript of coiled-coil domain containing 188, humanhuman

TSL 3

Gene CCDC188, Length 628 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-202ENST00000444532 DDRGK1Q96HY6 314 aa22.42■■□□□ 1.18
CCDC188-202ENST00000444532 SLC45A1Q9Y2W3 748 aa22.42■■□□□ 1.18
CCDC188-202ENST00000444532 PRKAB2O43741 272 aa22.41■■□□□ 1.18
CCDC188-202ENST00000444532 GDF11O95390 407 aa22.41■■□□□ 1.18
CCDC188-202ENST00000444532 PDE1AP54750 535 aa22.41■■□□□ 1.18
CCDC188-202ENST00000444532 JAG1P78504 1218 aa22.41■■□□□ 1.18
CCDC188-202ENST00000444532 GABPAQ06546 454 aa22.41■■□□□ 1.18
CCDC188-202ENST00000444532 PROCA1Q8NCQ7 364 aaPredicted RBP22.41■■□□□ 1.18
CCDC188-202ENST00000444532 SLC4A4Q9Y6R1 1079 aa22.41■■□□□ 1.18
CCDC188-202ENST00000444532 ARHGEF6Q15052 776 aa22.4■■□□□ 1.18
CCDC188-202ENST00000444532 CERKLQ49MI3 558 aaPredicted RBP22.4■■□□□ 1.18
CCDC188-202ENST00000444532 AMOTL1Q8IY63 956 aa22.4■■□□□ 1.18
CCDC188-202ENST00000444532 STRBPQ96SI9 672 aaKnown RBP22.4■■□□□ 1.18
CCDC188-202ENST00000444532 PARK7Q99497 189 aaKnown RBP22.4■■□□□ 1.18
CCDC188-202ENST00000444532 LNPKQ9C0E8 428 aa22.4■■□□□ 1.18
CCDC188-202ENST00000444532 ZBTB21Q9ULJ3 1066 aa22.4■■□□□ 1.18
CCDC188-202ENST00000444532 BAZ2AQ9UIF9 1905 aaKnown RBP22.39■■□□□ 1.18
CCDC188-202ENST00000444532 SHMT1P34896 483 aa22.39■■□□□ 1.17
CCDC188-202ENST00000444532 NUCB1Q02818 461 aa22.39■■□□□ 1.17
CCDC188-202ENST00000444532 SH3D19Q5HYK7 790 aa22.39■■□□□ 1.17
CCDC188-202ENST00000444532 B4GALNT3Q6L9W6 998 aa22.39■■□□□ 1.17
CCDC188-202ENST00000444532 C17orf99Q6UX52 265 aa22.39■■□□□ 1.17
CCDC188-202ENST00000444532 CD99L2Q8TCZ2 262 aa22.39■■□□□ 1.17
CCDC188-202ENST00000444532 OSBP2Q969R2 916 aa22.39■■□□□ 1.17
CCDC188-202ENST00000444532 FSD1Q9BTV5 496 aa22.39■■□□□ 1.17
CCDC188-202ENST00000444532 AGTPBP1Q9UPW5 1226 aa22.39■■□□□ 1.17
CCDC188-202ENST00000444532 GH2P01242 217 aa22.38■■□□□ 1.17
CCDC188-202ENST00000444532 FBXO46Q6PJ61 603 aaPredicted RBP22.38■■□□□ 1.17
CCDC188-202ENST00000444532 OTOP1Q7RTM1 612 aa22.38■■□□□ 1.17
CCDC188-202ENST00000444532 CHD1LQ86WJ1 897 aa22.38■■□□□ 1.17
CCDC188-202ENST00000444532 SWAP70Q9UH65 585 aa22.38■■□□□ 1.17
CCDC188-202ENST00000444532 LOC285556D6RIA3 1793 aa22.38■■□□□ 1.17
CCDC188-202ENST00000444532 ADGRA2Q96PE1 1338 aa22.37■■□□□ 1.17
CCDC188-202ENST00000444532 C19orf81C9J6K1 198 aa22.37■■□□□ 1.17
CCDC188-202ENST00000444532 GNAT2P19087 354 aa22.37■■□□□ 1.17
CCDC188-202ENST00000444532 HMGCS2P54868 508 aa22.37■■□□□ 1.17
CCDC188-202ENST00000444532 BACE1P56817 501 aa22.37■■□□□ 1.17
CCDC188-202ENST00000444532 ABCB5Q2M3G0 1257 aa22.37■■□□□ 1.17
CCDC188-202ENST00000444532 SHROOM1Q2M3G4 852 aaPredicted RBP22.37■■□□□ 1.17
CCDC188-202ENST00000444532 C12orf60Q5U649 245 aa22.37■■□□□ 1.17
CCDC188-202ENST00000444532 GIMAP6Q6P9H5 292 aa22.37■■□□□ 1.17
CCDC188-202ENST00000444532 EVI5LQ96CN4 794 aa22.37■■□□□ 1.17
CCDC188-202ENST00000444532 EFCC1Q9HA90 598 aa22.37■■□□□ 1.17
CCDC188-202ENST00000444532 CABP5Q9NP86 173 aa22.37■■□□□ 1.17
CCDC188-202ENST00000444532 TRIM17Q9Y577 477 aa22.37■■□□□ 1.17
CCDC188-202ENST00000444532 USP17L10C9JJH3 530 aa22.36■■□□□ 1.17
CCDC188-202ENST00000444532 USP17L12C9JPN9 530 aa22.36■■□□□ 1.17
CCDC188-202ENST00000444532 USP17L21D6R901 530 aa22.36■■□□□ 1.17
CCDC188-202ENST00000444532 CYP2D6P10635 497 aa22.36■■□□□ 1.17
CCDC188-202ENST00000444532 IRX6P78412 446 aaPredicted RBP22.36■■□□□ 1.17
CCDC188-202ENST00000444532 PABPC4Q13310 644 aaKnown RBP eCLIP22.36■■□□□ 1.17
CCDC188-202ENST00000444532 KIF22Q14807 665 aa22.36■■□□□ 1.17
CCDC188-202ENST00000444532 TICAM2Q86XR7 235 aa22.36■■□□□ 1.17
CCDC188-202ENST00000444532 CPA4Q9UI42 421 aa22.36■■□□□ 1.17
CCDC188-202ENST00000444532 PNMA3Q9UL41 463 aa22.36■■□□□ 1.17
CCDC188-202ENST00000444532 CCDC85CA6NKD9 419 aa22.35■■□□□ 1.17
CCDC188-202ENST00000444532 GPAA1O43292 621 aa22.35■■□□□ 1.17
CCDC188-202ENST00000444532 CYP2C8P10632 490 aa22.35■■□□□ 1.17
CCDC188-202ENST00000444532 LACTBP83111 547 aaPredicted RBP22.35■■□□□ 1.17
CCDC188-202ENST00000444532 MTMR2Q13614 643 aa22.35■■□□□ 1.17
CCDC188-202ENST00000444532 CTR9Q6PD62 1173 aa22.35■■□□□ 1.17
CCDC188-202ENST00000444532 TMOD4Q9NZQ9 345 aa22.35■■□□□ 1.17
CCDC188-202ENST00000444532 MYH8P13535 1937 aa22.34■■□□□ 1.17
CCDC188-202ENST00000444532 GSG1L2A8MUP6 293 aa22.34■■□□□ 1.17
CCDC188-202ENST00000444532 EVX2Q03828 476 aa22.34■■□□□ 1.17
CCDC188-202ENST00000444532 RAB3GAP1Q15042 981 aa22.34■■□□□ 1.17
CCDC188-202ENST00000444532 SBK1Q52WX2 424 aa22.34■■□□□ 1.17
CCDC188-202ENST00000444532 ZMYM1Q5SVZ6 1142 aa22.34■■□□□ 1.17
CCDC188-202ENST00000444532 TREML2Q5T2D2 321 aa22.34■■□□□ 1.17
CCDC188-202ENST00000444532 ARPP21Q9UBL0 812 aaPredicted RBP22.34■■□□□ 1.17
CCDC188-202ENST00000444532 HPS5Q9UPZ3 1129 aa22.34■■□□□ 1.17
CCDC188-202ENST00000444532 M0R2C6 588 aa22.33■■□□□ 1.17
CCDC188-202ENST00000444532 GNRH1P01148 92 aa22.33■■□□□ 1.17
CCDC188-202ENST00000444532 DYNLL2Q96FJ2 89 aa22.33■■□□□ 1.17
CCDC188-202ENST00000444532 OSBPL3Q9H4L5 887 aa22.33■■□□□ 1.17
CCDC188-202ENST00000444532 CYP2D7A0A087X1C5 515 aa22.32■■□□□ 1.16
CCDC188-202ENST00000444532 PATL2C9JE40 543 aaKnown RBP22.32■■□□□ 1.16
CCDC188-202ENST00000444532 BCRP11274 1271 aa22.32■■□□□ 1.16
CCDC188-202ENST00000444532 OSBPP22059 807 aa22.32■■□□□ 1.16
CCDC188-202ENST00000444532 CAP1Q01518 475 aa22.32■■□□□ 1.16
CCDC188-202ENST00000444532 USP17L2Q6R6M4 530 aa22.32■■□□□ 1.16
CCDC188-202ENST00000444532 C16orf86Q6ZW13 317 aa22.32■■□□□ 1.16
CCDC188-202ENST00000444532 PLEKHM2Q8IWE5 1019 aa22.32■■□□□ 1.16
CCDC188-202ENST00000444532 SMCR8Q8TEV9 937 aaPredicted RBP22.32■■□□□ 1.16
CCDC188-202ENST00000444532 PTPN22Q9Y2R2 807 aa22.32■■□□□ 1.16
CCDC188-202ENST00000444532 HOXA7P31268 230 aaPredicted RBP22.31■■□□□ 1.16
CCDC188-202ENST00000444532 CDK8P49336 464 aa22.31■■□□□ 1.16
CCDC188-202ENST00000444532 SLC44A5Q8NCS7 719 aa22.31■■□□□ 1.16
CCDC188-202ENST00000444532 CCDC17Q96LX7 622 aa22.31■■□□□ 1.16
CCDC188-202ENST00000444532 SEC62Q99442 399 aaKnown RBP22.31■■□□□ 1.16
CCDC188-202ENST00000444532 MPHOSPH10O00566 681 aaKnown RBP22.3■■□□□ 1.16
CCDC188-202ENST00000444532 APPP05067 770 aa22.3■■□□□ 1.16
CCDC188-202ENST00000444532 GUCY1A2P33402 732 aa22.3■■□□□ 1.16
CCDC188-202ENST00000444532 USP14P54578 494 aa22.3■■□□□ 1.16
CCDC188-202ENST00000444532 TMEM179Q6ZVK1 233 aa22.3■■□□□ 1.16
CCDC188-202ENST00000444532 ASCC2Q9H1I8 757 aaPredicted RBP22.3■■□□□ 1.16
CCDC188-202ENST00000444532 GCLCP48506 637 aaPredicted RBP22.29■■□□□ 1.16
CCDC188-202ENST00000444532 SEPT2Q15019 361 aa22.29■■□□□ 1.16
CCDC188-202ENST00000444532 C12orf42Q96LP6 360 aa22.29■■□□□ 1.16
CCDC188-202ENST00000444532 FEZ1Q99689 392 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms