RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 ARMT1Q9H993 441 aa22.72■■□□□ 1.23
ATPAF2-201ENST00000444058 MCM9Q9NXL9 1143 aa22.72■■□□□ 1.23
ATPAF2-201ENST00000444058 ATAD5Q96QE3 1844 aa22.72■■□□□ 1.23
ATPAF2-201ENST00000444058 ERC2O15083 957 aa22.71■■□□□ 1.23
ATPAF2-201ENST00000444058 MBD4O95243 580 aa22.71■■□□□ 1.23
ATPAF2-201ENST00000444058 HMGCS2P54868 508 aa22.71■■□□□ 1.23
ATPAF2-201ENST00000444058 GABPAQ06546 454 aa22.71■■□□□ 1.23
ATPAF2-201ENST00000444058 SLC4A8Q2Y0W8 1093 aa22.71■■□□□ 1.23
ATPAF2-201ENST00000444058 SDR42E1Q8WUS8 393 aa22.71■■□□□ 1.23
ATPAF2-201ENST00000444058 DDX60LQ5H9U9 1706 aaKnown RBP22.71■■□□□ 1.23
ATPAF2-201ENST00000444058 USP17L10C9JJH3 530 aa22.7■■□□□ 1.22
ATPAF2-201ENST00000444058 GDF11O95390 407 aa22.7■■□□□ 1.22
ATPAF2-201ENST00000444058 TREML2Q5T2D2 321 aa22.7■■□□□ 1.22
ATPAF2-201ENST00000444058 SMCR8Q8TEV9 937 aaPredicted RBP22.7■■□□□ 1.22
ATPAF2-201ENST00000444058 ARMC5Q96C12 935 aa22.7■■□□□ 1.22
ATPAF2-201ENST00000444058 GLRX3O76003 335 aaKnown RBP22.69■■□□□ 1.22
ATPAF2-201ENST00000444058 ZFYP08048 801 aaPredicted RBP22.69■■□□□ 1.22
ATPAF2-201ENST00000444058 SHMT1P34896 483 aa22.69■■□□□ 1.22
ATPAF2-201ENST00000444058 MLLT1Q03111 559 aaPredicted RBP22.69■■□□□ 1.22
ATPAF2-201ENST00000444058 MTMR2Q13614 643 aa22.69■■□□□ 1.22
ATPAF2-201ENST00000444058 CERKLQ49MI3 558 aaPredicted RBP22.69■■□□□ 1.22
ATPAF2-201ENST00000444058 ARHGAP39Q9C0H5 1083 aa22.69■■□□□ 1.22
ATPAF2-201ENST00000444058 LOC285556D6RIA3 1793 aa22.68■■□□□ 1.22
ATPAF2-201ENST00000444058 GH2P01242 217 aa22.68■■□□□ 1.22
ATPAF2-201ENST00000444058 HOXD10P28358 340 aa22.68■■□□□ 1.22
ATPAF2-201ENST00000444058 HOXA7P31268 230 aaPredicted RBP22.68■■□□□ 1.22
ATPAF2-201ENST00000444058 PSMC4P43686 418 aa22.68■■□□□ 1.22
ATPAF2-201ENST00000444058 LRRFIP1Q32MZ4 808 aaKnown RBP22.68■■□□□ 1.22
ATPAF2-201ENST00000444058 SLFNL1Q499Z3 407 aa22.68■■□□□ 1.22
ATPAF2-201ENST00000444058 DDRGK1Q96HY6 314 aa22.68■■□□□ 1.22
ATPAF2-201ENST00000444058 TMOD4Q9NZQ9 345 aa22.68■■□□□ 1.22
ATPAF2-201ENST00000444058 ZBTB47Q9UFB7 747 aaPredicted RBP22.68■■□□□ 1.22
ATPAF2-201ENST00000444058 SWAP70Q9UH65 585 aa22.68■■□□□ 1.22
ATPAF2-201ENST00000444058 MX1P20591 662 aa22.67■■□□□ 1.22
ATPAF2-201ENST00000444058 OSBPP22059 807 aa22.67■■□□□ 1.22
ATPAF2-201ENST00000444058 GCLCP48506 637 aaPredicted RBP22.67■■□□□ 1.22
ATPAF2-201ENST00000444058 SOX10P56693 466 aa22.67■■□□□ 1.22
ATPAF2-201ENST00000444058 ABCB5Q2M3G0 1257 aa22.67■■□□□ 1.22
ATPAF2-201ENST00000444058 TSHZ3Q63HK5 1081 aa22.67■■□□□ 1.22
ATPAF2-201ENST00000444058 PI4K2BQ8TCG2 481 aa22.67■■□□□ 1.22
ATPAF2-201ENST00000444058 TRIM47Q96LD4 638 aa22.67■■□□□ 1.22
ATPAF2-201ENST00000444058 PUS7LQ9H0K6 701 aaKnown RBP22.67■■□□□ 1.22
ATPAF2-201ENST00000444058 CABP5Q9NP86 173 aa22.67■■□□□ 1.22
ATPAF2-201ENST00000444058 NAV1Q8NEY1 1877 aa22.66■■□□□ 1.22
ATPAF2-201ENST00000444058 HTTP42858 3142 aa22.66■■□□□ 1.22
ATPAF2-201ENST00000444058 RNF113AO15541 343 aaKnown RBP22.66■■□□□ 1.22
ATPAF2-201ENST00000444058 PRKAB2O43741 272 aa22.66■■□□□ 1.22
ATPAF2-201ENST00000444058 CHGBP05060 677 aa22.66■■□□□ 1.22
ATPAF2-201ENST00000444058 CTGFP29279 349 aa22.66■■□□□ 1.22
ATPAF2-201ENST00000444058 FCGRTP55899 365 aa22.66■■□□□ 1.22
ATPAF2-201ENST00000444058 SHROOM1Q2M3G4 852 aaPredicted RBP22.66■■□□□ 1.22
ATPAF2-201ENST00000444058 NBPF11Q86T75 865 aa22.66■■□□□ 1.22
ATPAF2-201ENST00000444058 AMOTL1Q8IY63 956 aa22.66■■□□□ 1.22
ATPAF2-201ENST00000444058 SRRDQ9UH36 339 aa22.66■■□□□ 1.22
ATPAF2-201ENST00000444058 PTCH2Q9Y6C5 1203 aa22.66■■□□□ 1.22
ATPAF2-201ENST00000444058 MYH7P12883 1935 aa22.66■■□□□ 1.22
ATPAF2-201ENST00000444058 SALL3Q9BXA9 1300 aa22.65■■□□□ 1.22
ATPAF2-201ENST00000444058 FMNL1O95466 1100 aaPredicted RBP22.65■■□□□ 1.22
ATPAF2-201ENST00000444058 FAM110CQ1W6H9 321 aa22.65■■□□□ 1.22
ATPAF2-201ENST00000444058 ANKRD45Q5TZF3 282 aa22.65■■□□□ 1.22
ATPAF2-201ENST00000444058 OTUD7AQ8TE49 926 aaPredicted RBP22.65■■□□□ 1.22
ATPAF2-201ENST00000444058 APPBP2Q92624 585 aa22.65■■□□□ 1.22
ATPAF2-201ENST00000444058 STRBPQ96SI9 672 aaKnown RBP22.65■■□□□ 1.22
ATPAF2-201ENST00000444058 ASCC2Q9H1I8 757 aaPredicted RBP22.65■■□□□ 1.22
ATPAF2-201ENST00000444058 SLC4A4Q9Y6R1 1079 aa22.65■■□□□ 1.22
ATPAF2-201ENST00000444058 SLC9C1Q4G0N8 1177 aa22.64■■□□□ 1.21
ATPAF2-201ENST00000444058 C12orf60Q5U649 245 aa22.64■■□□□ 1.21
ATPAF2-201ENST00000444058 USP17L2Q6R6M4 530 aa22.64■■□□□ 1.21
ATPAF2-201ENST00000444058 C12orf42Q96LP6 360 aa22.64■■□□□ 1.21
ATPAF2-201ENST00000444058 RWDD1Q9H446 243 aaPredicted RBP22.64■■□□□ 1.21
ATPAF2-201ENST00000444058 USP14P54578 494 aa22.63■■□□□ 1.21
ATPAF2-201ENST00000444058 RAB3GAP1Q15042 981 aa22.63■■□□□ 1.21
ATPAF2-201ENST00000444058 GIMAP6Q6P9H5 292 aa22.63■■□□□ 1.21
ATPAF2-201ENST00000444058 ZNF333Q96JL9 665 aa22.63■■□□□ 1.21
ATPAF2-201ENST00000444058 KIAA1683Q9H0B3 1180 aa22.63■■□□□ 1.21
ATPAF2-201ENST00000444058 EMILIN3Q9NT22 766 aa22.63■■□□□ 1.21
ATPAF2-201ENST00000444058 STAP2Q9UGK3 403 aa22.63■■□□□ 1.21
ATPAF2-201ENST00000444058 USP17L12C9JPN9 530 aa22.62■■□□□ 1.21
ATPAF2-201ENST00000444058 USP17L21D6R901 530 aa22.62■■□□□ 1.21
ATPAF2-201ENST00000444058 CYP2D6P10635 497 aa22.62■■□□□ 1.21
ATPAF2-201ENST00000444058 IRX3P78415 501 aaPredicted RBP22.62■■□□□ 1.21
ATPAF2-201ENST00000444058 SMC5Q8IY18 1101 aa22.62■■□□□ 1.21
ATPAF2-201ENST00000444058 ANKRD13CQ8N6S4 541 aa22.62■■□□□ 1.21
ATPAF2-201ENST00000444058 OSBP2Q969R2 916 aa22.62■■□□□ 1.21
ATPAF2-201ENST00000444058 GNAT2P19087 354 aa22.61■■□□□ 1.21
ATPAF2-201ENST00000444058 GUCY1A2P33402 732 aa22.61■■□□□ 1.21
ATPAF2-201ENST00000444058 TMEM179Q6ZVK1 233 aa22.61■■□□□ 1.21
ATPAF2-201ENST00000444058 CCDC17Q96LX7 622 aa22.61■■□□□ 1.21
ATPAF2-201ENST00000444058 FEZ1Q99689 392 aa22.61■■□□□ 1.21
ATPAF2-201ENST00000444058 ARPP21Q9UBL0 812 aaPredicted RBP22.61■■□□□ 1.21
ATPAF2-201ENST00000444058 MYPNQ86TC9 1320 aa22.6■■□□□ 1.21
ATPAF2-201ENST00000444058 EVX2Q03828 476 aa22.6■■□□□ 1.21
ATPAF2-201ENST00000444058 SBK1Q52WX2 424 aa22.6■■□□□ 1.21
ATPAF2-201ENST00000444058 CTR9Q6PD62 1173 aa22.6■■□□□ 1.21
ATPAF2-201ENST00000444058 GTF3C2Q8WUA4 911 aaPredicted RBP22.6■■□□□ 1.21
ATPAF2-201ENST00000444058 MORF4L1Q9UBU8 362 aa22.6■■□□□ 1.21
ATPAF2-201ENST00000444058 ZSWIM8A7E2V4 1837 aa22.59■■□□□ 1.21
ATPAF2-201ENST00000444058 GSG1L2A8MUP6 293 aa22.59■■□□□ 1.21
ATPAF2-201ENST00000444058 SEPT2Q15019 361 aa22.59■■□□□ 1.21
ATPAF2-201ENST00000444058 C16orf86Q6ZW13 317 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms