RNA–Protein interactions for RNA: ENST00000443816.5

FN1-211, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,762 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-211ENST00000443816 ZEB2O60315 1214 aa12.53□□□□□ -0.4
FN1-211ENST00000443816 GAS7O60861 476 aa12.53□□□□□ -0.4
FN1-211ENST00000443816 TUBB4AP04350 444 aa12.53□□□□□ -0.4
FN1-211ENST00000443816 GABPAQ06546 454 aa12.53□□□□□ -0.4
FN1-211ENST00000443816 CCDC24Q8N4L8 307 aa12.53□□□□□ -0.4
FN1-211ENST00000443816 CCT6BQ92526 530 aa12.53□□□□□ -0.4
FN1-211ENST00000443816 MYOM2P54296 1465 aa12.53□□□□□ -0.4
FN1-211ENST00000443816 GSDMBQ8TAX9 411 aa12.53□□□□□ -0.4
FN1-211ENST00000443816 FAM200AQ8TCP9 573 aa12.53□□□□□ -0.4
FN1-211ENST00000443816 TRIM14Q14142 442 aa12.53□□□□□ -0.4
FN1-211ENST00000443816 KRT26Q7Z3Y9 468 aa12.53□□□□□ -0.4
FN1-211ENST00000443816 CNGA4Q8IV77 575 aa12.53□□□□□ -0.4
FN1-211ENST00000443816 TTC14Q96N46 770 aa12.53□□□□□ -0.4
FN1-211ENST00000443816 TESK2Q96S53 571 aa12.53□□□□□ -0.4
FN1-211ENST00000443816 KDRP35968 1356 aa12.52□□□□□ -0.4
FN1-211ENST00000443816 SLC27A2O14975 620 aa12.52□□□□□ -0.4
FN1-211ENST00000443816 RNF187Q5TA31 235 aaPredicted RBP12.52□□□□□ -0.4
FN1-211ENST00000443816 CETN3O15182 167 aa12.52□□□□□ -0.4
FN1-211ENST00000443816 GPR161Q8N6U8 529 aaKnown RBP12.52□□□□□ -0.4
FN1-211ENST00000443816 PODXL2Q9NZ53 605 aa12.52□□□□□ -0.4
FN1-211ENST00000443816 V9GY48 417 aaPredicted RBP12.52□□□□□ -0.4
FN1-211ENST00000443816 ATP7BP35670 1465 aa12.52□□□□□ -0.41
FN1-211ENST00000443816 PCP11498 1178 aaKnown RBP12.52□□□□□ -0.41
FN1-211ENST00000443816 TXKP42681 527 aa12.52□□□□□ -0.41
FN1-211ENST00000443816 SLFN12Q8IYM2 578 aa12.52□□□□□ -0.41
FN1-211ENST00000443816 NOC4LQ9BVI4 516 aaKnown RBP12.52□□□□□ -0.41
FN1-211ENST00000443816 NT5C3AQ9H0P0 336 aa12.52□□□□□ -0.41
FN1-211ENST00000443816 LEMD3Q9Y2U8 911 aa12.52□□□□□ -0.41
FN1-211ENST00000443816 ERBB4Q15303 1308 aa12.52□□□□□ -0.41
FN1-211ENST00000443816 ANKRD35Q8N283 1001 aa12.52□□□□□ -0.41
FN1-211ENST00000443816 ANKS4BQ8N8V4 417 aa12.52□□□□□ -0.41
FN1-211ENST00000443816 ITSN1Q15811 1721 aa12.52□□□□□ -0.41
FN1-211ENST00000443816 CLTCQ00610 1675 aaKnown RBP12.52□□□□□ -0.41
FN1-211ENST00000443816 CHL1O00533 1208 aa12.52□□□□□ -0.41
FN1-211ENST00000443816 INF2Q27J81 1249 aa12.52□□□□□ -0.41
FN1-211ENST00000443816 SWAP70Q9UH65 585 aa12.52□□□□□ -0.41
FN1-211ENST00000443816 CTNND2Q9UQB3 1225 aa12.52□□□□□ -0.41
FN1-211ENST00000443816 TRPC6Q9Y210 931 aa12.52□□□□□ -0.41
FN1-211ENST00000443816 XDHP47989 1333 aa12.52□□□□□ -0.41
FN1-211ENST00000443816 MAP3K15Q6ZN16 1313 aa12.52□□□□□ -0.41
FN1-211ENST00000443816 TMEM94Q12767 1356 aa12.52□□□□□ -0.41
FN1-211ENST00000443816 TNFAIP3P21580 790 aa12.51□□□□□ -0.41
FN1-211ENST00000443816 UBL4BQ8N7F7 174 aa12.51□□□□□ -0.41
FN1-211ENST00000443816 ZNF830Q96NB3 372 aaPredicted RBP12.51□□□□□ -0.41
FN1-211ENST00000443816 BRPF3Q9ULD4 1205 aa12.51□□□□□ -0.41
FN1-211ENST00000443816 CTAGE15A4D2H0 777 aa12.51□□□□□ -0.41
FN1-211ENST00000443816 CTAGE8P0CG41 777 aa12.51□□□□□ -0.41
FN1-211ENST00000443816 NONOQ15233 471 aaKnown RBP eCLIP12.51□□□□□ -0.41
FN1-211ENST00000443816 TTC38Q5R3I4 469 aa12.51□□□□□ -0.41
FN1-211ENST00000443816 MAEAQ7L5Y9 396 aa12.51□□□□□ -0.41
FN1-211ENST00000443816 CTAGE6Q86UF2 777 aa12.51□□□□□ -0.41
FN1-211ENST00000443816 CTAGE4Q8IX94 777 aa12.51□□□□□ -0.41
FN1-211ENST00000443816 SMC1BQ8NDV3 1235 aa12.51□□□□□ -0.41
FN1-211ENST00000443816 ADPGKQ9BRR6 497 aa12.51□□□□□ -0.41
FN1-211ENST00000443816 FAM204AQ9H8W3 233 aa12.51□□□□□ -0.41
FN1-211ENST00000443816 H0YCG3 227 aa12.51□□□□□ -0.41
FN1-211ENST00000443816 CRCPO75575 148 aa12.51□□□□□ -0.41
FN1-211ENST00000443816 ALDH3A1P30838 453 aa12.51□□□□□ -0.41
FN1-211ENST00000443816 ZNF496Q96IT1 587 aaPredicted RBP12.51□□□□□ -0.41
FN1-211ENST00000443816 ARID4AP29374 1257 aaPredicted RBP12.51□□□□□ -0.41
FN1-211ENST00000443816 KIF11P52732 1056 aa12.51□□□□□ -0.41
FN1-211ENST00000443816 TFAP4Q01664 338 aa12.51□□□□□ -0.41
FN1-211ENST00000443816 ZBTB8OSQ8IWT0 167 aa12.51□□□□□ -0.41
FN1-211ENST00000443816 CCDC26Q8TAB7 109 aa12.51□□□□□ -0.41
FN1-211ENST00000443816 INSRP06213 1382 aa12.51□□□□□ -0.41
FN1-211ENST00000443816 GOLGA6CA6NDK9 693 aa12.51□□□□□ -0.41
FN1-211ENST00000443816 GOLGA6BA6NDN3 693 aa12.51□□□□□ -0.41
FN1-211ENST00000443816 TCP10L2B9ZVM9 353 aa12.51□□□□□ -0.41
FN1-211ENST00000443816 GOLGA6DP0CG33 693 aa12.51□□□□□ -0.41
FN1-211ENST00000443816 DPP9Q86TI2 863 aa12.51□□□□□ -0.41
FN1-211ENST00000443816 DBNDD2Q9BQY9 259 aa12.51□□□□□ -0.41
FN1-211ENST00000443816 NUP58Q9BVL2 599 aa12.51□□□□□ -0.41
FN1-211ENST00000443816 GOLGA6AQ9NYA3 693 aa12.51□□□□□ -0.41
FN1-211ENST00000443816 POLR2DO15514 142 aaKnown RBP12.5□□□□□ -0.41
FN1-211ENST00000443816 MXRA7P84157 204 aa12.5□□□□□ -0.41
FN1-211ENST00000443816 NCAPG2Q86XI2 1143 aa12.5□□□□□ -0.41
FN1-211ENST00000443816 POLR3GO15318 223 aaPredicted RBP12.5□□□□□ -0.41
FN1-211ENST00000443816 TESPA1A2RU30 521 aaPredicted RBP12.5□□□□□ -0.41
FN1-211ENST00000443816 GMNNO75496 209 aa12.5□□□□□ -0.41
FN1-211ENST00000443816 TYRO3Q06418 890 aa12.5□□□□□ -0.41
FN1-211ENST00000443816 SUCLG2Q96I99 432 aa12.5□□□□□ -0.41
FN1-211ENST00000443816 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.5□□□□□ -0.411e-323■□□□□ 9.4
FN1-211ENST00000443816 KIF24Q5T7B8 1368 aa12.5□□□□□ -0.41
FN1-211ENST00000443816 OPA1O60313 960 aa12.5□□□□□ -0.41
FN1-211ENST00000443816 KRT19P08727 400 aa12.5□□□□□ -0.41
FN1-211ENST00000443816 SNX29Q8TEQ0 813 aa12.5□□□□□ -0.41
FN1-211ENST00000443816 ATP8A2Q9NTI2 1148 aa12.5□□□□□ -0.41
FN1-211ENST00000443816 LAMC1P11047 1609 aa12.5□□□□□ -0.41
FN1-211ENST00000443816 GIPC1O14908 333 aa12.5□□□□□ -0.41
FN1-211ENST00000443816 GNA14O95837 355 aa12.5□□□□□ -0.41
FN1-211ENST00000443816 ERCC5P28715 1186 aaPredicted RBP12.5□□□□□ -0.41
FN1-211ENST00000443816 DOK7Q18PE1 504 aa12.5□□□□□ -0.41
FN1-211ENST00000443816 DEPTORQ8TB45 409 aa12.5□□□□□ -0.41
FN1-211ENST00000443816 KIAA0232Q92628 1395 aa12.5□□□□□ -0.41
FN1-211ENST00000443816 ATF7P17544 494 aaPredicted RBP12.5□□□□□ -0.41
FN1-211ENST00000443816 EIF4A1P60842 406 aaKnown RBP12.5□□□□□ -0.41
FN1-211ENST00000443816 CTDSPL2Q05D32 466 aa12.5□□□□□ -0.41
FN1-211ENST00000443816 CLUL1Q15846 466 aa12.5□□□□□ -0.41
FN1-211ENST00000443816 ASIC2Q16515 512 aa12.5□□□□□ -0.41
FN1-211ENST00000443816 DALRD3Q5D0E6 543 aaKnown RBP12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms