RNA–Protein interactions for RNA: ENST00000443443.1

VPS50-206, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-206ENST00000443443 BPNT1O95861 308 aa8.02□□□□□ -1.13
VPS50-206ENST00000443443 RANGAP1P46060 587 aaPredicted RBP8.02□□□□□ -1.13
VPS50-206ENST00000443443 RPL6Q02878 288 aaKnown RBP8.02□□□□□ -1.13
VPS50-206ENST00000443443 CAMK2GQ13555 558 aaPredicted RBP8.02□□□□□ -1.13
VPS50-206ENST00000443443 ZNF326Q5BKZ1 582 aaKnown RBP8.02□□□□□ -1.13
VPS50-206ENST00000443443 SFRP5Q5T4F7 317 aa8.02□□□□□ -1.13
VPS50-206ENST00000443443 LETMD1Q6P1Q0 360 aa8.02□□□□□ -1.13
VPS50-206ENST00000443443 CBLL1Q75N03 491 aa8.02□□□□□ -1.13
VPS50-206ENST00000443443 ASB11Q8WXH4 323 aa8.02□□□□□ -1.13
VPS50-206ENST00000443443 TACC3Q9Y6A5 838 aa8.02□□□□□ -1.13
VPS50-206ENST00000443443 ZBTB7CA1YPR0 619 aa8.01□□□□□ -1.13
VPS50-206ENST00000443443 CBX7O95931 251 aa8.01□□□□□ -1.13
VPS50-206ENST00000443443 CST3P01034 146 aaPredicted RBP8.01□□□□□ -1.13
VPS50-206ENST00000443443 PF4P02776 101 aa8.01□□□□□ -1.13
VPS50-206ENST00000443443 FUT4P22083 530 aa8.01□□□□□ -1.13
VPS50-206ENST00000443443 TXKP42681 527 aa8.01□□□□□ -1.13
VPS50-206ENST00000443443 IKZF1Q13422 519 aa8.01□□□□□ -1.13
VPS50-206ENST00000443443 NKPD1Q17RQ9 610 aa8.01□□□□□ -1.13
VPS50-206ENST00000443443 ANGEL2Q5VTE6 544 aaKnown RBP8.01□□□□□ -1.13
VPS50-206ENST00000443443 CDKAL1Q5VV42 579 aa8.01□□□□□ -1.13
VPS50-206ENST00000443443 BNC2Q6ZN30 1099 aaPredicted RBP8.01□□□□□ -1.13
VPS50-206ENST00000443443 CDH24Q86UP0 819 aa8.01□□□□□ -1.13
VPS50-206ENST00000443443 DPH2Q9BQC3 489 aaPredicted RBP8.01□□□□□ -1.13
VPS50-206ENST00000443443 TNKS2Q9H2K2 1166 aa8.01□□□□□ -1.13
VPS50-206ENST00000443443 MAPK8IP1Q9UQF2 711 aa8.01□□□□□ -1.13
VPS50-206ENST00000443443 CAP2P40123 477 aa8□□□□□ -1.13
VPS50-206ENST00000443443 WFDC3Q8IUB2 231 aa8□□□□□ -1.13
VPS50-206ENST00000443443 SPACA3Q8IXA5 215 aa8□□□□□ -1.13
VPS50-206ENST00000443443 GIPC2Q8TF65 315 aa8□□□□□ -1.13
VPS50-206ENST00000443443 RC3H2Q9HBD1 1191 aaKnown RBP8□□□□□ -1.13
VPS50-206ENST00000443443 TJP2Q9UDY2 1190 aa8□□□□□ -1.13
VPS50-206ENST00000443443 CNTNAP4Q9C0A0 1308 aa8□□□□□ -1.13
VPS50-206ENST00000443443 PRR33A8MZF0 331 aa7.99□□□□□ -1.13
VPS50-206ENST00000443443 CYP7A1P22680 504 aa7.99□□□□□ -1.13
VPS50-206ENST00000443443 LMNB2Q03252 620 aa7.99□□□□□ -1.13
VPS50-206ENST00000443443 PWP1Q13610 501 aa7.99□□□□□ -1.13
VPS50-206ENST00000443443 SLC6A19Q695T7 634 aa7.99□□□□□ -1.13
VPS50-206ENST00000443443 ZNF746Q6NUN9 644 aaPredicted RBP7.99□□□□□ -1.13
VPS50-206ENST00000443443 CCDC84Q86UT8 332 aaPredicted RBP7.99□□□□□ -1.13
VPS50-206ENST00000443443 ASIC4Q96FT7 647 aa7.99□□□□□ -1.13
VPS50-206ENST00000443443 TMEM87BQ96K49 555 aa7.99□□□□□ -1.13
VPS50-206ENST00000443443 TMEM74Q96NL1 305 aa7.99□□□□□ -1.13
VPS50-206ENST00000443443 BCL11AQ9H165 835 aa7.99□□□□□ -1.13
VPS50-206ENST00000443443 BTBD11A6QL63 1104 aa7.98□□□□□ -1.13
VPS50-206ENST00000443443 BIN1O00499 593 aa7.98□□□□□ -1.13
VPS50-206ENST00000443443 F13A1P00488 732 aa7.98□□□□□ -1.13
VPS50-206ENST00000443443 PLCG1P19174 1290 aa7.98□□□□□ -1.13
VPS50-206ENST00000443443 ZP2Q05996 745 aa7.98□□□□□ -1.13
VPS50-206ENST00000443443 FAM160A1Q05DH4 1040 aa7.98□□□□□ -1.13
VPS50-206ENST00000443443 SNAP47Q5SQN1 464 aa7.98□□□□□ -1.13
VPS50-206ENST00000443443 MFSD4AQ8N468 514 aa7.98□□□□□ -1.13
VPS50-206ENST00000443443 HSPA12BQ96MM6 686 aa7.98□□□□□ -1.13
VPS50-206ENST00000443443 FMNL2Q96PY5 1086 aa7.98□□□□□ -1.13
VPS50-206ENST00000443443 RSRP1Q9BUV0 290 aa7.98□□□□□ -1.13
VPS50-206ENST00000443443 PRDM7Q9NQW5 492 aa7.98□□□□□ -1.13
VPS50-206ENST00000443443 MBNL3Q9NUK0 354 aaKnown RBP7.98□□□□□ -1.13
VPS50-206ENST00000443443 CORINQ9Y5Q5 1042 aa7.98□□□□□ -1.13
VPS50-206ENST00000443443 RNASE1P07998 156 aaKnown RBP7.97□□□□□ -1.13
VPS50-206ENST00000443443 JUNBP17275 347 aaPredicted RBP7.97□□□□□ -1.13
VPS50-206ENST00000443443 CLCN7P51798 805 aa7.97□□□□□ -1.13
VPS50-206ENST00000443443 MCATQ8IVS2 390 aaKnown RBP7.97□□□□□ -1.13
VPS50-206ENST00000443443 MRPL41Q8IXM3 137 aaKnown RBP7.97□□□□□ -1.13
VPS50-206ENST00000443443 GATAD2BQ8WXI9 593 aa7.97□□□□□ -1.13
VPS50-206ENST00000443443 ADAMTS6Q9UKP5 1117 aa7.97□□□□□ -1.13
VPS50-206ENST00000443443 H3BS24 57 aa7.96□□□□□ -1.14
VPS50-206ENST00000443443 TMCO4Q5TGY1 634 aa7.96□□□□□ -1.14
VPS50-206ENST00000443443 GOLM1Q8NBJ4 401 aa7.96□□□□□ -1.14
VPS50-206ENST00000443443 ACSF2Q96CM8 615 aaPredicted RBP7.96□□□□□ -1.14
VPS50-206ENST00000443443 ADAM30Q9UKF2 790 aa7.96□□□□□ -1.14
VPS50-206ENST00000443443 FAM221AA4D161 298 aa7.95□□□□□ -1.14
VPS50-206ENST00000443443 UPK3BL1B0FP48 263 aa7.95□□□□□ -1.14
VPS50-206ENST00000443443 UPK3BL2E5RIL1 263 aa7.95□□□□□ -1.14
VPS50-206ENST00000443443 CILPO75339 1184 aa7.95□□□□□ -1.14
VPS50-206ENST00000443443 SLC23A3Q6PIS1 610 aa7.95□□□□□ -1.14
VPS50-206ENST00000443443 GRIN3BO60391 1043 aa7.94□□□□□ -1.14
VPS50-206ENST00000443443 ZNF865P0CJ78 1059 aaPredicted RBP7.94□□□□□ -1.14
VPS50-206ENST00000443443 ITGB5P18084 799 aa7.94□□□□□ -1.14
VPS50-206ENST00000443443 ETV3P41162 512 aa7.94□□□□□ -1.14
VPS50-206ENST00000443443 LRRN4CLQ8ND94 238 aa7.94□□□□□ -1.14
VPS50-206ENST00000443443 FAM13CQ8NE31 585 aa7.94□□□□□ -1.14
VPS50-206ENST00000443443 UBE2FQ969M7 185 aa7.94□□□□□ -1.14
VPS50-206ENST00000443443 ATP13A1Q9HD20 1204 aa7.94□□□□□ -1.14
VPS50-206ENST00000443443 COPRSQ9NQ92 184 aa7.94□□□□□ -1.14
VPS50-206ENST00000443443 KBTBD4Q9NVX7 518 aa7.94□□□□□ -1.14
VPS50-206ENST00000443443 ZSWIM5Q9P217 1185 aa7.94□□□□□ -1.14
VPS50-206ENST00000443443 CAPN6Q9Y6Q1 641 aa7.94□□□□□ -1.14
VPS50-206ENST00000443443 PITPNM2Q9BZ72 1349 aa7.94□□□□□ -1.14
VPS50-206ENST00000443443 RBAK-RBAKDNI3L0D1 243 aa7.93□□□□□ -1.14
VPS50-206ENST00000443443 TLR3O15455 904 aaKnown RBP7.93□□□□□ -1.14
VPS50-206ENST00000443443 YARSP54577 528 aaKnown RBP7.93□□□□□ -1.14
VPS50-206ENST00000443443 ATG4DQ86TL0 474 aaPredicted RBP7.93□□□□□ -1.14
VPS50-206ENST00000443443 RHOVQ96L33 236 aa7.93□□□□□ -1.14
VPS50-206ENST00000443443 CARS2Q9HA77 564 aaKnown RBP7.93□□□□□ -1.14
VPS50-206ENST00000443443 SEMA3GQ9NS98 782 aa7.93□□□□□ -1.14
VPS50-206ENST00000443443 KLHL3Q9UH77 587 aa7.93□□□□□ -1.14
VPS50-206ENST00000443443 CEP131Q9UPN4 1083 aa7.93□□□□□ -1.14
VPS50-206ENST00000443443 KRTAP4-8A0A0G2JLE6 195 aa7.92□□□□□ -1.14
VPS50-206ENST00000443443 PAPLNO95428 1278 aa7.92□□□□□ -1.14
VPS50-206ENST00000443443 KIR3DL1P43629 444 aa7.92□□□□□ -1.14
VPS50-206ENST00000443443 TNNI2P48788 182 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms