RNA–Protein interactions for RNA: ENST00000442942.6

UBXN11-210, Transcript of UBX domain protein 11, humanhuman

TSL 2

Gene UBXN11, Length 688 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-210ENST00000442942 TRIM6-TRIM34B2RNG4 842 aa16.4■□□□□ 0.22
UBXN11-210ENST00000442942 USP17L12C9JPN9 530 aa16.4■□□□□ 0.22
UBXN11-210ENST00000442942 USP17L21D6R901 530 aa16.4■□□□□ 0.22
UBXN11-210ENST00000442942 GNAT2P19087 354 aa16.4■□□□□ 0.22
UBXN11-210ENST00000442942 SHMT1P34896 483 aa16.4■□□□□ 0.22
UBXN11-210ENST00000442942 CRHR2Q13324 411 aa16.4■□□□□ 0.22
UBXN11-210ENST00000442942 NOM1Q5C9Z4 860 aaKnown RBP16.4■□□□□ 0.22
UBXN11-210ENST00000442942 C12orf60Q5U649 245 aa16.4■□□□□ 0.22
UBXN11-210ENST00000442942 GIMAP6Q6P9H5 292 aa16.4■□□□□ 0.22
UBXN11-210ENST00000442942 PRRT2Q7Z6L0 340 aaPredicted RBP16.4■□□□□ 0.22
UBXN11-210ENST00000442942 RILPL2Q969X0 211 aa16.4■□□□□ 0.22
UBXN11-210ENST00000442942 TBC1D2Q9BYX2 928 aa16.4■□□□□ 0.22
UBXN11-210ENST00000442942 ZCCHC17Q9NP64 241 aaKnown RBP16.4■□□□□ 0.22
UBXN11-210ENST00000442942 ZBTB21Q9ULJ3 1066 aa16.4■□□□□ 0.22
UBXN11-210ENST00000442942 CYP2D7A0A087X1C5 515 aa16.39■□□□□ 0.21
UBXN11-210ENST00000442942 SMIM22K7EJ46 135 aa16.39■□□□□ 0.21
UBXN11-210ENST00000442942 GPR25O00155 361 aa16.39■□□□□ 0.21
UBXN11-210ENST00000442942 TAF1CQ15572 869 aaPredicted RBP16.39■□□□□ 0.21
UBXN11-210ENST00000442942 CERKLQ49MI3 558 aaPredicted RBP16.39■□□□□ 0.21
UBXN11-210ENST00000442942 CTR9Q6PD62 1173 aa16.39■□□□□ 0.21
UBXN11-210ENST00000442942 AMOTL1Q8IY63 956 aa16.39■□□□□ 0.21
UBXN11-210ENST00000442942 ZNF280CQ8ND82 737 aa16.39■□□□□ 0.21
UBXN11-210ENST00000442942 EPB41L4AQ9HCS5 686 aaPredicted RBP16.39■□□□□ 0.21
UBXN11-210ENST00000442942 ARPP21Q9UBL0 812 aaPredicted RBP16.39■□□□□ 0.21
UBXN11-210ENST00000442942 TAOK2Q9UL54 1235 aa16.39■□□□□ 0.21
UBXN11-210ENST00000442942 PATL2C9JE40 543 aaKnown RBP16.38■□□□□ 0.21
UBXN11-210ENST00000442942 GH2P01242 217 aa16.38■□□□□ 0.21
UBXN11-210ENST00000442942 SPP2Q13103 211 aa16.38■□□□□ 0.21
UBXN11-210ENST00000442942 SBK1Q52WX2 424 aa16.38■□□□□ 0.21
UBXN11-210ENST00000442942 CCDC129Q6ZRS4 1044 aa16.38■□□□□ 0.21
UBXN11-210ENST00000442942 ANKRD23Q86SG2 305 aa16.38■□□□□ 0.21
UBXN11-210ENST00000442942 SLC44A5Q8NCS7 719 aa16.38■□□□□ 0.21
UBXN11-210ENST00000442942 ZNF296Q8WUU4 475 aaPredicted RBP16.38■□□□□ 0.21
UBXN11-210ENST00000442942 DYNLL2Q96FJ2 89 aa16.38■□□□□ 0.21
UBXN11-210ENST00000442942 WDR18Q9BV38 432 aa16.38■□□□□ 0.21
UBXN11-210ENST00000442942 AS3MTQ9HBK9 375 aa16.38■□□□□ 0.21
UBXN11-210ENST00000442942 SWAP70Q9UH65 585 aa16.38■□□□□ 0.21
UBXN11-210ENST00000442942 A0A0D9SFI3 127 aa16.37■□□□□ 0.21
UBXN11-210ENST00000442942 ABCB5Q2M3G0 1257 aa16.37■□□□□ 0.21
UBXN11-210ENST00000442942 GPAT2Q6NUI2 795 aa16.37■□□□□ 0.21
UBXN11-210ENST00000442942 FASTKD5Q7L8L6 764 aaKnown RBP16.37■□□□□ 0.21
UBXN11-210ENST00000442942 FAM227BQ96M60 508 aa16.37■□□□□ 0.21
UBXN11-210ENST00000442942 HELLSQ9NRZ9 838 aa16.37■□□□□ 0.21
UBXN11-210ENST00000442942 HTTP42858 3142 aa16.36■□□□□ 0.21
UBXN11-210ENST00000442942 PDHXO00330 501 aa16.36■□□□□ 0.21
UBXN11-210ENST00000442942 APPP05067 770 aa16.36■□□□□ 0.21
UBXN11-210ENST00000442942 TDO2P48775 406 aa16.36■□□□□ 0.21
UBXN11-210ENST00000442942 TTC22Q5TAA0 569 aa16.36■□□□□ 0.21
UBXN11-210ENST00000442942 GADL1Q6ZQY3 521 aa16.36■□□□□ 0.21
UBXN11-210ENST00000442942 C16orf86Q6ZW13 317 aa16.36■□□□□ 0.21
UBXN11-210ENST00000442942 CENPQQ7L2Z9 268 aaPredicted RBP16.36■□□□□ 0.21
UBXN11-210ENST00000442942 IFNL3Q8IZI9 196 aa16.36■□□□□ 0.21
UBXN11-210ENST00000442942 ZFYVE28Q9HCC9 887 aa16.36■□□□□ 0.21
UBXN11-210ENST00000442942 GREB1LQ9C091 1923 aaPredicted RBP16.36■□□□□ 0.21
UBXN11-210ENST00000442942 CENPFP49454 3210 aa16.36■□□□□ 0.21
UBXN11-210ENST00000442942 ROBO3Q96MS0 1386 aa16.36■□□□□ 0.21
UBXN11-210ENST00000442942 FOXP2O15409 715 aa16.35■□□□□ 0.21
UBXN11-210ENST00000442942 FKTNO75072 461 aa16.35■□□□□ 0.21
UBXN11-210ENST00000442942 CENPBP07199 599 aaPredicted RBP16.35■□□□□ 0.21
UBXN11-210ENST00000442942 GSPT1P15170 499 aaKnown RBP16.35■□□□□ 0.21
UBXN11-210ENST00000442942 SDSP20132 328 aa16.35■□□□□ 0.21
UBXN11-210ENST00000442942 GUCY1A2P33402 732 aa16.35■□□□□ 0.21
UBXN11-210ENST00000442942 CDK8P49336 464 aa16.35■□□□□ 0.21
UBXN11-210ENST00000442942 HMGCS2P54868 508 aa16.35■□□□□ 0.21
UBXN11-210ENST00000442942 NMIQ13287 307 aaPredicted RBP16.35■□□□□ 0.21
UBXN11-210ENST00000442942 MCMDC2Q4G0Z9 681 aa16.35■□□□□ 0.21
UBXN11-210ENST00000442942 SH3D19Q5HYK7 790 aa16.35■□□□□ 0.21
UBXN11-210ENST00000442942 TNS4Q8IZW8 715 aa16.35■□□□□ 0.21
UBXN11-210ENST00000442942 PROCA1Q8NCQ7 364 aaPredicted RBP16.35■□□□□ 0.21
UBXN11-210ENST00000442942 NACAP1Q9BZK3 213 aa16.35■□□□□ 0.21
UBXN11-210ENST00000442942 CABP5Q9NP86 173 aa16.35■□□□□ 0.21
UBXN11-210ENST00000442942 DOCK3Q8IZD9 2030 aa16.35■□□□□ 0.21
UBXN11-210ENST00000442942 MGAMO43451 1857 aa16.34■□□□□ 0.21
UBXN11-210ENST00000442942 MINDY4BA8MYZ0 360 aa16.34■□□□□ 0.21
UBXN11-210ENST00000442942 TLR2O60603 784 aa16.34■□□□□ 0.21
UBXN11-210ENST00000442942 NEFLP07196 543 aa16.34■□□□□ 0.21
UBXN11-210ENST00000442942 BACE1P56817 501 aa16.34■□□□□ 0.21
UBXN11-210ENST00000442942 MTMR2Q13614 643 aa16.34■□□□□ 0.21
UBXN11-210ENST00000442942 RAB3GAP1Q15042 981 aa16.34■□□□□ 0.21
UBXN11-210ENST00000442942 AGTPBP1Q9UPW5 1226 aa16.34■□□□□ 0.21
UBXN11-210ENST00000442942 SLC45A1Q9Y2W3 748 aa16.34■□□□□ 0.21
UBXN11-210ENST00000442942 MYH4Q9Y623 1939 aa16.34■□□□□ 0.21
UBXN11-210ENST00000442942 ZSWIM8A7E2V4 1837 aa16.33■□□□□ 0.21
UBXN11-210ENST00000442942 C19orf81C9J6K1 198 aa16.33■□□□□ 0.2
UBXN11-210ENST00000442942 USP17L10C9JJH3 530 aa16.33■□□□□ 0.2
UBXN11-210ENST00000442942 MPHOSPH10O00566 681 aaKnown RBP16.33■□□□□ 0.2
UBXN11-210ENST00000442942 AKR1B1P15121 316 aa16.33■□□□□ 0.2
UBXN11-210ENST00000442942 DGKZQ13574 1117 aa16.33■□□□□ 0.2
UBXN11-210ENST00000442942 SEPT2Q15019 361 aa16.33■□□□□ 0.2
UBXN11-210ENST00000442942 TREML2Q5T2D2 321 aa16.33■□□□□ 0.2
UBXN11-210ENST00000442942 VPS53Q5VIR6 699 aa16.33■□□□□ 0.2
UBXN11-210ENST00000442942 ZNF589Q86UQ0 364 aaPredicted RBP16.33■□□□□ 0.2
UBXN11-210ENST00000442942 CCDC17Q96LX7 622 aa16.33■□□□□ 0.2
UBXN11-210ENST00000442942 NAPBQ9H115 298 aa16.33■□□□□ 0.2
UBXN11-210ENST00000442942 ADGRA2Q96PE1 1338 aa16.33■□□□□ 0.2
UBXN11-210ENST00000442942 HIP1O00291 1037 aa16.32■□□□□ 0.2
UBXN11-210ENST00000442942 SP3Q02447 781 aa16.32■□□□□ 0.2
UBXN11-210ENST00000442942 CCDC171Q6TFL3 1326 aa16.32■□□□□ 0.2
UBXN11-210ENST00000442942 TMEM179Q6ZVK1 233 aa16.32■□□□□ 0.2
UBXN11-210ENST00000442942 PARK7Q99497 189 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms