RNA–Protein interactions for RNA: ENST00000442691.6

NR1I3-211, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best) BASIC

Gene NR1I3, Length 1,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-211ENST00000442691 GTF3C6Q969F1 213 aa10.68□□□□□ -0.7
NR1I3-211ENST00000442691 MCM9Q9NXL9 1143 aa10.68□□□□□ -0.7
NR1I3-211ENST00000442691 HDAC9Q9UKV0 1011 aa10.68□□□□□ -0.7
NR1I3-211ENST00000442691 TPCN1Q9ULQ1 816 aa10.68□□□□□ -0.7
NR1I3-211ENST00000442691 JAG2Q9Y219 1238 aa10.68□□□□□ -0.7
NR1I3-211ENST00000442691 NAV1Q8NEY1 1877 aa10.68□□□□□ -0.7
NR1I3-211ENST00000442691 NEDD4P46934 1319 aa10.67□□□□□ -0.7
NR1I3-211ENST00000442691 ERICH2A1L162 156 aa10.67□□□□□ -0.7
NR1I3-211ENST00000442691 SH2B2O14492 632 aaPredicted RBP10.67□□□□□ -0.7
NR1I3-211ENST00000442691 CPA1P15085 419 aa10.67□□□□□ -0.7
NR1I3-211ENST00000442691 HMGN5P82970 282 aaKnown RBP10.67□□□□□ -0.7
NR1I3-211ENST00000442691 ME3Q16798 604 aa10.67□□□□□ -0.7
NR1I3-211ENST00000442691 PPP4R3BQ5MIZ7 849 aa10.67□□□□□ -0.7
NR1I3-211ENST00000442691 APOBEC3HQ6NTF7 200 aaKnown RBP10.67□□□□□ -0.7
NR1I3-211ENST00000442691 TTC6Q86TZ1 520 aa10.67□□□□□ -0.7
NR1I3-211ENST00000442691 IQCA1Q86XH1 822 aa10.67□□□□□ -0.7
NR1I3-211ENST00000442691 OGFOD1Q8N543 542 aa10.67□□□□□ -0.7
NR1I3-211ENST00000442691 FBXW7Q969H0 707 aa10.67□□□□□ -0.7
NR1I3-211ENST00000442691 EHD4Q9H223 541 aa10.67□□□□□ -0.7
NR1I3-211ENST00000442691 DHX36Q9H2U1 1008 aaKnown RBP10.67□□□□□ -0.7
NR1I3-211ENST00000442691 ZNF277Q9NRM2 450 aaPredicted RBP10.67□□□□□ -0.7
NR1I3-211ENST00000442691 TCP11L1Q9NUJ3 509 aa10.67□□□□□ -0.7
NR1I3-211ENST00000442691 SWAP70Q9UH65 585 aa10.67□□□□□ -0.7
NR1I3-211ENST00000442691 SCN9AQ15858 1988 aa10.66□□□□□ -0.7
NR1I3-211ENST00000442691 COL4A5P29400 1685 aa10.66□□□□□ -0.7
NR1I3-211ENST00000442691 ATRNL1Q5VV63 1379 aa10.66□□□□□ -0.7
NR1I3-211ENST00000442691 PLIN4Q96Q06 1357 aa10.66□□□□□ -0.7
NR1I3-211ENST00000442691 KDM4AO75164 1064 aa10.66□□□□□ -0.7
NR1I3-211ENST00000442691 ENTPD3O75355 529 aa10.66□□□□□ -0.7
NR1I3-211ENST00000442691 RAB3GAP1Q15042 981 aa10.66□□□□□ -0.7
NR1I3-211ENST00000442691 C16orf86Q6ZW13 317 aa10.66□□□□□ -0.7
NR1I3-211ENST00000442691 IGDCC4Q8TDY8 1250 aa10.66□□□□□ -0.7
NR1I3-211ENST00000442691 TGFBRAP1Q8WUH2 860 aa10.66□□□□□ -0.7
NR1I3-211ENST00000442691 DPF2Q92785 391 aa10.66□□□□□ -0.7
NR1I3-211ENST00000442691 UBAC1Q9BSL1 405 aa10.66□□□□□ -0.7
NR1I3-211ENST00000442691 SLKQ9H2G2 1235 aaPredicted RBP10.66□□□□□ -0.7
NR1I3-211ENST00000442691 ZSWIM5Q9P217 1185 aa10.66□□□□□ -0.7
NR1I3-211ENST00000442691 SMC3Q9UQE7 1217 aa10.66□□□□□ -0.7
NR1I3-211ENST00000442691 BCS1LQ9Y276 419 aa10.66□□□□□ -0.7
NR1I3-211ENST00000442691 WDR33Q9C0J8 1336 aaKnown RBP10.65□□□□□ -0.7
NR1I3-211ENST00000442691 CCDC196A0A1B0GTZ2 297 aa10.65□□□□□ -0.7
NR1I3-211ENST00000442691 MINDY4BA8MYZ0 360 aa10.65□□□□□ -0.7
NR1I3-211ENST00000442691 B4E1Z4 1266 aa10.65□□□□□ -0.7
NR1I3-211ENST00000442691 FZD9O00144 591 aa10.65□□□□□ -0.7
NR1I3-211ENST00000442691 PSMD14O00487 310 aa10.65□□□□□ -0.7
NR1I3-211ENST00000442691 WDHD1O75717 1129 aaPredicted RBP10.65□□□□□ -0.7
NR1I3-211ENST00000442691 CDKL5O76039 1030 aa10.65□□□□□ -0.7
NR1I3-211ENST00000442691 HLA-DOAP06340 250 aa10.65□□□□□ -0.7
NR1I3-211ENST00000442691 CALM1P0DP23 149 aa10.65□□□□□ -0.7
NR1I3-211ENST00000442691 CALM2P0DP24 149 aa10.65□□□□□ -0.7
NR1I3-211ENST00000442691 CALM3P0DP25 149 aa10.65□□□□□ -0.7
NR1I3-211ENST00000442691 PTMSP20962 102 aa10.65□□□□□ -0.7
NR1I3-211ENST00000442691 PDIA3P30101 505 aaKnown RBP10.65□□□□□ -0.7
NR1I3-211ENST00000442691 CTDSPL2Q05D32 466 aa10.65□□□□□ -0.7
NR1I3-211ENST00000442691 TMEM67Q5HYA8 995 aa10.65□□□□□ -0.7
NR1I3-211ENST00000442691 CIAPIN1Q6FI81 312 aa10.65□□□□□ -0.7
NR1I3-211ENST00000442691 CDC42EP5Q6NZY7 148 aa10.65□□□□□ -0.7
NR1I3-211ENST00000442691 CPLX2Q6PUV4 134 aaKnown RBP10.65□□□□□ -0.7
NR1I3-211ENST00000442691 APOA5Q6Q788 366 aa10.65□□□□□ -0.7
NR1I3-211ENST00000442691 MAP3K14Q99558 947 aa10.65□□□□□ -0.7
NR1I3-211ENST00000442691 LY9Q9HBG7 655 aa10.65□□□□□ -0.7
NR1I3-211ENST00000442691 PPP1R1BQ9UD71 204 aaPredicted RBP10.65□□□□□ -0.7
NR1I3-211ENST00000442691 CDK5RAP2Q96SN8 1893 aa10.64□□□□□ -0.71
NR1I3-211ENST00000442691 IFIT3O14879 490 aaKnown RBP10.64□□□□□ -0.71
NR1I3-211ENST00000442691 LARGE1O95461 756 aa10.64□□□□□ -0.71
NR1I3-211ENST00000442691 GABPAQ06546 454 aa10.64□□□□□ -0.71
NR1I3-211ENST00000442691 WTAPQ15007 396 aa10.64□□□□□ -0.71
NR1I3-211ENST00000442691 SEC23AQ15436 765 aa10.64□□□□□ -0.71
NR1I3-211ENST00000442691 SYNE3Q6ZMZ3 975 aa10.64□□□□□ -0.71
NR1I3-211ENST00000442691 CYB5R4Q7L1T6 521 aa10.64□□□□□ -0.71
NR1I3-211ENST00000442691 METTL16Q86W50 562 aaKnown RBP10.64□□□□□ -0.71
NR1I3-211ENST00000442691 DGKHQ86XP1 1220 aa10.64□□□□□ -0.71
NR1I3-211ENST00000442691 KIAA0825Q8IV33 1275 aa10.64□□□□□ -0.71
NR1I3-211ENST00000442691 CCDC83Q8IWF9 413 aa10.64□□□□□ -0.71
NR1I3-211ENST00000442691 SMARCC2Q8TAQ2 1214 aa10.64□□□□□ -0.71
NR1I3-211ENST00000442691 ANKS1AQ92625 1134 aa10.64□□□□□ -0.71
NR1I3-211ENST00000442691 OSBPL5Q9H0X9 879 aaPredicted RBP10.64□□□□□ -0.71
NR1I3-211ENST00000442691 USP40Q9NVE5 1235 aa10.64□□□□□ -0.71
NR1I3-211ENST00000442691 TMOD2Q9NZR1 351 aa10.64□□□□□ -0.71
NR1I3-211ENST00000442691 PCDHGA4Q9Y5G9 962 aa10.64□□□□□ -0.71
NR1I3-211ENST00000442691 ECM29Q5VYK3 1845 aa10.63□□□□□ -0.71
NR1I3-211ENST00000442691 ZC3H4Q9UPT8 1303 aaKnown RBP10.63□□□□□ -0.71
NR1I3-211ENST00000442691 KLF18A0A0U1RQI7 1052 aa10.63□□□□□ -0.71
NR1I3-211ENST00000442691 CCDC69A6NI79 296 aa10.63□□□□□ -0.71
NR1I3-211ENST00000442691 GOLGA8BA8MQT2 603 aa10.63□□□□□ -0.71
NR1I3-211ENST00000442691 DDAH1O94760 285 aa10.63□□□□□ -0.71
NR1I3-211ENST00000442691 POLR3DP05423 398 aaPredicted RBP10.63□□□□□ -0.71
NR1I3-211ENST00000442691 USP17L8P0C7I0 530 aa10.63□□□□□ -0.71
NR1I3-211ENST00000442691 LMNB1P20700 586 aa10.63□□□□□ -0.71
NR1I3-211ENST00000442691 NOVP48745 357 aa10.63□□□□□ -0.71
NR1I3-211ENST00000442691 SCNN1DP51172 638 aa10.63□□□□□ -0.71
NR1I3-211ENST00000442691 EIF6P56537 245 aaKnown RBP10.63□□□□□ -0.71
NR1I3-211ENST00000442691 ZNF280AP59817 542 aaPredicted RBP10.63□□□□□ -0.71
NR1I3-211ENST00000442691 CXCL9Q07325 125 aa10.63□□□□□ -0.71
NR1I3-211ENST00000442691 APOBRQ0VD83 1088 aa10.63□□□□□ -0.71
NR1I3-211ENST00000442691 ST3GAL1Q11201 340 aa10.63□□□□□ -0.71
NR1I3-211ENST00000442691 COL9A3Q14050 684 aaPredicted RBP10.63□□□□□ -0.71
NR1I3-211ENST00000442691 TMEM132AQ24JP5 1023 aa10.63□□□□□ -0.71
NR1I3-211ENST00000442691 MAPKAPK5Q8IW41 473 aa10.63□□□□□ -0.71
NR1I3-211ENST00000442691 NLGN2Q8NFZ4 835 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms