RNA–Protein interactions for RNA: ENST00000442232.1

TTC28-203, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-203ENST00000442232 IFIT2P09913 472 aaKnown RBP14.31□□□□□ -0.12
TTC28-203ENST00000442232 FLT3LGP49771 235 aa14.31□□□□□ -0.12
TTC28-203ENST00000442232 BACE1P56817 501 aa14.31□□□□□ -0.12
TTC28-203ENST00000442232 RPAP2Q8IXW5 612 aaPredicted RBP14.31□□□□□ -0.12
TTC28-203ENST00000442232 RHPN1Q8TCX5 695 aa14.31□□□□□ -0.12
TTC28-203ENST00000442232 KIF1BPQ96EK5 621 aa14.31□□□□□ -0.12
TTC28-203ENST00000442232 BCL11AQ9H165 835 aa14.31□□□□□ -0.12
TTC28-203ENST00000442232 ASCC2Q9H1I8 757 aaPredicted RBP14.31□□□□□ -0.12
TTC28-203ENST00000442232 IL1RAPL2Q9NP60 686 aa14.31□□□□□ -0.12
TTC28-203ENST00000442232 ZBTB21Q9ULJ3 1066 aa14.31□□□□□ -0.12
TTC28-203ENST00000442232 DOCK3Q8IZD9 2030 aa14.31□□□□□ -0.12
TTC28-203ENST00000442232 USP17L10C9JJH3 530 aa14.3□□□□□ -0.12
TTC28-203ENST00000442232 IRF5Q13568 498 aa14.3□□□□□ -0.12
TTC28-203ENST00000442232 RRP1BQ14684 758 aaKnown RBP14.3□□□□□ -0.12
TTC28-203ENST00000442232 TTC6Q86TZ1 520 aa14.3□□□□□ -0.12
TTC28-203ENST00000442232 PXYLP1Q8TE99 480 aa14.3□□□□□ -0.12
TTC28-203ENST00000442232 FEZ1Q99689 392 aa14.3□□□□□ -0.12
TTC28-203ENST00000442232 COG6Q9Y2V7 657 aa14.3□□□□□ -0.12
TTC28-203ENST00000442232 NDUFB9Q9Y6M9 179 aa14.3□□□□□ -0.12
TTC28-203ENST00000442232 MYH8P13535 1937 aa14.29□□□□□ -0.12
TTC28-203ENST00000442232 MAGEB6P1A0A0J9YX57 407 aa14.29□□□□□ -0.12
TTC28-203ENST00000442232 RAB11FIP3O75154 756 aa14.29□□□□□ -0.12
TTC28-203ENST00000442232 INHAP05111 366 aa14.29□□□□□ -0.12
TTC28-203ENST00000442232 ELNP15502 786 aa14.29□□□□□ -0.12
TTC28-203ENST00000442232 GJA8P48165 433 aa14.29□□□□□ -0.12
TTC28-203ENST00000442232 METTL16Q86W50 562 aaKnown RBP14.29□□□□□ -0.12
TTC28-203ENST00000442232 CCAR1Q8IX12 1150 aaKnown RBP14.29□□□□□ -0.12
TTC28-203ENST00000442232 GTF3C2Q8WUA4 911 aaPredicted RBP14.29□□□□□ -0.12
TTC28-203ENST00000442232 DNAJC2Q99543 621 aaKnown RBP14.29□□□□□ -0.12
TTC28-203ENST00000442232 HTATIP2Q9BUP3 242 aa14.29□□□□□ -0.12
TTC28-203ENST00000442232 CRNKL1Q9BZJ0 848 aaKnown RBP14.29□□□□□ -0.12
TTC28-203ENST00000442232 DNAJC18Q9H819 358 aa14.29□□□□□ -0.12
TTC28-203ENST00000442232 SERPINB13Q9UIV8 391 aa14.29□□□□□ -0.12
TTC28-203ENST00000442232 CAPN2P17655 700 aa14.28□□□□□ -0.12
TTC28-203ENST00000442232 DDX60LQ5H9U9 1706 aaKnown RBP14.28□□□□□ -0.12
TTC28-203ENST00000442232 USP17L2Q6R6M4 530 aa14.28□□□□□ -0.12
TTC28-203ENST00000442232 U2AF1L4Q8WU68 220 aaKnown RBP14.28□□□□□ -0.12
TTC28-203ENST00000442232 DPF3Q92784 378 aa14.28□□□□□ -0.12
TTC28-203ENST00000442232 SHISA4Q96DD7 197 aa14.28□□□□□ -0.12
TTC28-203ENST00000442232 UNC93B1Q9H1C4 597 aa14.28□□□□□ -0.12
TTC28-203ENST00000442232 EHD4Q9H223 541 aa14.28□□□□□ -0.12
TTC28-203ENST00000442232 ANTXR1Q9H6X2 564 aa14.28□□□□□ -0.12
TTC28-203ENST00000442232 CWC22Q9HCG8 908 aaKnown RBP14.28□□□□□ -0.12
TTC28-203ENST00000442232 CABP5Q9NP86 173 aa14.28□□□□□ -0.12
TTC28-203ENST00000442232 RCAN3Q9UKA8 241 aa14.28□□□□□ -0.12
TTC28-203ENST00000442232 MYH7P12883 1935 aa14.27□□□□□ -0.12
TTC28-203ENST00000442232 GOLIM4O00461 696 aa14.27□□□□□ -0.13
TTC28-203ENST00000442232 FARP2O94887 1054 aaPredicted RBP14.27□□□□□ -0.13
TTC28-203ENST00000442232 GH2P01242 217 aa14.27□□□□□ -0.13
TTC28-203ENST00000442232 POLR3DP05423 398 aaPredicted RBP14.27□□□□□ -0.13
TTC28-203ENST00000442232 HOXA7P31268 230 aaPredicted RBP14.27□□□□□ -0.13
TTC28-203ENST00000442232 PDE3AQ14432 1141 aa14.27□□□□□ -0.13
TTC28-203ENST00000442232 RAB3GAP1Q15042 981 aa14.27□□□□□ -0.13
TTC28-203ENST00000442232 SLC9C2Q5TAH2 1124 aa14.27□□□□□ -0.13
TTC28-203ENST00000442232 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.27□□□□□ -0.13
TTC28-203ENST00000442232 BRCA2P51587 3418 aa14.27□□□□□ -0.13
TTC28-203ENST00000442232 TFRCP02786 760 aaKnown RBP14.26□□□□□ -0.13
TTC28-203ENST00000442232 HMGCRP04035 888 aa14.26□□□□□ -0.13
TTC28-203ENST00000442232 PDE6AP16499 860 aa14.26□□□□□ -0.13
TTC28-203ENST00000442232 USP14P54578 494 aa14.26□□□□□ -0.13
TTC28-203ENST00000442232 HERVK_113P62684 666 aa14.26□□□□□ -0.13
TTC28-203ENST00000442232 ABCB5Q2M3G0 1257 aa14.26□□□□□ -0.13
TTC28-203ENST00000442232 CERKLQ49MI3 558 aaPredicted RBP14.26□□□□□ -0.13
TTC28-203ENST00000442232 HABP4Q5JVS0 413 aaKnown RBP14.26□□□□□ -0.13
TTC28-203ENST00000442232 GPRC5AQ8NFJ5 357 aa14.26□□□□□ -0.13
TTC28-203ENST00000442232 ZBTB40Q9NUA8 1239 aa14.26□□□□□ -0.13
TTC28-203ENST00000442232 MORF4L1Q9UBU8 362 aa14.26□□□□□ -0.13
TTC28-203ENST00000442232 CEP290O15078 2479 aa14.26□□□□□ -0.13
TTC28-203ENST00000442232 MKI67P46013 3256 aaKnown RBP14.26□□□□□ -0.13
TTC28-203ENST00000442232 SGPL1O95470 568 aa14.25□□□□□ -0.13
TTC28-203ENST00000442232 ZYXQ15942 572 aaKnown RBP14.25□□□□□ -0.13
TTC28-203ENST00000442232 SHROOM1Q2M3G4 852 aaPredicted RBP14.25□□□□□ -0.13
TTC28-203ENST00000442232 TATDN1Q6P1N9 297 aa14.25□□□□□ -0.13
TTC28-203ENST00000442232 SOCS4Q8WXH5 440 aa14.25□□□□□ -0.13
TTC28-203ENST00000442232 P2RX7Q99572 595 aaKnown RBP14.25□□□□□ -0.13
TTC28-203ENST00000442232 PAGR1Q9BTK6 254 aa14.25□□□□□ -0.13
TTC28-203ENST00000442232 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.25□□□□□ -0.13
TTC28-203ENST00000442232 PCDH10Q9P2E7 1040 aa14.25□□□□□ -0.13
TTC28-203ENST00000442232 ZNF532Q9HCE3 1301 aa14.24□□□□□ -0.13
TTC28-203ENST00000442232 MAPK4P31152 587 aa14.24□□□□□ -0.13
TTC28-203ENST00000442232 JAG1P78504 1218 aa14.24□□□□□ -0.13
TTC28-203ENST00000442232 AMOTL1Q8IY63 956 aa14.24□□□□□ -0.13
TTC28-203ENST00000442232 DDRGK1Q96HY6 314 aa14.24□□□□□ -0.13
TTC28-203ENST00000442232 DEFB118Q96PH6 123 aa14.24□□□□□ -0.13
TTC28-203ENST00000442232 NUDT12Q9BQG2 462 aa14.24□□□□□ -0.13
TTC28-203ENST00000442232 RIOK1Q9BRS2 568 aaKnown RBP14.24□□□□□ -0.13
TTC28-203ENST00000442232 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.24□□□□□ -0.13
TTC28-203ENST00000442232 PAG1Q9NWQ8 432 aa14.24□□□□□ -0.13
TTC28-203ENST00000442232 MCM9Q9NXL9 1143 aa14.24□□□□□ -0.13
TTC28-203ENST00000442232 NR2E3Q9Y5X4 410 aa14.24□□□□□ -0.13
TTC28-203ENST00000442232 PLXNB2O15031 1838 aa14.23□□□□□ -0.13
TTC28-203ENST00000442232 USP17L15C9J2P7 530 aa14.23□□□□□ -0.13
TTC28-203ENST00000442232 USP17L13C9JLJ4 530 aa14.23□□□□□ -0.13
TTC28-203ENST00000442232 USP17L11C9JVI0 530 aa14.23□□□□□ -0.13
TTC28-203ENST00000442232 USP17L18D6R9N7 530 aa14.23□□□□□ -0.13
TTC28-203ENST00000442232 USP17L22D6RA61 530 aa14.23□□□□□ -0.13
TTC28-203ENST00000442232 USP17L17D6RBQ6 530 aa14.23□□□□□ -0.13
TTC28-203ENST00000442232 USP17L19D6RCP7 530 aa14.23□□□□□ -0.13
TTC28-203ENST00000442232 USP17L20D6RJB6 530 aa14.23□□□□□ -0.13
TTC28-203ENST00000442232 H0YGN5 161 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms