RNA–Protein interactions for RNA: ENST00000441728.6

UBE2F-215, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-215ENST00000441728 PRO3102Q9H379 93 aa24.4■■□□□ 1.5
UBE2F-215ENST00000441728 SAP30BPQ9UHR5 308 aaKnown RBP24.4■■□□□ 1.5
UBE2F-215ENST00000441728 CCER2I3L3R5 266 aa24.39■■□□□ 1.49
UBE2F-215ENST00000441728 BCAR3O75815 825 aa24.39■■□□□ 1.49
UBE2F-215ENST00000441728 MAPK4P31152 587 aa24.39■■□□□ 1.49
UBE2F-215ENST00000441728 PPP4CP60510 307 aa24.39■■□□□ 1.49
UBE2F-215ENST00000441728 HERVK_113P62684 666 aa24.39■■□□□ 1.49
UBE2F-215ENST00000441728 ZKSCAN2Q63HK3 967 aa24.39■■□□□ 1.49
UBE2F-215ENST00000441728 TRMT44Q8IYL2 757 aaKnown RBP24.39■■□□□ 1.49
UBE2F-215ENST00000441728 P2RX7Q99572 595 aaKnown RBP24.39■■□□□ 1.49
UBE2F-215ENST00000441728 C11orf49Q9H6J7 331 aa24.39■■□□□ 1.49
UBE2F-215ENST00000441728 GJD2Q9UKL4 321 aa24.39■■□□□ 1.49
UBE2F-215ENST00000441728 PALD1Q9ULE6 856 aa24.39■■□□□ 1.49
UBE2F-215ENST00000441728 IGSF3O75054 1194 aa24.38■■□□□ 1.49
UBE2F-215ENST00000441728 ZKSCAN1P17029 563 aaPredicted RBP24.38■■□□□ 1.49
UBE2F-215ENST00000441728 HOXA7P31268 230 aaPredicted RBP24.38■■□□□ 1.49
UBE2F-215ENST00000441728 FTSJ3Q8IY81 847 aaKnown RBP24.38■■□□□ 1.49
UBE2F-215ENST00000441728 FEZ1Q99689 392 aa24.38■■□□□ 1.49
UBE2F-215ENST00000441728 PAGR1Q9BTK6 254 aa24.38■■□□□ 1.49
UBE2F-215ENST00000441728 ZBTB21Q9ULJ3 1066 aa24.38■■□□□ 1.49
UBE2F-215ENST00000441728 TNNQ9UQP3 1299 aa24.38■■□□□ 1.49
UBE2F-215ENST00000441728 PRKAR2AP13861 404 aaKnown RBP24.37■■□□□ 1.49
UBE2F-215ENST00000441728 USP5P45974 858 aa24.37■■□□□ 1.49
UBE2F-215ENST00000441728 TRIM32Q13049 653 aa24.37■■□□□ 1.49
UBE2F-215ENST00000441728 TMEM57Q8N5G2 664 aa24.37■■□□□ 1.49
UBE2F-215ENST00000441728 TRIB2Q92519 343 aa24.37■■□□□ 1.49
UBE2F-215ENST00000441728 ZMYND8Q9ULU4 1186 aaPredicted RBP24.37■■□□□ 1.49
UBE2F-215ENST00000441728 IDH1O75874 414 aaKnown RBP24.36■■□□□ 1.49
UBE2F-215ENST00000441728 CYP2E1P05181 493 aaPredicted RBP24.36■■□□□ 1.49
UBE2F-215ENST00000441728 CYP7A1P22680 504 aa24.36■■□□□ 1.49
UBE2F-215ENST00000441728 ZAP70P43403 619 aa24.36■■□□□ 1.49
UBE2F-215ENST00000441728 USP17L2Q6R6M4 530 aa24.36■■□□□ 1.49
UBE2F-215ENST00000441728 CERS3Q8IU89 383 aa24.36■■□□□ 1.49
UBE2F-215ENST00000441728 XRCC5P13010 732 aaKnown RBP24.35■■□□□ 1.49
UBE2F-215ENST00000441728 RGS2P41220 211 aa24.35■■□□□ 1.49
UBE2F-215ENST00000441728 GLRX3O76003 335 aaKnown RBP24.34■■□□□ 1.49
UBE2F-215ENST00000441728 ERVK-9P63128 1117 aa24.34■■□□□ 1.49
UBE2F-215ENST00000441728 ERVK-24P63145 666 aa24.34■■□□□ 1.49
UBE2F-215ENST00000441728 ATP8B2P98198 1209 aa24.34■■□□□ 1.49
UBE2F-215ENST00000441728 POLA2Q14181 598 aa24.34■■□□□ 1.49
UBE2F-215ENST00000441728 WDR78Q5VTH9 848 aa24.34■■□□□ 1.49
UBE2F-215ENST00000441728 SLC17A8Q8NDX2 589 aa24.34■■□□□ 1.49
UBE2F-215ENST00000441728 DNAJC18Q9H819 358 aa24.34■■□□□ 1.49
UBE2F-215ENST00000441728 DYNLL1P63167 89 aaKnown RBP24.33■■□□□ 1.49
UBE2F-215ENST00000441728 CCNA1P78396 465 aa24.33■■□□□ 1.49
UBE2F-215ENST00000441728 ZYXQ15942 572 aaKnown RBP24.33■■□□□ 1.49
UBE2F-215ENST00000441728 ADGRA1Q86SQ6 560 aa24.33■■□□□ 1.49
UBE2F-215ENST00000441728 ZNF512BQ96KM6 892 aaPredicted RBP24.33■■□□□ 1.49
UBE2F-215ENST00000441728 TXNRD2Q9NNW7 524 aa24.33■■□□□ 1.49
UBE2F-215ENST00000441728 OGDHLQ9ULD0 1010 aa24.33■■□□□ 1.49
UBE2F-215ENST00000441728 GH2P01242 217 aa24.32■■□□□ 1.48
UBE2F-215ENST00000441728 SYN1P17600 705 aa24.32■■□□□ 1.48
UBE2F-215ENST00000441728 PLEKHH3Q7Z736 793 aa24.32■■□□□ 1.48
UBE2F-215ENST00000441728 METTL16Q86W50 562 aaKnown RBP24.32■■□□□ 1.48
UBE2F-215ENST00000441728 SSH3Q8TE77 659 aa24.32■■□□□ 1.48
UBE2F-215ENST00000441728 LRCH3Q96II8 777 aa24.32■■□□□ 1.48
UBE2F-215ENST00000441728 C1orf115Q9H7X2 142 aa24.32■■□□□ 1.48
UBE2F-215ENST00000441728 PIH1D3Q9NQM4 214 aaKnown RBP24.32■■□□□ 1.48
UBE2F-215ENST00000441728 SIPA1L1O43166 1804 aa24.32■■□□□ 1.48
UBE2F-215ENST00000441728 PEX10O60683 326 aa24.31■■□□□ 1.48
UBE2F-215ENST00000441728 BMP8BP34820 402 aa24.31■■□□□ 1.48
UBE2F-215ENST00000441728 USP14P54578 494 aa24.31■■□□□ 1.48
UBE2F-215ENST00000441728 JAG1P78504 1218 aa24.31■■□□□ 1.48
UBE2F-215ENST00000441728 DDX60LQ5H9U9 1706 aaKnown RBP24.31■■□□□ 1.48
UBE2F-215ENST00000441728 GPR142Q7Z601 462 aa24.31■■□□□ 1.48
UBE2F-215ENST00000441728 TTC6Q86TZ1 520 aa24.31■■□□□ 1.48
UBE2F-215ENST00000441728 ITPRIPQ8IWB1 547 aa24.31■■□□□ 1.48
UBE2F-215ENST00000441728 MIGA1Q8NAN2 632 aa24.31■■□□□ 1.48
UBE2F-215ENST00000441728 APBA2Q99767 749 aa24.31■■□□□ 1.48
UBE2F-215ENST00000441728 CCDC8Q9H0W5 538 aaPredicted RBP24.31■■□□□ 1.48
UBE2F-215ENST00000441728 CABP5Q9NP86 173 aa24.31■■□□□ 1.48
UBE2F-215ENST00000441728 RBPJLQ9UBG7 517 aa24.31■■□□□ 1.48
UBE2F-215ENST00000441728 USP17L15C9J2P7 530 aa24.3■■□□□ 1.48
UBE2F-215ENST00000441728 USP17L13C9JLJ4 530 aa24.3■■□□□ 1.48
UBE2F-215ENST00000441728 USP17L11C9JVI0 530 aa24.3■■□□□ 1.48
UBE2F-215ENST00000441728 USP17L18D6R9N7 530 aa24.3■■□□□ 1.48
UBE2F-215ENST00000441728 USP17L22D6RA61 530 aa24.3■■□□□ 1.48
UBE2F-215ENST00000441728 USP17L17D6RBQ6 530 aa24.3■■□□□ 1.48
UBE2F-215ENST00000441728 USP17L19D6RCP7 530 aa24.3■■□□□ 1.48
UBE2F-215ENST00000441728 USP17L20D6RJB6 530 aa24.3■■□□□ 1.48
UBE2F-215ENST00000441728 USP17L24Q0WX57 530 aa24.3■■□□□ 1.48
UBE2F-215ENST00000441728 MAP3K12Q12852 859 aa24.3■■□□□ 1.48
UBE2F-215ENST00000441728 RAB3GAP1Q15042 981 aa24.3■■□□□ 1.48
UBE2F-215ENST00000441728 SHROOM1Q2M3G4 852 aaPredicted RBP24.3■■□□□ 1.48
UBE2F-215ENST00000441728 MAP3K21Q5TCX8 1036 aa24.3■■□□□ 1.48
UBE2F-215ENST00000441728 MAGEB6Q8N7X4 407 aa24.3■■□□□ 1.48
UBE2F-215ENST00000441728 GDF15Q99988 308 aa24.3■■□□□ 1.48
UBE2F-215ENST00000441728 SERPINB13Q9UIV8 391 aa24.3■■□□□ 1.48
UBE2F-215ENST00000441728 IVNS1ABPQ9Y6Y0 642 aa24.3■■□□□ 1.48
UBE2F-215ENST00000441728 FOCADQ5VW36 1801 aa24.3■■□□□ 1.48
UBE2F-215ENST00000441728 ALPK3Q96L96 1907 aa24.29■■□□□ 1.48
UBE2F-215ENST00000441728 SOX1O00570 391 aaPredicted RBP24.29■■□□□ 1.48
UBE2F-215ENST00000441728 PORCNQ9H237 461 aa24.29■■□□□ 1.48
UBE2F-215ENST00000441728 EMILIN3Q9NT22 766 aa24.29■■□□□ 1.48
UBE2F-215ENST00000441728 DBNLQ9UJU6 430 aaKnown RBP24.29■■□□□ 1.48
UBE2F-215ENST00000441728 CDK5RAP2Q96SN8 1893 aa24.29■■□□□ 1.48
UBE2F-215ENST00000441728 CACNB2Q08289 660 aaPredicted RBP24.28■■□□□ 1.48
UBE2F-215ENST00000441728 Q3C1V9 767 aa24.28■■□□□ 1.48
UBE2F-215ENST00000441728 MFSD14CQ5VZR4 134 aa24.28■■□□□ 1.48
UBE2F-215ENST00000441728 UBE2OQ9C0C9 1292 aaKnown RBP24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms