RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 KIF5BP33176 963 aa15.26■□□□□ 0.03
CPSF4-206ENST00000441580 GTF2IP78347 998 aa15.26■□□□□ 0.03
CPSF4-206ENST00000441580 EZH2Q15910 746 aaKnown RBP15.26■□□□□ 0.03
CPSF4-206ENST00000441580 GRIK5Q16478 980 aa15.26■□□□□ 0.03
CPSF4-206ENST00000441580 DCAF8Q5TAQ9 597 aa15.26■□□□□ 0.03
CPSF4-206ENST00000441580 NBPF11Q86T75 865 aa15.26■□□□□ 0.03
CPSF4-206ENST00000441580 CRACR2BQ8N4Y2 399 aaPredicted RBP15.26■□□□□ 0.03
CPSF4-206ENST00000441580 JMYQ8N9B5 988 aa15.26■□□□□ 0.03
CPSF4-206ENST00000441580 TGFBRAP1Q8WUH2 860 aa15.26■□□□□ 0.03
CPSF4-206ENST00000441580 ZNF622Q969S3 477 aaKnown RBP eCLIP15.26■□□□□ 0.03
CPSF4-206ENST00000441580 PGBD1Q96JS3 809 aa15.26■□□□□ 0.03
CPSF4-206ENST00000441580 MAP3K14Q99558 947 aa15.26■□□□□ 0.03
CPSF4-206ENST00000441580 RBSNQ9H1K0 784 aa15.26■□□□□ 0.03
CPSF4-206ENST00000441580 TCP11L1Q9NUJ3 509 aa15.26■□□□□ 0.03
CPSF4-206ENST00000441580 DAGLAQ9Y4D2 1042 aa15.26■□□□□ 0.03
CPSF4-206ENST00000441580 PSME4Q14997 1843 aa15.25■□□□□ 0.03
CPSF4-206ENST00000441580 SLX4Q8IY92 1834 aa15.25■□□□□ 0.03
CPSF4-206ENST00000441580 KIF28PB7ZC32 967 aa15.25■□□□□ 0.03
CPSF4-206ENST00000441580 CTAGE5O15320 804 aa15.25■□□□□ 0.03
CPSF4-206ENST00000441580 MMP1P03956 469 aa15.25■□□□□ 0.03
CPSF4-206ENST00000441580 CCDC192P0DO97 292 aa15.25■□□□□ 0.03
CPSF4-206ENST00000441580 LIG1P18858 919 aa15.25■□□□□ 0.03
CPSF4-206ENST00000441580 U2AF2P26368 475 aaKnown RBP eCLIP15.25■□□□□ 0.03
CPSF4-206ENST00000441580 GRIPAP1Q4V328 841 aa15.25■□□□□ 0.03
CPSF4-206ENST00000441580 RBM43Q6ZSC3 357 aaKnown RBP15.25■□□□□ 0.03
CPSF4-206ENST00000441580 TMTC3Q6ZXV5 915 aa15.25■□□□□ 0.03
CPSF4-206ENST00000441580 PODNQ7Z5L7 613 aa15.25■□□□□ 0.03
CPSF4-206ENST00000441580 DGKHQ86XP1 1220 aa15.25■□□□□ 0.03
CPSF4-206ENST00000441580 ANKS1AQ92625 1134 aa15.25■□□□□ 0.03
CPSF4-206ENST00000441580 TNMDQ9H2S6 317 aa15.25■□□□□ 0.03
CPSF4-206ENST00000441580 MYH8P13535 1937 aa15.25■□□□□ 0.03
CPSF4-206ENST00000441580 KIF13BQ9NQT8 1826 aa15.24■□□□□ 0.03
CPSF4-206ENST00000441580 MYO3BQ8WXR4 1341 aa15.24■□□□□ 0.03
CPSF4-206ENST00000441580 CNTNAP5Q8WYK1 1306 aa15.24■□□□□ 0.03
CPSF4-206ENST00000441580 PRPF3O43395 683 aaKnown RBP15.24■□□□□ 0.03
CPSF4-206ENST00000441580 ME1P48163 572 aa15.24■□□□□ 0.03
CPSF4-206ENST00000441580 RHBDL3P58872 404 aa15.24■□□□□ 0.03
CPSF4-206ENST00000441580 FAM160A1Q05DH4 1040 aa15.24■□□□□ 0.03
CPSF4-206ENST00000441580 TROAPQ12815 778 aa15.24■□□□□ 0.03
CPSF4-206ENST00000441580 SF3A1Q15459 793 aaKnown RBP15.24■□□□□ 0.03
CPSF4-206ENST00000441580 UVSSAQ2YD98 709 aa15.24■□□□□ 0.03
CPSF4-206ENST00000441580 ANO1Q5XXA6 986 aa15.24■□□□□ 0.03
CPSF4-206ENST00000441580 OTUD7BQ6GQQ9 843 aa15.24■□□□□ 0.03
CPSF4-206ENST00000441580 C16orf86Q6ZW13 317 aa15.24■□□□□ 0.03
CPSF4-206ENST00000441580 MAPKAPK5Q8IW41 473 aa15.24■□□□□ 0.03
CPSF4-206ENST00000441580 LINC00301Q8NCQ3 95 aa15.24■□□□□ 0.03
CPSF4-206ENST00000441580 SUPT20HQ8NEM7 779 aa15.24■□□□□ 0.03
CPSF4-206ENST00000441580 MRPS27Q92552 414 aaKnown RBP15.24■□□□□ 0.03
CPSF4-206ENST00000441580 FBXW7Q969H0 707 aa15.24■□□□□ 0.03
CPSF4-206ENST00000441580 AIFM3Q96NN9 605 aa15.24■□□□□ 0.03
CPSF4-206ENST00000441580 FOXP1Q9H334 677 aaPredicted RBP15.24■□□□□ 0.03
CPSF4-206ENST00000441580 KAT14Q9H8E8 782 aa15.24■□□□□ 0.03
CPSF4-206ENST00000441580 MKNK2Q9HBH9 465 aa15.24■□□□□ 0.03
CPSF4-206ENST00000441580 BRMS1Q9HCU9 246 aa15.24■□□□□ 0.03
CPSF4-206ENST00000441580 DACT1Q9NYF0 836 aa15.24■□□□□ 0.03
CPSF4-206ENST00000441580 ADAMTSL1Q8N6G6 1762 aa15.24■□□□□ 0.03
CPSF4-206ENST00000441580 SMIM22K7EJ46 135 aa15.23■□□□□ 0.03
CPSF4-206ENST00000441580 RIMBP2O15034 1052 aa15.23■□□□□ 0.03
CPSF4-206ENST00000441580 SPTLC2O15270 562 aa15.23■□□□□ 0.03
CPSF4-206ENST00000441580 KINO60870 393 aaKnown RBP15.23■□□□□ 0.03
CPSF4-206ENST00000441580 TSPY3P0CV98 308 aa15.23■□□□□ 0.03
CPSF4-206ENST00000441580 TSPY8P0CW00 308 aa15.23■□□□□ 0.03
CPSF4-206ENST00000441580 GNAQP50148 359 aa15.23■□□□□ 0.03
CPSF4-206ENST00000441580 EN1Q05925 392 aaPredicted RBP15.23■□□□□ 0.03
CPSF4-206ENST00000441580 FBXO41Q8TF61 875 aa15.23■□□□□ 0.03
CPSF4-206ENST00000441580 PPP1R9BQ96SB3 815 aa15.23■□□□□ 0.03
CPSF4-206ENST00000441580 FUCA2Q9BTY2 467 aa15.23■□□□□ 0.03
CPSF4-206ENST00000441580 FTOQ9C0B1 505 aaKnown RBP eCLIP15.23■□□□□ 0.03
CPSF4-206ENST00000441580 TAOK2Q9UL54 1235 aa15.23■□□□□ 0.03
CPSF4-206ENST00000441580 PPP6R2O75170 966 aa15.22■□□□□ 0.03
CPSF4-206ENST00000441580 CEBPZQ03701 1054 aaKnown RBP15.22■□□□□ 0.03
CPSF4-206ENST00000441580 TPRNQ4KMQ1 711 aa15.22■□□□□ 0.03
CPSF4-206ENST00000441580 ADALQ6DHV7 355 aa15.22■□□□□ 0.03
CPSF4-206ENST00000441580 HHIPL2Q6UWX4 724 aa15.22■□□□□ 0.03
CPSF4-206ENST00000441580 NOSTRINQ8IVI9 506 aa15.22■□□□□ 0.03
CPSF4-206ENST00000441580 CCAR1Q8IX12 1150 aaKnown RBP15.22■□□□□ 0.03
CPSF4-206ENST00000441580 DIS3L2Q8IYB7 885 aaKnown RBP15.22■□□□□ 0.03
CPSF4-206ENST00000441580 ZNF444Q8N0Y2 327 aaPredicted RBP15.22■□□□□ 0.03
CPSF4-206ENST00000441580 FAM177A1Q8N128 213 aaPredicted RBP15.22■□□□□ 0.03
CPSF4-206ENST00000441580 TEKT1Q969V4 418 aa15.22■□□□□ 0.03
CPSF4-206ENST00000441580 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.22■□□□□ 0.03
CPSF4-206ENST00000441580 CAVIN2O95810 425 aa15.21■□□□□ 0.03
CPSF4-206ENST00000441580 TFAP4Q01664 338 aa15.21■□□□□ 0.03
CPSF4-206ENST00000441580 FUT2Q10981 343 aa15.21■□□□□ 0.03
CPSF4-206ENST00000441580 GRM4Q14833 912 aa15.21■□□□□ 0.03
CPSF4-206ENST00000441580 RILPL1Q5EBL4 403 aa15.21■□□□□ 0.03
CPSF4-206ENST00000441580 FAM47AQ5JRC9 791 aa15.21■□□□□ 0.03
CPSF4-206ENST00000441580 FSIP1Q8NA03 581 aa15.21■□□□□ 0.03
CPSF4-206ENST00000441580 SLC16A10Q8TF71 515 aa15.21■□□□□ 0.03
CPSF4-206ENST00000441580 TRIM44Q96DX7 344 aaPredicted RBP15.21■□□□□ 0.03
CPSF4-206ENST00000441580 TTF2Q9UNY4 1162 aaKnown RBP15.21■□□□□ 0.03
CPSF4-206ENST00000441580 MORC2Q9Y6X9 1032 aaPredicted RBP15.21■□□□□ 0.03
CPSF4-206ENST00000441580 NR1I2O75469 434 aa15.2■□□□□ 0.02
CPSF4-206ENST00000441580 PLEKHA8P1O95397 391 aa15.2■□□□□ 0.02
CPSF4-206ENST00000441580 RASA1P20936 1047 aa15.2■□□□□ 0.02
CPSF4-206ENST00000441580 HDLBPQ00341 1268 aaKnown RBP15.2■□□□□ 0.02
CPSF4-206ENST00000441580 SLC39A14Q15043 492 aa15.2■□□□□ 0.02
CPSF4-206ENST00000441580 STRIP1Q5VSL9 837 aa15.2■□□□□ 0.02
CPSF4-206ENST00000441580 RCSD1Q6JBY9 416 aa15.2■□□□□ 0.02
CPSF4-206ENST00000441580 CERS5Q8N5B7 392 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms