RNA–Protein interactions for RNA: ENST00000441542.6

HDAC9-214, Transcript of histone deacetylase 9, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HDAC9, Length 3,210 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-214ENST00000441542 RNASE9P60153 205 aaKnown RBP8.49□□□□□ -1.05
HDAC9-214ENST00000441542 POSTNQ15063 836 aa8.49□□□□□ -1.05
HDAC9-214ENST00000441542 TMCO4Q5TGY1 634 aa8.49□□□□□ -1.05
HDAC9-214ENST00000441542 HDAC7Q8WUI4 952 aa8.49□□□□□ -1.05
HDAC9-214ENST00000441542 CCDC114Q96M63 670 aa8.49□□□□□ -1.05
HDAC9-214ENST00000441542 MYD88Q99836 296 aa8.49□□□□□ -1.05
HDAC9-214ENST00000441542 NBPF3Q9H094 633 aa8.49□□□□□ -1.05
HDAC9-214ENST00000441542 VEZTQ9HBM0 779 aa8.49□□□□□ -1.05
HDAC9-214ENST00000441542 POLR3EQ9NVU0 708 aa8.49□□□□□ -1.05
HDAC9-214ENST00000441542 EHD2Q9NZN4 543 aa8.49□□□□□ -1.05
HDAC9-214ENST00000441542 KCNJ14Q9UNX9 436 aa8.49□□□□□ -1.05
HDAC9-214ENST00000441542 ZNF609O15014 1411 aa8.49□□□□□ -1.05
HDAC9-214ENST00000441542 RNF225M0QZC1 329 aaPredicted RBP8.49□□□□□ -1.05
HDAC9-214ENST00000441542 IRF6O14896 467 aa8.49□□□□□ -1.05
HDAC9-214ENST00000441542 PRPF6O94906 941 aaKnown RBP8.49□□□□□ -1.05
HDAC9-214ENST00000441542 KRT9P35527 623 aa8.49□□□□□ -1.05
HDAC9-214ENST00000441542 SATB1Q01826 763 aa8.49□□□□□ -1.05
HDAC9-214ENST00000441542 TRIM29Q14134 588 aa8.49□□□□□ -1.05
HDAC9-214ENST00000441542 CEP85LQ5SZL2 805 aa8.49□□□□□ -1.05
HDAC9-214ENST00000441542 CCDC122Q5T0U0 273 aa8.49□□□□□ -1.05
HDAC9-214ENST00000441542 KRT40Q6A162 431 aa8.49□□□□□ -1.05
HDAC9-214ENST00000441542 NUTM2AQ8IVF1 878 aaPredicted RBP8.49□□□□□ -1.05
HDAC9-214ENST00000441542 COG1Q8WTW3 980 aa8.49□□□□□ -1.05
HDAC9-214ENST00000441542 PPANQ9NQ55 473 aaKnown RBP8.49□□□□□ -1.05
HDAC9-214ENST00000441542 GBP2P32456 591 aaPredicted RBP8.48□□□□□ -1.05
HDAC9-214ENST00000441542 TBX2Q13207 712 aaPredicted RBP8.48□□□□□ -1.05
HDAC9-214ENST00000441542 SLC39A14Q15043 492 aa8.48□□□□□ -1.05
HDAC9-214ENST00000441542 FILIP1LQ4L180 1135 aa8.48□□□□□ -1.05
HDAC9-214ENST00000441542 UBE3BQ7Z3V4 1068 aa8.48□□□□□ -1.05
HDAC9-214ENST00000441542 POTEDQ86YR6 584 aa8.48□□□□□ -1.05
HDAC9-214ENST00000441542 JMYQ8N9B5 988 aa8.48□□□□□ -1.05
HDAC9-214ENST00000441542 ZKSCAN4Q969J2 545 aaPredicted RBP8.48□□□□□ -1.05
HDAC9-214ENST00000441542 ADGRL3Q9HAR2 1447 aa8.48□□□□□ -1.05
HDAC9-214ENST00000441542 CPP00450 1065 aa8.48□□□□□ -1.05
HDAC9-214ENST00000441542 MYBL1P10243 752 aa8.48□□□□□ -1.05
HDAC9-214ENST00000441542 HSPD1P10809 573 aaKnown RBP8.48□□□□□ -1.05
HDAC9-214ENST00000441542 GUCY2FP51841 1108 aa8.48□□□□□ -1.05
HDAC9-214ENST00000441542 USP14P54578 494 aa8.48□□□□□ -1.05
HDAC9-214ENST00000441542 ERVK-24P63145 666 aa8.48□□□□□ -1.05
HDAC9-214ENST00000441542 NEDD9Q14511 834 aa8.48□□□□□ -1.05
HDAC9-214ENST00000441542 WHAMMP3Q1A5X7 153 aa8.48□□□□□ -1.05
HDAC9-214ENST00000441542 SMCR8Q8TEV9 937 aaPredicted RBP8.48□□□□□ -1.05
HDAC9-214ENST00000441542 IFT81Q8WYA0 676 aa8.48□□□□□ -1.05
HDAC9-214ENST00000441542 KAZALD1Q96I82 304 aa8.48□□□□□ -1.05
HDAC9-214ENST00000441542 SLC26A6Q9BXS9 759 aa8.48□□□□□ -1.05
HDAC9-214ENST00000441542 BLZF1Q9H2G9 400 aa8.48□□□□□ -1.05
HDAC9-214ENST00000441542 TUBE1Q9UJT0 475 aa8.48□□□□□ -1.05
HDAC9-214ENST00000441542 CTNND2Q9UQB3 1225 aa8.48□□□□□ -1.05
HDAC9-214ENST00000441542 USP42Q9H9J4 1324 aaKnown RBP8.48□□□□□ -1.05
HDAC9-214ENST00000441542 ESYT3A0FGR9 886 aa8.48□□□□□ -1.05
HDAC9-214ENST00000441542 MYO1BO43795 1136 aa8.48□□□□□ -1.05
HDAC9-214ENST00000441542 KRT14P02533 472 aa8.48□□□□□ -1.05
HDAC9-214ENST00000441542 CYP27A1Q02318 531 aa8.48□□□□□ -1.05
HDAC9-214ENST00000441542 PPFIA1Q13136 1202 aa8.48□□□□□ -1.05
HDAC9-214ENST00000441542 SF3B2Q13435 895 aaKnown RBP8.48□□□□□ -1.05
HDAC9-214ENST00000441542 TNNI3KQ59H18 835 aa8.48□□□□□ -1.05
HDAC9-214ENST00000441542 IQCA1Q86XH1 822 aa8.48□□□□□ -1.05
HDAC9-214ENST00000441542 INCENPQ9NQS7 918 aa8.48□□□□□ -1.05
HDAC9-214ENST00000441542 FPGT-TNNI3KV9GXZ4 949 aa8.48□□□□□ -1.05
HDAC9-214ENST00000441542 SBNO1A3KN83 1393 aa8.48□□□□□ -1.05
HDAC9-214ENST00000441542 C3P01024 1663 aa8.47□□□□□ -1.05
HDAC9-214ENST00000441542 DLG5Q8TDM6 1919 aa8.47□□□□□ -1.05
HDAC9-214ENST00000441542 AGPSO00116 658 aa8.47□□□□□ -1.05
HDAC9-214ENST00000441542 EIF3HO15372 352 aaKnown RBP eCLIP8.47□□□□□ -1.05
HDAC9-214ENST00000441542 MFAP3LO75121 409 aa8.47□□□□□ -1.05
HDAC9-214ENST00000441542 ERCC3P19447 782 aa8.47□□□□□ -1.05
HDAC9-214ENST00000441542 EIF4A1P60842 406 aaKnown RBP8.47□□□□□ -1.05
HDAC9-214ENST00000441542 SLC39A6Q13433 755 aa8.47□□□□□ -1.05
HDAC9-214ENST00000441542 ATL3Q6DD88 541 aa8.47□□□□□ -1.05
HDAC9-214ENST00000441542 PIAS4Q8N2W9 510 aaPredicted RBP8.47□□□□□ -1.05
HDAC9-214ENST00000441542 RNF217Q8TC41 542 aa8.47□□□□□ -1.05
HDAC9-214ENST00000441542 MED15Q96RN5 788 aa8.47□□□□□ -1.05
HDAC9-214ENST00000441542 GOLGA6L7A0A1B0GV03 622 aa8.47□□□□□ -1.05
HDAC9-214ENST00000441542 hCG_1642624A0A1W2PR95 340 aa8.47□□□□□ -1.05
HDAC9-214ENST00000441542 FAM170AA1A519 330 aa8.47□□□□□ -1.05
HDAC9-214ENST00000441542 GPTP24298 496 aa8.47□□□□□ -1.05
HDAC9-214ENST00000441542 NAP1L1P55209 391 aaKnown RBP8.47□□□□□ -1.05
HDAC9-214ENST00000441542 MYBPC2Q14324 1141 aa8.47□□□□□ -1.05
HDAC9-214ENST00000441542 RRP12Q5JTH9 1297 aaKnown RBP8.47□□□□□ -1.05
HDAC9-214ENST00000441542 MROH1Q8NDA8 1641 aa8.47□□□□□ -1.05
HDAC9-214ENST00000441542 JAKMIP2Q96AA8 810 aa8.47□□□□□ -1.05
HDAC9-214ENST00000441542 RBM33Q96EV2 1170 aaKnown RBP8.47□□□□□ -1.05
HDAC9-214ENST00000441542 SENP2Q9HC62 589 aa8.47□□□□□ -1.05
HDAC9-214ENST00000441542 SAR1BQ9Y6B6 198 aa8.47□□□□□ -1.05
HDAC9-214ENST00000441542 DUSP10Q9Y6W6 482 aa8.47□□□□□ -1.05
HDAC9-214ENST00000441542 BTBD18B2RXH4 712 aa8.46□□□□□ -1.05
HDAC9-214ENST00000441542 E7EVH7 732 aa8.46□□□□□ -1.05
HDAC9-214ENST00000441542 GYPCP04921 128 aa8.46□□□□□ -1.05
HDAC9-214ENST00000441542 IDEP14735 1019 aa8.46□□□□□ -1.05
HDAC9-214ENST00000441542 GCKP35557 465 aa8.46□□□□□ -1.05
HDAC9-214ENST00000441542 LMOD2Q6P5Q4 547 aa8.46□□□□□ -1.05
HDAC9-214ENST00000441542 ZNF530Q6P9A1 599 aaPredicted RBP8.46□□□□□ -1.05
HDAC9-214ENST00000441542 BRAPQ7Z569 592 aa8.46□□□□□ -1.05
HDAC9-214ENST00000441542 ANKRD13CQ8N6S4 541 aa8.46□□□□□ -1.05
HDAC9-214ENST00000441542 ARHGEF28Q8N1W1 1705 aaKnown RBP8.46□□□□□ -1.05
HDAC9-214ENST00000441542 SYNRGQ9UMZ2 1314 aa8.46□□□□□ -1.06
HDAC9-214ENST00000441542 M0R2C6 588 aa8.46□□□□□ -1.06
HDAC9-214ENST00000441542 PDE2AO00408 941 aaPredicted RBP8.46□□□□□ -1.06
HDAC9-214ENST00000441542 OPLAHO14841 1288 aa8.46□□□□□ -1.06
HDAC9-214ENST00000441542 UPP2O95045 317 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms