RNA–Protein interactions for RNA: ENST00000441238.1

TGFA-IT1-201, TGFA intronic transcript 1, humanhuman

TSL 5 BASIC

Gene TGFA-IT1, Length 436 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFA-IT1-201ENST00000441238 PRMT2P55345 433 aa12.33□□□□□ -0.44
TGFA-IT1-201ENST00000441238 KIF22Q14807 665 aa12.33□□□□□ -0.44
TGFA-IT1-201ENST00000441238 GADL1Q6ZQY3 521 aa12.33□□□□□ -0.44
TGFA-IT1-201ENST00000441238 LCORLQ8N3X6 602 aa12.33□□□□□ -0.44
TGFA-IT1-201ENST00000441238 CRBNQ96SW2 442 aa12.33□□□□□ -0.44
TGFA-IT1-201ENST00000441238 CPA4Q9UI42 421 aa12.33□□□□□ -0.44
TGFA-IT1-201ENST00000441238 ZBTB21Q9ULJ3 1066 aa12.33□□□□□ -0.44
TGFA-IT1-201ENST00000441238 CEP290O15078 2479 aa12.33□□□□□ -0.44
TGFA-IT1-201ENST00000441238 TTC41PQ6P2S7 1318 aa12.33□□□□□ -0.44
TGFA-IT1-201ENST00000441238 C19orf81C9J6K1 198 aa12.32□□□□□ -0.44
TGFA-IT1-201ENST00000441238 HOXA7P31268 230 aaPredicted RBP12.32□□□□□ -0.44
TGFA-IT1-201ENST00000441238 HDAC1Q13547 482 aaPredicted RBP12.32□□□□□ -0.44
TGFA-IT1-201ENST00000441238 SHROOM1Q2M3G4 852 aaPredicted RBP12.32□□□□□ -0.44
TGFA-IT1-201ENST00000441238 TREML2Q5T2D2 321 aa12.32□□□□□ -0.44
TGFA-IT1-201ENST00000441238 ZSCAN25Q6NSZ9 544 aa12.32□□□□□ -0.44
TGFA-IT1-201ENST00000441238 KBTBD3Q8NAB2 608 aa12.32□□□□□ -0.44
TGFA-IT1-201ENST00000441238 GPATCH3Q96I76 525 aa12.32□□□□□ -0.44
TGFA-IT1-201ENST00000441238 TRIM47Q96LD4 638 aa12.32□□□□□ -0.44
TGFA-IT1-201ENST00000441238 YTHDC1Q96MU7 727 aaKnown RBP12.32□□□□□ -0.44
TGFA-IT1-201ENST00000441238 TRIM34Q9BYJ4 488 aa12.32□□□□□ -0.44
TGFA-IT1-201ENST00000441238 ARHGAP39Q9C0H5 1083 aa12.32□□□□□ -0.44
TGFA-IT1-201ENST00000441238 ATP8A2Q9NTI2 1148 aa12.32□□□□□ -0.44
TGFA-IT1-201ENST00000441238 MKI67P46013 3256 aaKnown RBP12.32□□□□□ -0.44
TGFA-IT1-201ENST00000441238 SALL3Q9BXA9 1300 aa12.32□□□□□ -0.44
TGFA-IT1-201ENST00000441238 USP17L10C9JJH3 530 aa12.31□□□□□ -0.44
TGFA-IT1-201ENST00000441238 CHGBP05060 677 aa12.31□□□□□ -0.44
TGFA-IT1-201ENST00000441238 SHMT1P34896 483 aa12.31□□□□□ -0.44
TGFA-IT1-201ENST00000441238 HMGCS2P54868 508 aa12.31□□□□□ -0.44
TGFA-IT1-201ENST00000441238 MLLT1Q03111 559 aaPredicted RBP12.31□□□□□ -0.44
TGFA-IT1-201ENST00000441238 PABPC4Q13310 644 aaKnown RBP eCLIP12.31□□□□□ -0.44
TGFA-IT1-201ENST00000441238 SLFNL1Q499Z3 407 aa12.31□□□□□ -0.44
TGFA-IT1-201ENST00000441238 SDR42E1Q8WUS8 393 aa12.31□□□□□ -0.44
TGFA-IT1-201ENST00000441238 BCL11AQ9H165 835 aa12.31□□□□□ -0.44
TGFA-IT1-201ENST00000441238 ARMT1Q9H993 441 aa12.31□□□□□ -0.44
TGFA-IT1-201ENST00000441238 PNMA3Q9UL41 463 aa12.31□□□□□ -0.44
TGFA-IT1-201ENST00000441238 RLFQ13129 1914 aa12.31□□□□□ -0.44
TGFA-IT1-201ENST00000441238 MBD4O95243 580 aa12.3□□□□□ -0.44
TGFA-IT1-201ENST00000441238 GDF11O95390 407 aa12.3□□□□□ -0.44
TGFA-IT1-201ENST00000441238 GH2P01242 217 aa12.3□□□□□ -0.44
TGFA-IT1-201ENST00000441238 PSMC4P43686 418 aa12.3□□□□□ -0.44
TGFA-IT1-201ENST00000441238 GCLCP48506 637 aaPredicted RBP12.3□□□□□ -0.44
TGFA-IT1-201ENST00000441238 SOX10P56693 466 aa12.3□□□□□ -0.44
TGFA-IT1-201ENST00000441238 FAM110CQ1W6H9 321 aa12.3□□□□□ -0.44
TGFA-IT1-201ENST00000441238 SLC4A8Q2Y0W8 1093 aa12.3□□□□□ -0.44
TGFA-IT1-201ENST00000441238 CERKLQ49MI3 558 aaPredicted RBP12.3□□□□□ -0.44
TGFA-IT1-201ENST00000441238 PI4K2BQ8TCG2 481 aa12.3□□□□□ -0.44
TGFA-IT1-201ENST00000441238 GCC1Q96CN9 775 aa12.3□□□□□ -0.44
TGFA-IT1-201ENST00000441238 ZNF333Q96JL9 665 aa12.3□□□□□ -0.44
TGFA-IT1-201ENST00000441238 C12orf42Q96LP6 360 aa12.3□□□□□ -0.44
TGFA-IT1-201ENST00000441238 PUS7LQ9H0K6 701 aaKnown RBP12.3□□□□□ -0.44
TGFA-IT1-201ENST00000441238 ASCC2Q9H1I8 757 aaPredicted RBP12.3□□□□□ -0.44
TGFA-IT1-201ENST00000441238 MCM9Q9NXL9 1143 aa12.3□□□□□ -0.44
TGFA-IT1-201ENST00000441238 SRRDQ9UH36 339 aa12.3□□□□□ -0.44
TGFA-IT1-201ENST00000441238 PTCH2Q9Y6C5 1203 aa12.3□□□□□ -0.44
TGFA-IT1-201ENST00000441238 GREB1LQ9C091 1923 aaPredicted RBP12.29□□□□□ -0.44
TGFA-IT1-201ENST00000441238 ERC2O15083 957 aa12.29□□□□□ -0.44
TGFA-IT1-201ENST00000441238 PRKAB2O43741 272 aa12.29□□□□□ -0.44
TGFA-IT1-201ENST00000441238 POLR3DP05423 398 aaPredicted RBP12.29□□□□□ -0.44
TGFA-IT1-201ENST00000441238 ZFYP08048 801 aaPredicted RBP12.29□□□□□ -0.44
TGFA-IT1-201ENST00000441238 HOXD10P28358 340 aa12.29□□□□□ -0.44
TGFA-IT1-201ENST00000441238 GUCY1A2P33402 732 aa12.29□□□□□ -0.44
TGFA-IT1-201ENST00000441238 MTMR2Q13614 643 aa12.29□□□□□ -0.44
TGFA-IT1-201ENST00000441238 ABCB5Q2M3G0 1257 aa12.29□□□□□ -0.44
TGFA-IT1-201ENST00000441238 C12orf60Q5U649 245 aa12.29□□□□□ -0.44
TGFA-IT1-201ENST00000441238 SMCR8Q8TEV9 937 aaPredicted RBP12.29□□□□□ -0.44
TGFA-IT1-201ENST00000441238 KIAA1683Q9H0B3 1180 aa12.29□□□□□ -0.44
TGFA-IT1-201ENST00000441238 MORF4L1Q9UBU8 362 aa12.29□□□□□ -0.44
TGFA-IT1-201ENST00000441238 SWAP70Q9UH65 585 aa12.29□□□□□ -0.44
TGFA-IT1-201ENST00000441238 PLXNB2O15031 1838 aa12.29□□□□□ -0.44
TGFA-IT1-201ENST00000441238 PARP14Q460N5 1801 aa12.28□□□□□ -0.44
TGFA-IT1-201ENST00000441238 RNF113AO15541 343 aaKnown RBP12.28□□□□□ -0.44
TGFA-IT1-201ENST00000441238 GLRX3O76003 335 aaKnown RBP12.28□□□□□ -0.44
TGFA-IT1-201ENST00000441238 OSBPP22059 807 aa12.28□□□□□ -0.44
TGFA-IT1-201ENST00000441238 FCGRTP55899 365 aa12.28□□□□□ -0.44
TGFA-IT1-201ENST00000441238 EVX2Q03828 476 aa12.28□□□□□ -0.44
TGFA-IT1-201ENST00000441238 GIMAP6Q6P9H5 292 aa12.28□□□□□ -0.44
TGFA-IT1-201ENST00000441238 USP17L2Q6R6M4 530 aa12.28□□□□□ -0.44
TGFA-IT1-201ENST00000441238 NBPF11Q86T75 865 aa12.28□□□□□ -0.44
TGFA-IT1-201ENST00000441238 SMC5Q8IY18 1101 aa12.28□□□□□ -0.44
TGFA-IT1-201ENST00000441238 OTUD7AQ8TE49 926 aaPredicted RBP12.28□□□□□ -0.44
TGFA-IT1-201ENST00000441238 APPBP2Q92624 585 aa12.28□□□□□ -0.44
TGFA-IT1-201ENST00000441238 STRBPQ96SI9 672 aaKnown RBP12.28□□□□□ -0.44
TGFA-IT1-201ENST00000441238 EMILIN3Q9NT22 766 aa12.28□□□□□ -0.44
TGFA-IT1-201ENST00000441238 TMOD4Q9NZQ9 345 aa12.28□□□□□ -0.44
TGFA-IT1-201ENST00000441238 STAP2Q9UGK3 403 aa12.28□□□□□ -0.44
TGFA-IT1-201ENST00000441238 USP17L12C9JPN9 530 aa12.27□□□□□ -0.45
TGFA-IT1-201ENST00000441238 USP17L21D6R901 530 aa12.27□□□□□ -0.45
TGFA-IT1-201ENST00000441238 FMNL1O95466 1100 aaPredicted RBP12.27□□□□□ -0.45
TGFA-IT1-201ENST00000441238 CYP2D6P10635 497 aa12.27□□□□□ -0.45
TGFA-IT1-201ENST00000441238 MX1P20591 662 aa12.27□□□□□ -0.45
TGFA-IT1-201ENST00000441238 SLC9C1Q4G0N8 1177 aa12.27□□□□□ -0.45
TGFA-IT1-201ENST00000441238 SBK1Q52WX2 424 aa12.27□□□□□ -0.45
TGFA-IT1-201ENST00000441238 TSHZ3Q63HK5 1081 aa12.27□□□□□ -0.45
TGFA-IT1-201ENST00000441238 OSBP2Q969R2 916 aa12.27□□□□□ -0.45
TGFA-IT1-201ENST00000441238 CABP5Q9NP86 173 aa12.27□□□□□ -0.45
TGFA-IT1-201ENST00000441238 GSG1L2A8MUP6 293 aa12.26□□□□□ -0.45
TGFA-IT1-201ENST00000441238 USP14P54578 494 aa12.26□□□□□ -0.45
TGFA-IT1-201ENST00000441238 IRF5Q13568 498 aa12.26□□□□□ -0.45
TGFA-IT1-201ENST00000441238 LRRFIP1Q32MZ4 808 aaKnown RBP12.26□□□□□ -0.45
TGFA-IT1-201ENST00000441238 ANKRD45Q5TZF3 282 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms