RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 ADORA1P30542 326 aa7.32□□□□□ -1.24
PTPRR-204ENST00000440835 BACE1P56817 501 aa7.32□□□□□ -1.24
PTPRR-204ENST00000440835 CCDC158Q5M9N0 1113 aa7.32□□□□□ -1.24
PTPRR-204ENST00000440835 TEX11Q8IYF3 940 aa7.32□□□□□ -1.24
PTPRR-204ENST00000440835 MEIS3Q99687 375 aa7.32□□□□□ -1.24
PTPRR-204ENST00000440835 HMX1Q9NP08 348 aaPredicted RBP7.32□□□□□ -1.24
PTPRR-204ENST00000440835 DDX4Q9NQI0 724 aaKnown RBP7.32□□□□□ -1.24
PTPRR-204ENST00000440835 OGDHLQ9ULD0 1010 aa7.32□□□□□ -1.24
PTPRR-204ENST00000440835 GABRQQ9UN88 632 aa7.32□□□□□ -1.24
PTPRR-204ENST00000440835 ZNF236Q9UL36 1845 aa7.32□□□□□ -1.24
PTPRR-204ENST00000440835 A0A0U1RQG5 324 aaPredicted RBP7.31□□□□□ -1.24
PTPRR-204ENST00000440835 HLA-DOAP06340 250 aa7.31□□□□□ -1.24
PTPRR-204ENST00000440835 PDE4AP27815 886 aa7.31□□□□□ -1.24
PTPRR-204ENST00000440835 TIMM10P62072 90 aa7.31□□□□□ -1.24
PTPRR-204ENST00000440835 CHRDL2Q6WN34 429 aa7.31□□□□□ -1.24
PTPRR-204ENST00000440835 C12orf42Q96LP6 360 aa7.31□□□□□ -1.24
PTPRR-204ENST00000440835 TRIM34Q9BYJ4 488 aa7.31□□□□□ -1.24
PTPRR-204ENST00000440835 EHD4Q9H223 541 aa7.31□□□□□ -1.24
PTPRR-204ENST00000440835 GJD2Q9UKL4 321 aa7.31□□□□□ -1.24
PTPRR-204ENST00000440835 ALPK3Q96L96 1907 aa7.31□□□□□ -1.24
PTPRR-204ENST00000440835 TRIM75PA6NK02 468 aa7.31□□□□□ -1.24
PTPRR-204ENST00000440835 USP14P54578 494 aa7.31□□□□□ -1.24
PTPRR-204ENST00000440835 CCNA1P78396 465 aa7.31□□□□□ -1.24
PTPRR-204ENST00000440835 IRX3P78415 501 aaPredicted RBP7.31□□□□□ -1.24
PTPRR-204ENST00000440835 POLA2Q14181 598 aa7.31□□□□□ -1.24
PTPRR-204ENST00000440835 PDE3AQ14432 1141 aa7.31□□□□□ -1.24
PTPRR-204ENST00000440835 HSP90AA2PQ14568 343 aaPredicted RBP7.31□□□□□ -1.24
PTPRR-204ENST00000440835 MAP3K21Q5TCX8 1036 aa7.31□□□□□ -1.24
PTPRR-204ENST00000440835 NAA16Q6N069 864 aaPredicted RBP7.31□□□□□ -1.24
PTPRR-204ENST00000440835 USP17L2Q6R6M4 530 aa7.31□□□□□ -1.24
PTPRR-204ENST00000440835 LBX2Q6XYB7 198 aa7.31□□□□□ -1.24
PTPRR-204ENST00000440835 GPRC5AQ8NFJ5 357 aa7.31□□□□□ -1.24
PTPRR-204ENST00000440835 NBPF3Q9H094 633 aa7.31□□□□□ -1.24
PTPRR-204ENST00000440835 ASCC2Q9H1I8 757 aaPredicted RBP7.31□□□□□ -1.24
PTPRR-204ENST00000440835 RAI14Q9P0K7 980 aa7.31□□□□□ -1.24
PTPRR-204ENST00000440835 LRP2BPQ9P2M1 347 aa7.31□□□□□ -1.24
PTPRR-204ENST00000440835 RBM27Q9P2N5 1060 aaKnown RBP7.31□□□□□ -1.24
PTPRR-204ENST00000440835 PA2G4Q9UQ80 394 aaKnown RBP7.31□□□□□ -1.24
PTPRR-204ENST00000440835 MYH1P12882 1939 aa7.3□□□□□ -1.24
PTPRR-204ENST00000440835 RBM10P98175 930 aaKnown RBP7.3□□□□□ -1.24
PTPRR-204ENST00000440835 SPP2Q13103 211 aa7.3□□□□□ -1.24
PTPRR-204ENST00000440835 PICALMQ13492 652 aa7.3□□□□□ -1.24
PTPRR-204ENST00000440835 NEUROD6Q96NK8 337 aa7.3□□□□□ -1.24
PTPRR-204ENST00000440835 NUDT12Q9BQG2 462 aa7.3□□□□□ -1.24
PTPRR-204ENST00000440835 BACH2Q9BYV9 841 aa7.3□□□□□ -1.24
PTPRR-204ENST00000440835 USP17L10C9JJH3 530 aa7.3□□□□□ -1.24
PTPRR-204ENST00000440835 MSCO60682 206 aa7.3□□□□□ -1.24
PTPRR-204ENST00000440835 RGS2P41220 211 aa7.3□□□□□ -1.24
PTPRR-204ENST00000440835 ANKRD13CQ8N6S4 541 aa7.3□□□□□ -1.24
PTPRR-204ENST00000440835 SSH3Q8TE77 659 aa7.3□□□□□ -1.24
PTPRR-204ENST00000440835 DEFB118Q96PH6 123 aa7.3□□□□□ -1.24
PTPRR-204ENST00000440835 RRP9O43818 475 aaKnown RBP7.29□□□□□ -1.24
PTPRR-204ENST00000440835 LRIT3Q3SXY7 679 aa7.29□□□□□ -1.24
PTPRR-204ENST00000440835 TTC39AQ5SRH9 613 aa7.29□□□□□ -1.24
PTPRR-204ENST00000440835 TREML2Q5T2D2 321 aa7.29□□□□□ -1.24
PTPRR-204ENST00000440835 ERC1Q8IUD2 1116 aa7.29□□□□□ -1.24
PTPRR-204ENST00000440835 ZNF384Q8TF68 577 aa7.29□□□□□ -1.24
PTPRR-204ENST00000440835 USP6NLQ92738 828 aa7.29□□□□□ -1.24
PTPRR-204ENST00000440835 C11orf49Q9H6J7 331 aa7.29□□□□□ -1.24
PTPRR-204ENST00000440835 RABGAP1Q9Y3P9 1069 aa7.29□□□□□ -1.24
PTPRR-204ENST00000440835 FRMPD3Q5JV73 1810 aa7.29□□□□□ -1.24
PTPRR-204ENST00000440835 MCAMP43121 646 aa7.29□□□□□ -1.24
PTPRR-204ENST00000440835 SLC4A3P48751 1232 aa7.29□□□□□ -1.24
PTPRR-204ENST00000440835 HMGCS2P54868 508 aa7.29□□□□□ -1.24
PTPRR-204ENST00000440835 ATP8B2P98198 1209 aa7.29□□□□□ -1.24
PTPRR-204ENST00000440835 HSP90AB4PQ58FF6 505 aa7.29□□□□□ -1.24
PTPRR-204ENST00000440835 GDF15Q99988 308 aa7.29□□□□□ -1.24
PTPRR-204ENST00000440835 MS4A1P11836 297 aa7.28□□□□□ -1.24
PTPRR-204ENST00000440835 ELNP15502 786 aa7.28□□□□□ -1.24
PTPRR-204ENST00000440835 ZKSCAN1P17029 563 aaPredicted RBP7.28□□□□□ -1.24
PTPRR-204ENST00000440835 HERVK_113P62684 666 aa7.28□□□□□ -1.24
PTPRR-204ENST00000440835 MAPK8IP2Q13387 824 aaPredicted RBP7.28□□□□□ -1.24
PTPRR-204ENST00000440835 TNNI3KQ59H18 835 aa7.28□□□□□ -1.24
PTPRR-204ENST00000440835 ZKSCAN2Q63HK3 967 aa7.28□□□□□ -1.24
PTPRR-204ENST00000440835 FAM109BQ6ICB4 259 aaPredicted RBP7.28□□□□□ -1.24
PTPRR-204ENST00000440835 TTC6Q86TZ1 520 aa7.28□□□□□ -1.24
PTPRR-204ENST00000440835 CRACR2BQ8N4Y2 399 aaPredicted RBP7.28□□□□□ -1.24
PTPRR-204ENST00000440835 CDCA7LQ96GN5 454 aa7.28□□□□□ -1.24
PTPRR-204ENST00000440835 APBA2Q99767 749 aa7.28□□□□□ -1.24
PTPRR-204ENST00000440835 FPGT-TNNI3KV9GXZ4 949 aa7.28□□□□□ -1.24
PTPRR-204ENST00000440835 DOCK3Q8IZD9 2030 aa7.28□□□□□ -1.24
PTPRR-204ENST00000440835 FLT1P17948 1338 aa7.28□□□□□ -1.24
PTPRR-204ENST00000440835 SLC15A5A6NIM6 579 aa7.28□□□□□ -1.24
PTPRR-204ENST00000440835 USP17L15C9J2P7 530 aa7.28□□□□□ -1.24
PTPRR-204ENST00000440835 USP17L13C9JLJ4 530 aa7.28□□□□□ -1.24
PTPRR-204ENST00000440835 USP17L11C9JVI0 530 aa7.28□□□□□ -1.24
PTPRR-204ENST00000440835 USP17L18D6R9N7 530 aa7.28□□□□□ -1.24
PTPRR-204ENST00000440835 USP17L22D6RA61 530 aa7.28□□□□□ -1.24
PTPRR-204ENST00000440835 USP17L17D6RBQ6 530 aa7.28□□□□□ -1.24
PTPRR-204ENST00000440835 USP17L19D6RCP7 530 aa7.28□□□□□ -1.24
PTPRR-204ENST00000440835 USP17L20D6RJB6 530 aa7.28□□□□□ -1.24
PTPRR-204ENST00000440835 CLSTN1O94985 981 aa7.28□□□□□ -1.24
PTPRR-204ENST00000440835 HOXC6P09630 235 aa7.28□□□□□ -1.24
PTPRR-204ENST00000440835 USP17L24Q0WX57 530 aa7.28□□□□□ -1.24
PTPRR-204ENST00000440835 TTF1Q15361 905 aaPredicted RBP7.28□□□□□ -1.24
PTPRR-204ENST00000440835 MORN1Q5T089 497 aa7.28□□□□□ -1.24
PTPRR-204ENST00000440835 TATDN1Q6P1N9 297 aa7.28□□□□□ -1.24
PTPRR-204ENST00000440835 PLEKHH3Q7Z736 793 aa7.28□□□□□ -1.24
PTPRR-204ENST00000440835 SH3RF3Q8TEJ3 882 aaPredicted RBP7.28□□□□□ -1.24
PTPRR-204ENST00000440835 ZBTB21Q9ULJ3 1066 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms