RNA–Protein interactions for RNA: ENST00000440126.7

APP-209, Transcript of amyloid beta precursor protein, humanhuman

TSL 2 BASIC

Gene APP, Length 2,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-209ENST00000440126 KRT23Q9C075 422 aa9.12□□□□□ -0.95
APP-209ENST00000440126 CPVLQ9H3G5 476 aa9.12□□□□□ -0.95
APP-209ENST00000440126 MCM9Q9NXL9 1143 aa9.12□□□□□ -0.95
APP-209ENST00000440126 PNPLA7Q6ZV29 1317 aa9.12□□□□□ -0.95
APP-209ENST00000440126 RTL9Q8NET4 1388 aa9.12□□□□□ -0.95
APP-209ENST00000440126 CACNA1SQ13698 1873 aa9.12□□□□□ -0.95
APP-209ENST00000440126 IRF6O14896 467 aa9.12□□□□□ -0.95
APP-209ENST00000440126 FOXN1O15353 648 aa9.12□□□□□ -0.95
APP-209ENST00000440126 GPSM2P81274 684 aa9.12□□□□□ -0.95
APP-209ENST00000440126 FAM160A1Q05DH4 1040 aa9.12□□□□□ -0.95
APP-209ENST00000440126 EARS2Q5JPH6 523 aaKnown RBP9.12□□□□□ -0.95
APP-209ENST00000440126 SLC10A5Q5PT55 438 aa9.12□□□□□ -0.95
APP-209ENST00000440126 CPLX2Q6PUV4 134 aaKnown RBP9.12□□□□□ -0.95
APP-209ENST00000440126 DIS3L2Q8IYB7 885 aaKnown RBP9.12□□□□□ -0.95
APP-209ENST00000440126 ENGASEQ8NFI3 743 aa9.12□□□□□ -0.95
APP-209ENST00000440126 MXD3Q9BW11 206 aa9.12□□□□□ -0.95
APP-209ENST00000440126 RTEL1Q9NZ71 1219 aa9.12□□□□□ -0.95
APP-209ENST00000440126 PYCARDQ9ULZ3 195 aa9.12□□□□□ -0.95
APP-209ENST00000440126 RREB1Q92766 1687 aa9.11□□□□□ -0.95
APP-209ENST00000440126 WNT7AO00755 349 aa9.11□□□□□ -0.95
APP-209ENST00000440126 UFL1O94874 794 aa9.11□□□□□ -0.95
APP-209ENST00000440126 PFKFB1P16118 471 aa9.11□□□□□ -0.95
APP-209ENST00000440126 SART3Q15020 963 aaKnown RBP9.11□□□□□ -0.95
APP-209ENST00000440126 DPCR1Q3MIW9 517 aa9.11□□□□□ -0.95
APP-209ENST00000440126 MAPKAPK5Q8IW41 473 aa9.11□□□□□ -0.95
APP-209ENST00000440126 FANCBQ8NB91 859 aa9.11□□□□□ -0.95
APP-209ENST00000440126 SH3RF3Q8TEJ3 882 aaPredicted RBP9.11□□□□□ -0.95
APP-209ENST00000440126 RPGRQ92834 1020 aaKnown RBP9.11□□□□□ -0.95
APP-209ENST00000440126 KCNF1Q9H3M0 494 aa9.11□□□□□ -0.95
APP-209ENST00000440126 DCP1AQ9NPI6 582 aaPredicted RBP9.11□□□□□ -0.95
APP-209ENST00000440126 V9GY48 417 aaPredicted RBP9.11□□□□□ -0.95
APP-209ENST00000440126 IFIT1BQ5T764 474 aaKnown RBP9.11□□□□□ -0.95
APP-209ENST00000440126 SGMS1Q86VZ5 419 aa9.11□□□□□ -0.95
APP-209ENST00000440126 GRAMD1CQ8IYS0 662 aa9.11□□□□□ -0.95
APP-209ENST00000440126 FMR1NBQ8N0W7 255 aaPredicted RBP9.11□□□□□ -0.95
APP-209ENST00000440126 FBXL16Q8N461 479 aa9.11□□□□□ -0.95
APP-209ENST00000440126 AOPEPQ8N6M6 819 aa9.11□□□□□ -0.95
APP-209ENST00000440126 ESR2Q92731 530 aa9.11□□□□□ -0.95
APP-209ENST00000440126 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.11□□□□□ -0.95
APP-209ENST00000440126 CNNM2Q9H8M5 875 aa9.11□□□□□ -0.95
APP-209ENST00000440126 ECM29Q5VYK3 1845 aa9.11□□□□□ -0.95
APP-209ENST00000440126 SERPINB2P05120 415 aa9.1□□□□□ -0.95
APP-209ENST00000440126 GYS1P13807 737 aa9.1□□□□□ -0.95
APP-209ENST00000440126 GNAT2P19087 354 aa9.1□□□□□ -0.95
APP-209ENST00000440126 USP5P45974 858 aa9.1□□□□□ -0.95
APP-209ENST00000440126 DDR1Q08345 913 aa9.1□□□□□ -0.95
APP-209ENST00000440126 RC3H1Q5TC82 1133 aaKnown RBP9.1□□□□□ -0.95
APP-209ENST00000440126 USP49Q70CQ1 688 aa9.1□□□□□ -0.95
APP-209ENST00000440126 TGFBRAP1Q8WUH2 860 aa9.1□□□□□ -0.95
APP-209ENST00000440126 ZSCAN10Q96SZ4 725 aaPredicted RBP9.1□□□□□ -0.95
APP-209ENST00000440126 CABP5Q9NP86 173 aa9.1□□□□□ -0.95
APP-209ENST00000440126 PCDHB6Q9Y5E3 794 aa9.1□□□□□ -0.95
APP-209ENST00000440126 USP17L3A6NCW0 530 aa9.1□□□□□ -0.95
APP-209ENST00000440126 USP17L4A6NCW7 530 aa9.1□□□□□ -0.95
APP-209ENST00000440126 C6orf229H3BNL8 230 aa9.1□□□□□ -0.95
APP-209ENST00000440126 TULP2O00295 520 aa9.1□□□□□ -0.95
APP-209ENST00000440126 CDKL5O76039 1030 aa9.1□□□□□ -0.95
APP-209ENST00000440126 ZNF202O95125 648 aa9.1□□□□□ -0.95
APP-209ENST00000440126 TNNT1P13805 278 aa9.1□□□□□ -0.95
APP-209ENST00000440126 LIFRP42702 1097 aa9.1□□□□□ -0.95
APP-209ENST00000440126 TOB1P50616 345 aaPredicted RBP9.1□□□□□ -0.95
APP-209ENST00000440126 PNOCQ13519 176 aa9.1□□□□□ -0.95
APP-209ENST00000440126 UVSSAQ2YD98 709 aa9.1□□□□□ -0.95
APP-209ENST00000440126 SHC4Q6S5L8 630 aa9.1□□□□□ -0.95
APP-209ENST00000440126 USP17L1Q7RTZ2 530 aa9.1□□□□□ -0.95
APP-209ENST00000440126 CCDC186Q7Z3E2 898 aa9.1□□□□□ -0.95
APP-209ENST00000440126 NBPF11Q86T75 865 aa9.1□□□□□ -0.95
APP-209ENST00000440126 BANK1Q8NDB2 785 aa9.1□□□□□ -0.95
APP-209ENST00000440126 MYRIPQ8NFW9 859 aa9.1□□□□□ -0.95
APP-209ENST00000440126 A0A1B0GUL6 1792 aa9.1□□□□□ -0.95
APP-209ENST00000440126 SRCAPQ6ZRS2 3230 aa9.1□□□□□ -0.95
APP-209ENST00000440126 TSPY2A6NKD2 308 aa9.09□□□□□ -0.95
APP-209ENST00000440126 BECN2A8MW95 431 aa9.09□□□□□ -0.95
APP-209ENST00000440126 FMNL1O95466 1100 aaPredicted RBP9.09□□□□□ -0.95
APP-209ENST00000440126 SEC23AQ15436 765 aa9.09□□□□□ -0.95
APP-209ENST00000440126 ADALQ6DHV7 355 aa9.09□□□□□ -0.95
APP-209ENST00000440126 TRIM22Q8IYM9 498 aa9.09□□□□□ -0.95
APP-209ENST00000440126 CRACR2BQ8N4Y2 399 aaPredicted RBP9.09□□□□□ -0.95
APP-209ENST00000440126 TIGD1Q96MW7 591 aa9.09□□□□□ -0.95
APP-209ENST00000440126 TMX1Q9H3N1 280 aa9.09□□□□□ -0.95
APP-209ENST00000440126 GOLGA8HP0CJ92 632 aa9.09□□□□□ -0.95
APP-209ENST00000440126 CAPN2P17655 700 aa9.09□□□□□ -0.95
APP-209ENST00000440126 CASP1P29466 404 aa9.09□□□□□ -0.95
APP-209ENST00000440126 GRAPQ13588 217 aa9.09□□□□□ -0.95
APP-209ENST00000440126 ZNF827Q17R98 1081 aa9.09□□□□□ -0.95
APP-209ENST00000440126 CCDC144BQ3MJ40 725 aa9.09□□□□□ -0.95
APP-209ENST00000440126 FILIP1Q7Z7B0 1213 aa9.09□□□□□ -0.95
APP-209ENST00000440126 GRAPLQ8TC17 118 aaPredicted RBP9.09□□□□□ -0.95
APP-209ENST00000440126 RNF41Q9H4P4 317 aaPredicted RBP9.09□□□□□ -0.95
APP-209ENST00000440126 POLR3EQ9NVU0 708 aa9.09□□□□□ -0.95
APP-209ENST00000440126 SCN7AQ01118 1682 aa9.09□□□□□ -0.95
APP-209ENST00000440126 WDR19Q8NEZ3 1342 aa9.09□□□□□ -0.96
APP-209ENST00000440126 CCDC66A2RUB6 948 aa9.09□□□□□ -0.96
APP-209ENST00000440126 GOLGA6L19H0YKK7 550 aa9.09□□□□□ -0.96
APP-209ENST00000440126 LDHBP07195 334 aaKnown RBP9.09□□□□□ -0.96
APP-209ENST00000440126 IFNAR1P17181 557 aa9.09□□□□□ -0.96
APP-209ENST00000440126 PLCD1P51178 756 aa9.09□□□□□ -0.96
APP-209ENST00000440126 RBM43Q6ZSC3 357 aaKnown RBP9.09□□□□□ -0.96
APP-209ENST00000440126 BRAPQ7Z569 592 aa9.09□□□□□ -0.96
APP-209ENST00000440126 PROM2Q8N271 834 aa9.09□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms