RNA–Protein interactions for RNA: ENST00000439286.5

GARNL3-206, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-206ENST00000439286 HOXA7P31268 230 aaPredicted RBP16.46■□□□□ 0.23
GARNL3-206ENST00000439286 CLASRPQ8N2M8 674 aaKnown RBP16.46■□□□□ 0.23
GARNL3-206ENST00000439286 GPRC5AQ8NFJ5 357 aa16.46■□□□□ 0.23
GARNL3-206ENST00000439286 SHISA4Q96DD7 197 aa16.46■□□□□ 0.23
GARNL3-206ENST00000439286 AK9Q5TCS8 1911 aa16.46■□□□□ 0.23
GARNL3-206ENST00000439286 IFIT2P09913 472 aaKnown RBP16.45■□□□□ 0.22
GARNL3-206ENST00000439286 USP17L2Q6R6M4 530 aa16.45■□□□□ 0.22
GARNL3-206ENST00000439286 RPAP2Q8IXW5 612 aaPredicted RBP16.45■□□□□ 0.22
GARNL3-206ENST00000439286 GTF3C2Q8WUA4 911 aaPredicted RBP16.45■□□□□ 0.22
GARNL3-206ENST00000439286 DEFB118Q96PH6 123 aa16.45■□□□□ 0.22
GARNL3-206ENST00000439286 BCL11AQ9H165 835 aa16.45■□□□□ 0.22
GARNL3-206ENST00000439286 CWC22Q9HCG8 908 aaKnown RBP16.45■□□□□ 0.22
GARNL3-206ENST00000439286 IL1RAPL2Q9NP60 686 aa16.45■□□□□ 0.22
GARNL3-206ENST00000439286 CABP5Q9NP86 173 aa16.45■□□□□ 0.22
GARNL3-206ENST00000439286 ZBTB21Q9ULJ3 1066 aa16.45■□□□□ 0.22
GARNL3-206ENST00000439286 COLQQ9Y215 455 aaPredicted RBP16.45■□□□□ 0.22
GARNL3-206ENST00000439286 MYH2Q9UKX2 1941 aa16.45■□□□□ 0.22
GARNL3-206ENST00000439286 PDE4DIPQ5VU43 2346 aa16.44■□□□□ 0.22
GARNL3-206ENST00000439286 APBB1O00213 710 aa16.44■□□□□ 0.22
GARNL3-206ENST00000439286 RHPN1Q8TCX5 695 aa16.44■□□□□ 0.22
GARNL3-206ENST00000439286 KIF1BPQ96EK5 621 aa16.44■□□□□ 0.22
GARNL3-206ENST00000439286 P2RX7Q99572 595 aaKnown RBP16.44■□□□□ 0.22
GARNL3-206ENST00000439286 FEZ1Q99689 392 aa16.44■□□□□ 0.22
GARNL3-206ENST00000439286 ANTXR1Q9H6X2 564 aa16.44■□□□□ 0.22
GARNL3-206ENST00000439286 DNAJC18Q9H819 358 aa16.44■□□□□ 0.22
GARNL3-206ENST00000439286 MORF4L1Q9UBU8 362 aa16.44■□□□□ 0.22
GARNL3-206ENST00000439286 SERPINB13Q9UIV8 391 aa16.44■□□□□ 0.22
GARNL3-206ENST00000439286 DDX19BQ9UMR2 479 aa16.44■□□□□ 0.22
GARNL3-206ENST00000439286 NDUFB9Q9Y6M9 179 aa16.44■□□□□ 0.22
GARNL3-206ENST00000439286 MAGEB6P1A0A0J9YX57 407 aa16.43■□□□□ 0.22
GARNL3-206ENST00000439286 GH2P01242 217 aa16.43■□□□□ 0.22
GARNL3-206ENST00000439286 POLR3DP05423 398 aaPredicted RBP16.43■□□□□ 0.22
GARNL3-206ENST00000439286 USP14P54578 494 aa16.43■□□□□ 0.22
GARNL3-206ENST00000439286 HERVK_113P62684 666 aa16.43■□□□□ 0.22
GARNL3-206ENST00000439286 PDE3AQ14432 1141 aa16.43■□□□□ 0.22
GARNL3-206ENST00000439286 CERKLQ49MI3 558 aaPredicted RBP16.43■□□□□ 0.22
GARNL3-206ENST00000439286 HTTP42858 3142 aa16.43■□□□□ 0.22
GARNL3-206ENST00000439286 RAB11FIP3O75154 756 aa16.42■□□□□ 0.22
GARNL3-206ENST00000439286 HMGCRP04035 888 aa16.42■□□□□ 0.22
GARNL3-206ENST00000439286 JAG1P78504 1218 aa16.42■□□□□ 0.22
GARNL3-206ENST00000439286 RAB3GAP1Q15042 981 aa16.42■□□□□ 0.22
GARNL3-206ENST00000439286 SLC9C2Q5TAH2 1124 aa16.42■□□□□ 0.22
GARNL3-206ENST00000439286 SOCS4Q8WXH5 440 aa16.42■□□□□ 0.22
GARNL3-206ENST00000439286 DNAJC2Q99543 621 aaKnown RBP16.42■□□□□ 0.22
GARNL3-206ENST00000439286 NUDT12Q9BQG2 462 aa16.42■□□□□ 0.22
GARNL3-206ENST00000439286 CRNKL1Q9BZJ0 848 aaKnown RBP16.42■□□□□ 0.22
GARNL3-206ENST00000439286 EHD4Q9H223 541 aa16.42■□□□□ 0.22
GARNL3-206ENST00000439286 HMX1Q9NP08 348 aaPredicted RBP16.42■□□□□ 0.22
GARNL3-206ENST00000439286 DOCK2Q92608 1830 aa16.42■□□□□ 0.22
GARNL3-206ENST00000439286 EVI5O60447 810 aa16.41■□□□□ 0.22
GARNL3-206ENST00000439286 CYP2B6P20813 491 aa16.41■□□□□ 0.22
GARNL3-206ENST00000439286 MAPK4P31152 587 aa16.41■□□□□ 0.22
GARNL3-206ENST00000439286 ABCB5Q2M3G0 1257 aa16.41■□□□□ 0.22
GARNL3-206ENST00000439286 TATDN1Q6P1N9 297 aa16.41■□□□□ 0.22
GARNL3-206ENST00000439286 TRMT44Q8IYL2 757 aaKnown RBP16.41■□□□□ 0.22
GARNL3-206ENST00000439286 PAGR1Q9BTK6 254 aa16.41■□□□□ 0.22
GARNL3-206ENST00000439286 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.41■□□□□ 0.22
GARNL3-206ENST00000439286 PAK6Q9NQU5 681 aaPredicted RBP16.41■□□□□ 0.22
GARNL3-206ENST00000439286 GJD2Q9UKL4 321 aa16.41■□□□□ 0.22
GARNL3-206ENST00000439286 COG6Q9Y2V7 657 aa16.41■□□□□ 0.22
GARNL3-206ENST00000439286 USP17L15C9J2P7 530 aa16.4■□□□□ 0.22
GARNL3-206ENST00000439286 USP17L13C9JLJ4 530 aa16.4■□□□□ 0.22
GARNL3-206ENST00000439286 USP17L11C9JVI0 530 aa16.4■□□□□ 0.22
GARNL3-206ENST00000439286 USP17L18D6R9N7 530 aa16.4■□□□□ 0.22
GARNL3-206ENST00000439286 USP17L22D6RA61 530 aa16.4■□□□□ 0.22
GARNL3-206ENST00000439286 USP17L17D6RBQ6 530 aa16.4■□□□□ 0.22
GARNL3-206ENST00000439286 USP17L19D6RCP7 530 aa16.4■□□□□ 0.22
GARNL3-206ENST00000439286 USP17L20D6RJB6 530 aa16.4■□□□□ 0.22
GARNL3-206ENST00000439286 USP17L24Q0WX57 530 aa16.4■□□□□ 0.22
GARNL3-206ENST00000439286 ZYXQ15942 572 aaKnown RBP16.4■□□□□ 0.22
GARNL3-206ENST00000439286 CHRDL2Q6WN34 429 aa16.4■□□□□ 0.22
GARNL3-206ENST00000439286 NECAB2Q7Z6G3 386 aa16.4■□□□□ 0.22
GARNL3-206ENST00000439286 UBE2Q1Q7Z7E8 422 aa16.4■□□□□ 0.22
GARNL3-206ENST00000439286 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.4■□□□□ 0.22
GARNL3-206ENST00000439286 EMILIN3Q9NT22 766 aa16.4■□□□□ 0.22
GARNL3-206ENST00000439286 RPTORQ8N122 1335 aa16.4■□□□□ 0.22
GARNL3-206ENST00000439286 GOLIM4O00461 696 aa16.39■□□□□ 0.21
GARNL3-206ENST00000439286 GLRX3O76003 335 aaKnown RBP16.39■□□□□ 0.21
GARNL3-206ENST00000439286 PDE6AP16499 860 aa16.39■□□□□ 0.21
GARNL3-206ENST00000439286 ERVK-9P63128 1117 aa16.39■□□□□ 0.21
GARNL3-206ENST00000439286 ERVK-24P63145 666 aa16.39■□□□□ 0.21
GARNL3-206ENST00000439286 CCNA1P78396 465 aa16.39■□□□□ 0.21
GARNL3-206ENST00000439286 SHROOM1Q2M3G4 852 aaPredicted RBP16.39■□□□□ 0.21
GARNL3-206ENST00000439286 RIOK1Q9BRS2 568 aaKnown RBP16.39■□□□□ 0.21
GARNL3-206ENST00000439286 CRISPLD2Q9H0B8 497 aa16.39■□□□□ 0.21
GARNL3-206ENST00000439286 MCM9Q9NXL9 1143 aa16.39■□□□□ 0.21
GARNL3-206ENST00000439286 RBPJLQ9UBG7 517 aa16.39■□□□□ 0.21
GARNL3-206ENST00000439286 RBBP6Q7Z6E9 1792 aaKnown RBP16.38■□□□□ 0.21
GARNL3-206ENST00000439286 DOCK1Q14185 1865 aa16.38■□□□□ 0.21
GARNL3-206ENST00000439286 MPHOSPH10O00566 681 aaKnown RBP16.38■□□□□ 0.21
GARNL3-206ENST00000439286 XRCC5P13010 732 aaKnown RBP16.38■□□□□ 0.21
GARNL3-206ENST00000439286 RGS2P41220 211 aa16.38■□□□□ 0.21
GARNL3-206ENST00000439286 PLEKHH3Q7Z736 793 aa16.38■□□□□ 0.21
GARNL3-206ENST00000439286 ANKLE1Q8NAG6 615 aa16.38■□□□□ 0.21
GARNL3-206ENST00000439286 PAWRQ96IZ0 340 aaKnown RBP16.38■□□□□ 0.21
GARNL3-206ENST00000439286 C12orf42Q96LP6 360 aa16.38■□□□□ 0.21
GARNL3-206ENST00000439286 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.38■□□□□ 0.21
GARNL3-206ENST00000439286 KIAA1683Q9H0B3 1180 aa16.38■□□□□ 0.21
GARNL3-206ENST00000439286 TXNRD2Q9NNW7 524 aa16.38■□□□□ 0.21
GARNL3-206ENST00000439286 ZBTB40Q9NUA8 1239 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms