RNA–Protein interactions for RNA: ENST00000439068.6

LSMEM1-202, Transcript of leucine rich single-pass membrane protein 1, humanhuman

APPRIS P1 TSL 3 BASIC

Gene LSMEM1, Length 730 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-202ENST00000439068 ZIC5Q96T25 663 aa11.32□□□□□ -0.6
LSMEM1-202ENST00000439068 ESYT1Q9BSJ8 1104 aa11.32□□□□□ -0.6
LSMEM1-202ENST00000439068 HDAC9Q9UKV0 1011 aa11.32□□□□□ -0.6
LSMEM1-202ENST00000439068 SHTN1A0MZ66 631 aa11.31□□□□□ -0.6
LSMEM1-202ENST00000439068 FAM155AB1AL88 458 aaPredicted RBP11.31□□□□□ -0.6
LSMEM1-202ENST00000439068 PPP1R12BO60237 982 aaPredicted RBP11.31□□□□□ -0.6
LSMEM1-202ENST00000439068 ECE2O60344 883 aa11.31□□□□□ -0.6
LSMEM1-202ENST00000439068 ANXA1P04083 346 aa11.31□□□□□ -0.6
LSMEM1-202ENST00000439068 RPS8P62241 208 aaKnown RBP11.31□□□□□ -0.6
LSMEM1-202ENST00000439068 FKBP1BP68106 108 aa11.31□□□□□ -0.6
LSMEM1-202ENST00000439068 SF3B3Q15393 1217 aaKnown RBP11.31□□□□□ -0.6
LSMEM1-202ENST00000439068 TLR1Q15399 786 aa11.31□□□□□ -0.6
LSMEM1-202ENST00000439068 CCDC27Q2M243 656 aa11.31□□□□□ -0.6
LSMEM1-202ENST00000439068 KIF4BQ2VIQ3 1234 aa11.31□□□□□ -0.6
LSMEM1-202ENST00000439068 FOXD4L5Q5VV16 416 aaPredicted RBP11.31□□□□□ -0.6
LSMEM1-202ENST00000439068 LRP10Q7Z4F1 713 aa11.31□□□□□ -0.6
LSMEM1-202ENST00000439068 FOXD4L4Q8WXT5 416 aaPredicted RBP11.31□□□□□ -0.6
LSMEM1-202ENST00000439068 CSRNP1Q96S65 589 aa11.31□□□□□ -0.6
LSMEM1-202ENST00000439068 DNMT3AQ9Y6K1 912 aaPredicted RBP11.31□□□□□ -0.6
LSMEM1-202ENST00000439068 VIL1P09327 827 aaKnown RBP11.3□□□□□ -0.6
LSMEM1-202ENST00000439068 SOX10P56693 466 aa11.3□□□□□ -0.6
LSMEM1-202ENST00000439068 CENPCQ03188 943 aa11.3□□□□□ -0.6
LSMEM1-202ENST00000439068 CLN3Q13286 438 aa11.3□□□□□ -0.6
LSMEM1-202ENST00000439068 MTFR1Q15390 333 aa11.3□□□□□ -0.6
LSMEM1-202ENST00000439068 PROSER3Q2NL68 480 aa11.3□□□□□ -0.6
LSMEM1-202ENST00000439068 PLBD2Q8NHP8 589 aa11.3□□□□□ -0.6
LSMEM1-202ENST00000439068 FAM89AQ96GI7 184 aa11.3□□□□□ -0.6
LSMEM1-202ENST00000439068 ANKIB1Q9P2G1 1089 aa11.3□□□□□ -0.6
LSMEM1-202ENST00000439068 POLLQ9UGP5 575 aa11.3□□□□□ -0.6
LSMEM1-202ENST00000439068 LAMB4A4D0S4 1761 aa11.29□□□□□ -0.6
LSMEM1-202ENST00000439068 ADM5C9JUS6 153 aa11.29□□□□□ -0.6
LSMEM1-202ENST00000439068 GPSM2P81274 684 aa11.29□□□□□ -0.6
LSMEM1-202ENST00000439068 DLK2Q6UY11 383 aa11.29□□□□□ -0.6
LSMEM1-202ENST00000439068 AGBL3Q8NEM8 1001 aa11.29□□□□□ -0.6
LSMEM1-202ENST00000439068 LAS1LQ9Y4W2 734 aaKnown RBP11.29□□□□□ -0.6
LSMEM1-202ENST00000439068 PDE4DIPQ5VU43 2346 aa11.28□□□□□ -0.6
LSMEM1-202ENST00000439068 PRR20EP86478 221 aa11.28□□□□□ -0.6
LSMEM1-202ENST00000439068 PRR20CP86479 221 aa11.28□□□□□ -0.6
LSMEM1-202ENST00000439068 PRR20DP86480 221 aa11.28□□□□□ -0.6
LSMEM1-202ENST00000439068 PRR20BP86481 221 aa11.28□□□□□ -0.6
LSMEM1-202ENST00000439068 PRR20AP86496 221 aa11.28□□□□□ -0.6
LSMEM1-202ENST00000439068 SCARF1Q14162 830 aa11.28□□□□□ -0.6
LSMEM1-202ENST00000439068 TBC1D16Q8TBP0 767 aa11.28□□□□□ -0.6
LSMEM1-202ENST00000439068 CELF1Q92879 486 aaKnown RBP11.28□□□□□ -0.6
LSMEM1-202ENST00000439068 CDCA5Q96FF9 252 aa11.28□□□□□ -0.6
LSMEM1-202ENST00000439068 SAP130Q9H0E3 1048 aa11.28□□□□□ -0.6
LSMEM1-202ENST00000439068 HYPKQ9NX55 129 aa11.28□□□□□ -0.6
LSMEM1-202ENST00000439068 GGA3Q9NZ52 723 aa11.28□□□□□ -0.6
LSMEM1-202ENST00000439068 DBF4Q9UBU7 674 aaPredicted RBP11.28□□□□□ -0.6
LSMEM1-202ENST00000439068 GGA1Q9UJY5 639 aa11.28□□□□□ -0.6
LSMEM1-202ENST00000439068 IQSEC3Q9UPP2 1182 aaPredicted RBP11.28□□□□□ -0.6
LSMEM1-202ENST00000439068 CDK2AP1O14519 115 aa11.27□□□□□ -0.61
LSMEM1-202ENST00000439068 IRS4O14654 1257 aaPredicted RBP11.27□□□□□ -0.61
LSMEM1-202ENST00000439068 EGFRP00533 1210 aa11.27□□□□□ -0.61
LSMEM1-202ENST00000439068 NF2P35240 595 aa11.27□□□□□ -0.61
LSMEM1-202ENST00000439068 TMPOP42166 694 aaKnown RBP11.27□□□□□ -0.61
LSMEM1-202ENST00000439068 TRIM28Q13263 835 aaKnown RBP11.27□□□□□ -0.61
LSMEM1-202ENST00000439068 SH3PXD2AQ5TCZ1 1133 aa11.27□□□□□ -0.61
LSMEM1-202ENST00000439068 KCNQ5Q9NR82 932 aa11.27□□□□□ -0.61
LSMEM1-202ENST00000439068 BIN2Q9UBW5 565 aaPredicted RBP11.27□□□□□ -0.61
LSMEM1-202ENST00000439068 H3BRB1 525 aa11.26□□□□□ -0.61
LSMEM1-202ENST00000439068 ICMTO60725 284 aa11.26□□□□□ -0.61
LSMEM1-202ENST00000439068 UFL1O94874 794 aa11.26□□□□□ -0.61
LSMEM1-202ENST00000439068 HOXB7P09629 217 aa11.26□□□□□ -0.61
LSMEM1-202ENST00000439068 CCDC152Q4G0S7 254 aa11.26□□□□□ -0.61
LSMEM1-202ENST00000439068 ANGEL2Q5VTE6 544 aaKnown RBP11.26□□□□□ -0.61
LSMEM1-202ENST00000439068 GCC1Q96CN9 775 aa11.26□□□□□ -0.61
LSMEM1-202ENST00000439068 ISCA1Q9BUE6 129 aa11.26□□□□□ -0.61
LSMEM1-202ENST00000439068 CHMP4AQ9BY43 222 aa11.26□□□□□ -0.61
LSMEM1-202ENST00000439068 TUT1Q9H6E5 874 aaKnown RBP11.26□□□□□ -0.61
LSMEM1-202ENST00000439068 CHPF2Q9P2E5 772 aa11.26□□□□□ -0.61
LSMEM1-202ENST00000439068 CHL1O00533 1208 aa11.25□□□□□ -0.61
LSMEM1-202ENST00000439068 ZNF280AP59817 542 aaPredicted RBP11.25□□□□□ -0.61
LSMEM1-202ENST00000439068 PODNQ7Z5L7 613 aa11.25□□□□□ -0.61
LSMEM1-202ENST00000439068 MEIOBQ8N635 442 aa11.25□□□□□ -0.61
LSMEM1-202ENST00000439068 ZBTB38Q8NAP3 1195 aaPredicted RBP11.25□□□□□ -0.61
LSMEM1-202ENST00000439068 ZDHHC1Q8WTX9 485 aa11.25□□□□□ -0.61
LSMEM1-202ENST00000439068 VTI1AQ96AJ9 217 aa11.25□□□□□ -0.61
LSMEM1-202ENST00000439068 ZNF428Q96B54 188 aa11.25□□□□□ -0.61
LSMEM1-202ENST00000439068 C2orf49Q9BVC5 232 aaPredicted RBP11.25□□□□□ -0.61
LSMEM1-202ENST00000439068 MYOZ2Q9NPC6 264 aa11.25□□□□□ -0.61
LSMEM1-202ENST00000439068 PITPNM2Q9BZ72 1349 aa11.25□□□□□ -0.61
LSMEM1-202ENST00000439068 KDM3BQ7LBC6 1761 aa11.25□□□□□ -0.61
LSMEM1-202ENST00000439068 TBC1D8O95759 1140 aa11.24□□□□□ -0.61
LSMEM1-202ENST00000439068 MMP14P50281 582 aa11.24□□□□□ -0.61
LSMEM1-202ENST00000439068 SREBF2Q12772 1141 aa11.24□□□□□ -0.61
LSMEM1-202ENST00000439068 ECM1Q16610 540 aa11.24□□□□□ -0.61
LSMEM1-202ENST00000439068 RASAL3Q86YV0 1011 aa11.24□□□□□ -0.61
LSMEM1-202ENST00000439068 INSM2Q96T92 566 aaPredicted RBP11.24□□□□□ -0.61
LSMEM1-202ENST00000439068 EGFL7Q9UHF1 273 aa11.24□□□□□ -0.61
LSMEM1-202ENST00000439068 RTL9Q8NET4 1388 aa11.24□□□□□ -0.61
LSMEM1-202ENST00000439068 UBE2Q2LH0YL09 131 aa11.23□□□□□ -0.61
LSMEM1-202ENST00000439068 TM4SF4P48230 202 aa11.23□□□□□ -0.61
LSMEM1-202ENST00000439068 PSMA6P60900 246 aaKnown RBP11.23□□□□□ -0.61
LSMEM1-202ENST00000439068 NOM1Q5C9Z4 860 aaKnown RBP11.23□□□□□ -0.61
LSMEM1-202ENST00000439068 ARMC9Q7Z3E5 817 aa11.23□□□□□ -0.61
LSMEM1-202ENST00000439068 ANKRD18AQ8IVF6 992 aa11.23□□□□□ -0.61
LSMEM1-202ENST00000439068 ZNF295-AS1Q8N0V1 137 aa11.23□□□□□ -0.61
LSMEM1-202ENST00000439068 ZNF296Q8WUU4 475 aaPredicted RBP11.23□□□□□ -0.61
LSMEM1-202ENST00000439068 HCN4Q9Y3Q4 1203 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms