RNA–Protein interactions for RNA: ENST00000439029.5

SMPD4-208, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 4

Gene SMPD4, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-208ENST00000439029 MAP2K5Q13163 448 aa12.2□□□□□ -0.46
SMPD4-208ENST00000439029 IL27Q8NEV9 243 aa12.2□□□□□ -0.46
SMPD4-208ENST00000439029 SRCIN1Q9C0H9 1055 aa12.2□□□□□ -0.46
SMPD4-208ENST00000439029 PRDM12Q9H4Q4 367 aa12.2□□□□□ -0.46
SMPD4-208ENST00000439029 TMOD4Q9NZQ9 345 aa12.2□□□□□ -0.46
SMPD4-208ENST00000439029 CAP2P40123 477 aa12.19□□□□□ -0.46
SMPD4-208ENST00000439029 SHROOM1Q2M3G4 852 aaPredicted RBP12.19□□□□□ -0.46
SMPD4-208ENST00000439029 SH3D19Q5HYK7 790 aa12.19□□□□□ -0.46
SMPD4-208ENST00000439029 TIFAQ96CG3 184 aa12.19□□□□□ -0.46
SMPD4-208ENST00000439029 EDC3Q96F86 508 aaKnown RBP12.19□□□□□ -0.46
SMPD4-208ENST00000439029 OSBPL5Q9H0X9 879 aaPredicted RBP12.19□□□□□ -0.46
SMPD4-208ENST00000439029 RLFQ13129 1914 aa12.19□□□□□ -0.46
SMPD4-208ENST00000439029 GAKO14976 1311 aa12.18□□□□□ -0.46
SMPD4-208ENST00000439029 BDP1A6H8Y1 2624 aa12.18□□□□□ -0.46
SMPD4-208ENST00000439029 GRXCR1A8MXD5 290 aa12.18□□□□□ -0.46
SMPD4-208ENST00000439029 TBC1D12O60347 775 aa12.18□□□□□ -0.46
SMPD4-208ENST00000439029 ALDH1L1O75891 902 aa12.18□□□□□ -0.46
SMPD4-208ENST00000439029 PBX2P40425 430 aa12.18□□□□□ -0.46
SMPD4-208ENST00000439029 ADCYAP1R1P41586 468 aa12.18□□□□□ -0.46
SMPD4-208ENST00000439029 PHKA1P46020 1223 aa12.18□□□□□ -0.46
SMPD4-208ENST00000439029 JAG1P78504 1218 aa12.18□□□□□ -0.46
SMPD4-208ENST00000439029 ATP2B2Q01814 1243 aa12.18□□□□□ -0.46
SMPD4-208ENST00000439029 TLE2Q04725 743 aa12.18□□□□□ -0.46
SMPD4-208ENST00000439029 DZIP1Q86YF9 867 aaKnown RBP12.18□□□□□ -0.46
SMPD4-208ENST00000439029 LPIN2Q92539 896 aa12.18□□□□□ -0.46
SMPD4-208ENST00000439029 GAS2L1Q99501 681 aaPredicted RBP12.18□□□□□ -0.46
SMPD4-208ENST00000439029 C1QTNF1Q9BXJ1 281 aa12.18□□□□□ -0.46
SMPD4-208ENST00000439029 ABCF2Q9UG63 623 aa12.18□□□□□ -0.46
SMPD4-208ENST00000439029 ATAD5Q96QE3 1844 aa12.18□□□□□ -0.46
SMPD4-208ENST00000439029 KIF16BQ96L93 1317 aa12.17□□□□□ -0.46
SMPD4-208ENST00000439029 FANCIQ9NVI1 1328 aa12.17□□□□□ -0.46
SMPD4-208ENST00000439029 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.17□□□□□ -0.46
SMPD4-208ENST00000439029 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.17□□□□□ -0.46
SMPD4-208ENST00000439029 KBTBD13C9JR72 458 aa12.17□□□□□ -0.46
SMPD4-208ENST00000439029 IGFBP4P22692 258 aa12.17□□□□□ -0.46
SMPD4-208ENST00000439029 HOXA7P31268 230 aaPredicted RBP12.17□□□□□ -0.46
SMPD4-208ENST00000439029 BACE1P56817 501 aa12.17□□□□□ -0.46
SMPD4-208ENST00000439029 EXOSC9Q06265 439 aaKnown RBP12.17□□□□□ -0.46
SMPD4-208ENST00000439029 ADGRE1Q14246 886 aa12.17□□□□□ -0.46
SMPD4-208ENST00000439029 RABL6Q3YEC7 729 aaPredicted RBP12.17□□□□□ -0.46
SMPD4-208ENST00000439029 ALYREFQ86V81 257 aaKnown RBP12.17□□□□□ -0.46
SMPD4-208ENST00000439029 WWC1Q8IX03 1113 aa12.17□□□□□ -0.46
SMPD4-208ENST00000439029 ARRDC4Q8NCT1 418 aa12.17□□□□□ -0.46
SMPD4-208ENST00000439029 NPLOC4Q8TAT6 608 aa12.17□□□□□ -0.46
SMPD4-208ENST00000439029 LRFN3Q9BTN0 628 aa12.17□□□□□ -0.46
SMPD4-208ENST00000439029 EPHX3Q9H6B9 360 aa12.17□□□□□ -0.46
SMPD4-208ENST00000439029 AS3MTQ9HBK9 375 aa12.17□□□□□ -0.46
SMPD4-208ENST00000439029 GNL3LQ9NVN8 582 aaKnown RBP12.17□□□□□ -0.46
SMPD4-208ENST00000439029 HCN4Q9Y3Q4 1203 aa12.17□□□□□ -0.46
SMPD4-208ENST00000439029 PIEZO1Q92508 2521 aa12.16□□□□□ -0.46
SMPD4-208ENST00000439029 UTYO14607 1347 aa12.16□□□□□ -0.46
SMPD4-208ENST00000439029 MSCO60682 206 aa12.16□□□□□ -0.46
SMPD4-208ENST00000439029 ADORA1P30542 326 aa12.16□□□□□ -0.46
SMPD4-208ENST00000439029 DDX10Q13206 875 aaKnown RBP12.16□□□□□ -0.46
SMPD4-208ENST00000439029 CACNA1FO60840 1977 aa12.16□□□□□ -0.46
SMPD4-208ENST00000439029 SYNGAP1Q96PV0 1343 aa12.15□□□□□ -0.46
SMPD4-208ENST00000439029 SALL1Q9NSC2 1324 aa12.15□□□□□ -0.46
SMPD4-208ENST00000439029 MUC6Q6W4X9 2439 aa12.15□□□□□ -0.46
SMPD4-208ENST00000439029 EYA2O00167 538 aa12.15□□□□□ -0.46
SMPD4-208ENST00000439029 CNMDO75829 334 aa12.15□□□□□ -0.46
SMPD4-208ENST00000439029 RAG1P15918 1043 aa12.15□□□□□ -0.46
SMPD4-208ENST00000439029 RHBDL3P58872 404 aa12.15□□□□□ -0.46
SMPD4-208ENST00000439029 TFF2Q03403 129 aa12.15□□□□□ -0.46
SMPD4-208ENST00000439029 FPGSQ05932 587 aa12.15□□□□□ -0.46
SMPD4-208ENST00000439029 SNX17Q15036 470 aa12.15□□□□□ -0.46
SMPD4-208ENST00000439029 ATP2B3Q16720 1220 aa12.15□□□□□ -0.46
SMPD4-208ENST00000439029 PRAMEF19Q5SWL8 479 aa12.15□□□□□ -0.46
SMPD4-208ENST00000439029 CCDC129Q6ZRS4 1044 aa12.15□□□□□ -0.46
SMPD4-208ENST00000439029 MICALL1Q8N3F8 863 aa12.15□□□□□ -0.46
SMPD4-208ENST00000439029 TBC1D2Q9BYX2 928 aa12.15□□□□□ -0.46
SMPD4-208ENST00000439029 SIL1Q9H173 461 aa12.15□□□□□ -0.46
SMPD4-208ENST00000439029 DENND2AQ9ULE3 1009 aa12.15□□□□□ -0.46
SMPD4-208ENST00000439029 SALL2Q9Y467 1007 aaPredicted RBP12.15□□□□□ -0.46
SMPD4-208ENST00000439029 MROH7-TTC4A0A0A0MT08 1334 aa12.14□□□□□ -0.47
SMPD4-208ENST00000439029 PQBP1O60828 265 aaKnown RBP12.14□□□□□ -0.47
SMPD4-208ENST00000439029 GDF11O95390 407 aa12.14□□□□□ -0.47
SMPD4-208ENST00000439029 CLTBP09497 229 aa12.14□□□□□ -0.47
SMPD4-208ENST00000439029 CYBAP13498 195 aa12.14□□□□□ -0.47
SMPD4-208ENST00000439029 PTPREP23469 700 aa12.14□□□□□ -0.47
SMPD4-208ENST00000439029 ZYXQ15942 572 aaKnown RBP12.14□□□□□ -0.47
SMPD4-208ENST00000439029 AKNAD1Q5T1N1 836 aa12.14□□□□□ -0.47
SMPD4-208ENST00000439029 WDR18Q9BV38 432 aa12.14□□□□□ -0.47
SMPD4-208ENST00000439029 PBX4Q9BYU1 374 aa12.14□□□□□ -0.47
SMPD4-208ENST00000439029 EMILIN3Q9NT22 766 aa12.14□□□□□ -0.47
SMPD4-208ENST00000439029 PLXNA1Q9UIW2 1896 aa12.13□□□□□ -0.47
SMPD4-208ENST00000439029 GPR75-ASB3A0A0A6YYF3 556 aa12.13□□□□□ -0.47
SMPD4-208ENST00000439029 FAM86C2PA6NEL3 165 aa12.13□□□□□ -0.47
SMPD4-208ENST00000439029 SLC15A5A6NIM6 579 aa12.13□□□□□ -0.47
SMPD4-208ENST00000439029 GLRX3O76003 335 aaKnown RBP12.13□□□□□ -0.47
SMPD4-208ENST00000439029 RFX5P48382 616 aaPredicted RBP12.13□□□□□ -0.47
SMPD4-208ENST00000439029 KCNQ1P51787 676 aa12.13□□□□□ -0.47
SMPD4-208ENST00000439029 MECOMQ03112 1051 aa12.13□□□□□ -0.47
SMPD4-208ENST00000439029 LRRC41Q15345 812 aa12.13□□□□□ -0.47
SMPD4-208ENST00000439029 ATG9AQ7Z3C6 839 aa12.13□□□□□ -0.47
SMPD4-208ENST00000439029 ZNF384Q8TF68 577 aa12.13□□□□□ -0.47
SMPD4-208ENST00000439029 TACC3Q9Y6A5 838 aa12.13□□□□□ -0.47
SMPD4-208ENST00000439029 C19orf81C9J6K1 198 aa12.12□□□□□ -0.47
SMPD4-208ENST00000439029 USP17L10C9JJH3 530 aa12.12□□□□□ -0.47
SMPD4-208ENST00000439029 BMP1P13497 986 aa12.12□□□□□ -0.47
SMPD4-208ENST00000439029 RASGRF1Q13972 1273 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 111.7 ms