RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 NOL9Q5SY16 702 aaKnown RBP21.76■■□□□ 1.07
HDAC6-208ENST00000438518 DLK2Q6UY11 383 aa21.76■■□□□ 1.07
HDAC6-208ENST00000438518 SLC44A5Q8NCS7 719 aa21.76■■□□□ 1.07
HDAC6-208ENST00000438518 IL17RAQ96F46 866 aa21.76■■□□□ 1.07
HDAC6-208ENST00000438518 CABP5Q9NP86 173 aa21.76■■□□□ 1.07
HDAC6-208ENST00000438518 FAM196BA6NMK8 535 aa21.75■■□□□ 1.07
HDAC6-208ENST00000438518 SMIM22K7EJ46 135 aa21.75■■□□□ 1.07
HDAC6-208ENST00000438518 PSMA5P28066 241 aa21.75■■□□□ 1.07
HDAC6-208ENST00000438518 RBM25P49756 843 aaKnown RBP21.75■■□□□ 1.07
HDAC6-208ENST00000438518 MAP3K9P80192 1104 aa21.75■■□□□ 1.07
HDAC6-208ENST00000438518 TMEM179Q6ZVK1 233 aa21.75■■□□□ 1.07
HDAC6-208ENST00000438518 TBC1D2Q9BYX2 928 aa21.75■■□□□ 1.07
HDAC6-208ENST00000438518 C22orf23Q9BZE7 217 aa21.75■■□□□ 1.07
HDAC6-208ENST00000438518 TOMM22Q9NS69 142 aa21.75■■□□□ 1.07
HDAC6-208ENST00000438518 SNX14Q9Y5W7 946 aa21.75■■□□□ 1.07
HDAC6-208ENST00000438518 CSADQ9Y600 493 aa21.75■■□□□ 1.07
HDAC6-208ENST00000438518 NEDD4P46934 1319 aa21.75■■□□□ 1.07
HDAC6-208ENST00000438518 TSPY2A6NKD2 308 aa21.74■■□□□ 1.07
HDAC6-208ENST00000438518 ABCB5Q2M3G0 1257 aa21.74■■□□□ 1.07
HDAC6-208ENST00000438518 CST9Q5W186 159 aa21.74■■□□□ 1.07
HDAC6-208ENST00000438518 SCYL3Q8IZE3 742 aa21.74■■□□□ 1.07
HDAC6-208ENST00000438518 IL27Q8NEV9 243 aa21.74■■□□□ 1.07
HDAC6-208ENST00000438518 MTA3Q9BTC8 594 aa21.74■■□□□ 1.07
HDAC6-208ENST00000438518 RANBP6O60518 1105 aaKnown RBP21.73■■□□□ 1.07
HDAC6-208ENST00000438518 TSPY3P0CV98 308 aa21.73■■□□□ 1.07
HDAC6-208ENST00000438518 TSPY8P0CW00 308 aa21.73■■□□□ 1.07
HDAC6-208ENST00000438518 CCDC178Q5BJE1 867 aa21.73■■□□□ 1.07
HDAC6-208ENST00000438518 LDLRAD1Q5T700 205 aa21.73■■□□□ 1.07
HDAC6-208ENST00000438518 RASEFQ8IZ41 740 aa21.73■■□□□ 1.07
HDAC6-208ENST00000438518 STK11IPQ8N1F8 1099 aa21.73■■□□□ 1.07
HDAC6-208ENST00000438518 NEDD1Q8NHV4 660 aa21.73■■□□□ 1.07
HDAC6-208ENST00000438518 NEK1Q96PY6 1258 aa21.73■■□□□ 1.07
HDAC6-208ENST00000438518 TM6SF1Q9BZW5 370 aa21.73■■□□□ 1.07
HDAC6-208ENST00000438518 WDR19Q8NEZ3 1342 aa21.73■■□□□ 1.07
HDAC6-208ENST00000438518 TMEM88BA6NKF7 163 aa21.72■■□□□ 1.07
HDAC6-208ENST00000438518 PRDM1O75626 825 aa21.72■■□□□ 1.07
HDAC6-208ENST00000438518 FMR1Q06787 632 aaKnown RBP eCLIP21.72■■□□□ 1.07
HDAC6-208ENST00000438518 PRKG1Q13976 671 aa21.72■■□□□ 1.07
HDAC6-208ENST00000438518 RRP12Q5JTH9 1297 aaKnown RBP21.72■■□□□ 1.07
HDAC6-208ENST00000438518 STOX1Q6ZVD7 989 aa21.72■■□□□ 1.07
HDAC6-208ENST00000438518 IQCA1Q86XH1 822 aa21.72■■□□□ 1.07
HDAC6-208ENST00000438518 HHIPL1Q96JK4 782 aa21.72■■□□□ 1.07
HDAC6-208ENST00000438518 PICK1Q9NRD5 415 aa21.72■■□□□ 1.07
HDAC6-208ENST00000438518 TCP11L1Q9NUJ3 509 aa21.72■■□□□ 1.07
HDAC6-208ENST00000438518 ZBTB21Q9ULJ3 1066 aa21.72■■□□□ 1.07
HDAC6-208ENST00000438518 B4E1Z4 1266 aa21.71■■□□□ 1.07
HDAC6-208ENST00000438518 SLURP2P0DP57 97 aa21.71■■□□□ 1.07
HDAC6-208ENST00000438518 INPP5BP32019 993 aa21.71■■□□□ 1.07
HDAC6-208ENST00000438518 TFAP4Q01664 338 aa21.71■■□□□ 1.07
HDAC6-208ENST00000438518 PPP1R3FQ6ZSY5 799 aaPredicted RBP21.71■■□□□ 1.07
HDAC6-208ENST00000438518 TACC3Q9Y6A5 838 aa21.71■■□□□ 1.07
HDAC6-208ENST00000438518 MPHOSPH10O00566 681 aaKnown RBP21.7■■□□□ 1.06
HDAC6-208ENST00000438518 KDM4AO75164 1064 aa21.7■■□□□ 1.06
HDAC6-208ENST00000438518 AKR1B1P15121 316 aa21.7■■□□□ 1.06
HDAC6-208ENST00000438518 MCM5P33992 734 aa21.7■■□□□ 1.06
HDAC6-208ENST00000438518 APLP1P51693 650 aa21.7■■□□□ 1.06
HDAC6-208ENST00000438518 VGLL4Q14135 290 aa21.7■■□□□ 1.06
HDAC6-208ENST00000438518 MB21D2Q8IYB1 491 aaPredicted RBP21.7■■□□□ 1.06
HDAC6-208ENST00000438518 TBC1D32Q96NH3 1257 aa21.7■■□□□ 1.06
HDAC6-208ENST00000438518 KANSL2Q9H9L4 492 aa21.7■■□□□ 1.06
HDAC6-208ENST00000438518 AS3MTQ9HBK9 375 aa21.7■■□□□ 1.06
HDAC6-208ENST00000438518 TAF6LQ9Y6J9 622 aa21.7■■□□□ 1.06
HDAC6-208ENST00000438518 TLL2Q9Y6L7 1015 aa21.7■■□□□ 1.06
HDAC6-208ENST00000438518 PHIPQ8WWQ0 1821 aa21.69■■□□□ 1.06
HDAC6-208ENST00000438518 GDF11O95390 407 aa21.69■■□□□ 1.06
HDAC6-208ENST00000438518 GH2P01242 217 aa21.69■■□□□ 1.06
HDAC6-208ENST00000438518 RRP1BQ14684 758 aaKnown RBP21.69■■□□□ 1.06
HDAC6-208ENST00000438518 SART3Q15020 963 aaKnown RBP21.69■■□□□ 1.06
HDAC6-208ENST00000438518 ZKSCAN4Q969J2 545 aaPredicted RBP21.69■■□□□ 1.06
HDAC6-208ENST00000438518 JAKMIP1Q96N16 626 aaKnown RBP21.69■■□□□ 1.06
HDAC6-208ENST00000438518 CREBZFQ9NS37 354 aa21.69■■□□□ 1.06
HDAC6-208ENST00000438518 ZSWIM5Q9P217 1185 aa21.69■■□□□ 1.06
HDAC6-208ENST00000438518 SYNPO2Q9UMS6 1093 aa21.69■■□□□ 1.06
HDAC6-208ENST00000438518 FZD1Q9UP38 647 aa21.69■■□□□ 1.06
HDAC6-208ENST00000438518 SNCAIPQ9Y6H5 919 aa21.69■■□□□ 1.06
HDAC6-208ENST00000438518 IGKV6D-41A0A0C4DH26 115 aa21.68■■□□□ 1.06
HDAC6-208ENST00000438518 UBE2Q2LH0YL09 131 aa21.68■■□□□ 1.06
HDAC6-208ENST00000438518 HUNKP57058 714 aa21.68■■□□□ 1.06
HDAC6-208ENST00000438518 BLOC1S2Q6QNY1 142 aa21.68■■□□□ 1.06
HDAC6-208ENST00000438518 DHX32Q7L7V1 743 aaKnown RBP21.68■■□□□ 1.06
HDAC6-208ENST00000438518 SAPCD2Q86UD0 394 aa21.68■■□□□ 1.06
HDAC6-208ENST00000438518 ERO1BQ86YB8 467 aa21.68■■□□□ 1.06
HDAC6-208ENST00000438518 TMEM87BQ96K49 555 aa21.68■■□□□ 1.06
HDAC6-208ENST00000438518 TTC14Q96N46 770 aa21.68■■□□□ 1.06
HDAC6-208ENST00000438518 UBAC1Q9BSL1 405 aa21.68■■□□□ 1.06
HDAC6-208ENST00000438518 INCENPQ9NQS7 918 aa21.68■■□□□ 1.06
HDAC6-208ENST00000438518 ERICH2A1L162 156 aa21.67■■□□□ 1.06
HDAC6-208ENST00000438518 SPDYE5A6NIY4 337 aa21.67■■□□□ 1.06
HDAC6-208ENST00000438518 USP17L5A8MUK1 530 aa21.67■■□□□ 1.06
HDAC6-208ENST00000438518 NOVP48745 357 aa21.67■■□□□ 1.06
HDAC6-208ENST00000438518 PPATQ06203 517 aa21.67■■□□□ 1.06
HDAC6-208ENST00000438518 ADCK5Q3MIX3 580 aa21.67■■□□□ 1.06
HDAC6-208ENST00000438518 FAM47AQ5JRC9 791 aa21.67■■□□□ 1.06
HDAC6-208ENST00000438518 MOB2Q70IA6 237 aa21.67■■□□□ 1.06
HDAC6-208ENST00000438518 SH2D4AQ9H788 454 aa21.67■■□□□ 1.06
HDAC6-208ENST00000438518 ZSWIM6Q9HCJ5 1215 aa21.67■■□□□ 1.06
HDAC6-208ENST00000438518 MYH4Q9Y623 1939 aa21.67■■□□□ 1.06
HDAC6-208ENST00000438518 PTPRAP18433 802 aa21.66■■□□□ 1.06
HDAC6-208ENST00000438518 ICA1Q05084 483 aa21.66■■□□□ 1.06
HDAC6-208ENST00000438518 RAB3GAP1Q15042 981 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms