RNA–Protein interactions for RNA: ENST00000437995.1

SURF1-202, Transcript of SURF1, cytochrome c oxidase assembly factor, humanhuman

TSL 5

Gene SURF1, Length 813 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SURF1-202ENST00000437995 GPAT2Q6NUI2 795 aa23.47■■□□□ 1.35
SURF1-202ENST00000437995 TATDN1Q6P1N9 297 aa23.47■■□□□ 1.35
SURF1-202ENST00000437995 GADL1Q6ZQY3 521 aa23.47■■□□□ 1.35
SURF1-202ENST00000437995 CHD1LQ86WJ1 897 aa23.47■■□□□ 1.35
SURF1-202ENST00000437995 OSBP2Q969R2 916 aa23.47■■□□□ 1.35
SURF1-202ENST00000437995 DDRGK1Q96HY6 314 aa23.47■■□□□ 1.35
SURF1-202ENST00000437995 ZBTB21Q9ULJ3 1066 aa23.47■■□□□ 1.35
SURF1-202ENST00000437995 TLR2O60603 784 aa23.46■■□□□ 1.35
SURF1-202ENST00000437995 SP3Q02447 781 aa23.46■■□□□ 1.35
SURF1-202ENST00000437995 GABPAQ06546 454 aa23.46■■□□□ 1.35
SURF1-202ENST00000437995 ERO1AQ96HE7 468 aa23.46■■□□□ 1.35
SURF1-202ENST00000437995 STRBPQ96SI9 672 aaKnown RBP23.46■■□□□ 1.35
SURF1-202ENST00000437995 BAZ2AQ9UIF9 1905 aaKnown RBP23.45■■□□□ 1.35
SURF1-202ENST00000437995 CYP2D6P10635 497 aa23.45■■□□□ 1.34
SURF1-202ENST00000437995 SHMT1P34896 483 aa23.45■■□□□ 1.34
SURF1-202ENST00000437995 SHROOM1Q2M3G4 852 aaPredicted RBP23.45■■□□□ 1.34
SURF1-202ENST00000437995 WDR18Q9BV38 432 aa23.45■■□□□ 1.34
SURF1-202ENST00000437995 GH2P01242 217 aa23.44■■□□□ 1.34
SURF1-202ENST00000437995 EVX2Q03828 476 aa23.44■■□□□ 1.34
SURF1-202ENST00000437995 CERKLQ49MI3 558 aaPredicted RBP23.44■■□□□ 1.34
SURF1-202ENST00000437995 AMOTL1Q8IY63 956 aa23.44■■□□□ 1.34
SURF1-202ENST00000437995 PARK7Q99497 189 aaKnown RBP23.44■■□□□ 1.34
SURF1-202ENST00000437995 TAOK2Q9UL54 1235 aa23.44■■□□□ 1.34
SURF1-202ENST00000437995 SLC45A1Q9Y2W3 748 aa23.44■■□□□ 1.34
SURF1-202ENST00000437995 GPAA1O43292 621 aa23.43■■□□□ 1.34
SURF1-202ENST00000437995 CAPN15O75808 1086 aa23.43■■□□□ 1.34
SURF1-202ENST00000437995 PKN2Q16513 984 aaKnown RBP23.43■■□□□ 1.34
SURF1-202ENST00000437995 PROCA1Q8NCQ7 364 aaPredicted RBP23.43■■□□□ 1.34
SURF1-202ENST00000437995 CD99L2Q8TCZ2 262 aa23.43■■□□□ 1.34
SURF1-202ENST00000437995 EVI5LQ96CN4 794 aa23.43■■□□□ 1.34
SURF1-202ENST00000437995 AGTPBP1Q9UPW5 1226 aa23.43■■□□□ 1.34
SURF1-202ENST00000437995 LOC285556D6RIA3 1793 aa23.42■■□□□ 1.34
SURF1-202ENST00000437995 ADGRA2Q96PE1 1338 aa23.42■■□□□ 1.34
SURF1-202ENST00000437995 USP17L12C9JPN9 530 aa23.42■■□□□ 1.34
SURF1-202ENST00000437995 USP17L21D6R901 530 aa23.42■■□□□ 1.34
SURF1-202ENST00000437995 M0R2C6 588 aa23.42■■□□□ 1.34
SURF1-202ENST00000437995 HMGCS2P54868 508 aa23.42■■□□□ 1.34
SURF1-202ENST00000437995 ABCB5Q2M3G0 1257 aa23.42■■□□□ 1.34
SURF1-202ENST00000437995 C12orf60Q5U649 245 aa23.42■■□□□ 1.34
SURF1-202ENST00000437995 SWAP70Q9UH65 585 aa23.42■■□□□ 1.34
SURF1-202ENST00000437995 GNAT2P19087 354 aa23.41■■□□□ 1.34
SURF1-202ENST00000437995 BACE1P56817 501 aa23.41■■□□□ 1.34
SURF1-202ENST00000437995 SH3D19Q5HYK7 790 aa23.41■■□□□ 1.34
SURF1-202ENST00000437995 ZMYM1Q5SVZ6 1142 aa23.41■■□□□ 1.34
SURF1-202ENST00000437995 GIMAP6Q6P9H5 292 aa23.41■■□□□ 1.34
SURF1-202ENST00000437995 CABP5Q9NP86 173 aa23.41■■□□□ 1.34
SURF1-202ENST00000437995 CYP2D7A0A087X1C5 515 aa23.4■■□□□ 1.34
SURF1-202ENST00000437995 GSG1L2A8MUP6 293 aa23.4■■□□□ 1.34
SURF1-202ENST00000437995 CYP2C8P10632 490 aa23.4■■□□□ 1.34
SURF1-202ENST00000437995 MTMR2Q13614 643 aa23.4■■□□□ 1.34
SURF1-202ENST00000437995 TREML2Q5T2D2 321 aa23.4■■□□□ 1.34
SURF1-202ENST00000437995 CTR9Q6PD62 1173 aa23.4■■□□□ 1.34
SURF1-202ENST00000437995 C17orf99Q6UX52 265 aa23.4■■□□□ 1.34
SURF1-202ENST00000437995 PLEKHM2Q8IWE5 1019 aa23.4■■□□□ 1.34
SURF1-202ENST00000437995 SLC44A5Q8NCS7 719 aa23.4■■□□□ 1.34
SURF1-202ENST00000437995 DYNLL2Q96FJ2 89 aa23.4■■□□□ 1.34
SURF1-202ENST00000437995 ARPP21Q9UBL0 812 aaPredicted RBP23.4■■□□□ 1.34
SURF1-202ENST00000437995 TRIM17Q9Y577 477 aa23.4■■□□□ 1.34
SURF1-202ENST00000437995 C19orf81C9J6K1 198 aa23.39■■□□□ 1.33
SURF1-202ENST00000437995 USP17L10C9JJH3 530 aa23.39■■□□□ 1.33
SURF1-202ENST00000437995 RAB3GAP1Q15042 981 aa23.39■■□□□ 1.33
SURF1-202ENST00000437995 OTOP1Q7RTM1 612 aa23.39■■□□□ 1.33
SURF1-202ENST00000437995 SEC62Q99442 399 aaKnown RBP23.39■■□□□ 1.33
SURF1-202ENST00000437995 OSBPL3Q9H4L5 887 aa23.39■■□□□ 1.33
SURF1-202ENST00000437995 CPA4Q9UI42 421 aa23.39■■□□□ 1.33
SURF1-202ENST00000437995 PABPC4Q13310 644 aaKnown RBP eCLIP23.38■■□□□ 1.333e-6■■■□□ 17.7
SURF1-202ENST00000437995 ARHGEF6Q15052 776 aa23.38■■□□□ 1.33
SURF1-202ENST00000437995 FBXO46Q6PJ61 603 aaPredicted RBP23.38■■□□□ 1.33
SURF1-202ENST00000437995 EFCC1Q9HA90 598 aa23.38■■□□□ 1.33
SURF1-202ENST00000437995 TMOD4Q9NZQ9 345 aa23.38■■□□□ 1.33
SURF1-202ENST00000437995 PNMA3Q9UL41 463 aa23.38■■□□□ 1.33
SURF1-202ENST00000437995 MYH8P13535 1937 aa23.37■■□□□ 1.33
SURF1-202ENST00000437995 SMIM22K7EJ46 135 aa23.37■■□□□ 1.33
SURF1-202ENST00000437995 CAP1Q01518 475 aa23.37■■□□□ 1.33
SURF1-202ENST00000437995 KIF22Q14807 665 aa23.37■■□□□ 1.33
SURF1-202ENST00000437995 SBK1Q52WX2 424 aa23.37■■□□□ 1.33
SURF1-202ENST00000437995 C16orf86Q6ZW13 317 aa23.37■■□□□ 1.33
SURF1-202ENST00000437995 TICAM2Q86XR7 235 aa23.37■■□□□ 1.33
SURF1-202ENST00000437995 EPB41L4AQ9HCS5 686 aaPredicted RBP23.37■■□□□ 1.33
SURF1-202ENST00000437995 TRIM6-TRIM34B2RNG4 842 aa23.36■■□□□ 1.33
SURF1-202ENST00000437995 MPHOSPH10O00566 681 aaKnown RBP23.36■■□□□ 1.33
SURF1-202ENST00000437995 GUCY1A2P33402 732 aa23.36■■□□□ 1.33
SURF1-202ENST00000437995 CDK8P49336 464 aa23.36■■□□□ 1.33
SURF1-202ENST00000437995 LACTBP83111 547 aaPredicted RBP23.36■■□□□ 1.33
SURF1-202ENST00000437995 SMCR8Q8TEV9 937 aaPredicted RBP23.36■■□□□ 1.33
SURF1-202ENST00000437995 CCDC85CA6NKD9 419 aa23.35■■□□□ 1.33
SURF1-202ENST00000437995 PATL2C9JE40 543 aaKnown RBP23.35■■□□□ 1.33
SURF1-202ENST00000437995 APPP05067 770 aa23.35■■□□□ 1.33
SURF1-202ENST00000437995 BCRP11274 1271 aa23.35■■□□□ 1.33
SURF1-202ENST00000437995 TDO2P48775 406 aa23.35■■□□□ 1.33
SURF1-202ENST00000437995 SEPT2Q15019 361 aa23.35■■□□□ 1.33
SURF1-202ENST00000437995 USP17L2Q6R6M4 530 aa23.35■■□□□ 1.33
SURF1-202ENST00000437995 FEZ1Q99689 392 aa23.35■■□□□ 1.33
SURF1-202ENST00000437995 HPS5Q9UPZ3 1129 aa23.35■■□□□ 1.33
SURF1-202ENST00000437995 OSBPP22059 807 aa23.34■■□□□ 1.33
SURF1-202ENST00000437995 TMEM179Q6ZVK1 233 aa23.34■■□□□ 1.33
SURF1-202ENST00000437995 IFNL3Q8IZI9 196 aa23.34■■□□□ 1.33
SURF1-202ENST00000437995 CCDC17Q96LX7 622 aa23.34■■□□□ 1.33
SURF1-202ENST00000437995 NACAP1Q9BZK3 213 aa23.34■■□□□ 1.33
SURF1-202ENST00000437995 ROBO3Q96MS0 1386 aa23.33■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms