RNA–Protein interactions for RNA: ENST00000437036.6

SKA2-202, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2 BASIC

Gene SKA2, Length 625 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-202ENST00000437036 HHIPL1Q96JK4 782 aa17.44■□□□□ 0.38
SKA2-202ENST00000437036 CNNM2Q9H8M5 875 aa17.44■□□□□ 0.38
SKA2-202ENST00000437036 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.44■□□□□ 0.38
SKA2-202ENST00000437036 SLC27A2O14975 620 aa17.43■□□□□ 0.38
SKA2-202ENST00000437036 ORC4O43929 436 aa17.43■□□□□ 0.38
SKA2-202ENST00000437036 GDF11O95390 407 aa17.43■□□□□ 0.38
SKA2-202ENST00000437036 CYP21A2P08686 494 aa17.43■□□□□ 0.38
SKA2-202ENST00000437036 NECTIN1Q15223 517 aa17.43■□□□□ 0.38
SKA2-202ENST00000437036 RANBP6O60518 1105 aaKnown RBP17.42■□□□□ 0.38
SKA2-202ENST00000437036 PRDM1O75626 825 aa17.42■□□□□ 0.38
SKA2-202ENST00000437036 GH2P01242 217 aa17.42■□□□□ 0.38
SKA2-202ENST00000437036 FGRP09769 529 aa17.42■□□□□ 0.38
SKA2-202ENST00000437036 TSPY3P0CV98 308 aa17.42■□□□□ 0.38
SKA2-202ENST00000437036 TSPY8P0CW00 308 aa17.42■□□□□ 0.38
SKA2-202ENST00000437036 HSPA6P17066 643 aa17.42■□□□□ 0.38
SKA2-202ENST00000437036 RASA1P20936 1047 aa17.42■□□□□ 0.38
SKA2-202ENST00000437036 ZNF157P51786 506 aaPredicted RBP17.42■□□□□ 0.38
SKA2-202ENST00000437036 RRP12Q5JTH9 1297 aaKnown RBP17.42■□□□□ 0.38
SKA2-202ENST00000437036 RGMBQ6NW40 437 aa17.42■□□□□ 0.38
SKA2-202ENST00000437036 TMEM179Q6ZVK1 233 aa17.42■□□□□ 0.38
SKA2-202ENST00000437036 TBC1D10CQ8IV04 446 aa17.42■□□□□ 0.38
SKA2-202ENST00000437036 ESR2Q92731 530 aa17.42■□□□□ 0.38
SKA2-202ENST00000437036 USP26Q9BXU7 913 aa17.42■□□□□ 0.38
SKA2-202ENST00000437036 TBC1D2Q9BYX2 928 aa17.42■□□□□ 0.38
SKA2-202ENST00000437036 KRT23Q9C075 422 aa17.42■□□□□ 0.38
SKA2-202ENST00000437036 ELP3Q9H9T3 547 aa17.42■□□□□ 0.38
SKA2-202ENST00000437036 ZBTB21Q9ULJ3 1066 aa17.42■□□□□ 0.38
SKA2-202ENST00000437036 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.42■□□□□ 0.38
SKA2-202ENST00000437036 LAMB1P07942 1786 aa17.42■□□□□ 0.38
SKA2-202ENST00000437036 TSPY2A6NKD2 308 aa17.41■□□□□ 0.38
SKA2-202ENST00000437036 AKR1B1P15121 316 aa17.41■□□□□ 0.38
SKA2-202ENST00000437036 KRT32Q14532 448 aa17.41■□□□□ 0.38
SKA2-202ENST00000437036 RRP1BQ14684 758 aaKnown RBP17.41■□□□□ 0.38
SKA2-202ENST00000437036 DEFB115Q30KQ5 88 aa17.41■□□□□ 0.38
SKA2-202ENST00000437036 PAXIP1Q6ZW49 1069 aaPredicted RBP17.41■□□□□ 0.38
SKA2-202ENST00000437036 RALYLQ86SE5 291 aaKnown RBP17.41■□□□□ 0.38
SKA2-202ENST00000437036 ERO1BQ86YB8 467 aa17.41■□□□□ 0.38
SKA2-202ENST00000437036 CCDC102AQ96A19 550 aa17.41■□□□□ 0.38
SKA2-202ENST00000437036 CLMNQ96JQ2 1002 aa17.41■□□□□ 0.38
SKA2-202ENST00000437036 NBPF3Q9H094 633 aa17.41■□□□□ 0.38
SKA2-202ENST00000437036 UPF2Q9HAU5 1272 aaKnown RBP17.41■□□□□ 0.38
SKA2-202ENST00000437036 SNCAIPQ9Y6H5 919 aa17.41■□□□□ 0.38
SKA2-202ENST00000437036 SIPA1L1O43166 1804 aa17.41■□□□□ 0.38
SKA2-202ENST00000437036 USP17L5A8MUK1 530 aa17.4■□□□□ 0.38
SKA2-202ENST00000437036 E7EWF7 191 aa17.4■□□□□ 0.38
SKA2-202ENST00000437036 HSPA4P34932 840 aa17.4■□□□□ 0.38
SKA2-202ENST00000437036 TFAP4Q01664 338 aa17.4■□□□□ 0.38
SKA2-202ENST00000437036 RAB3GAP1Q15042 981 aa17.4■□□□□ 0.38
SKA2-202ENST00000437036 PPP4R3BQ5MIZ7 849 aa17.4■□□□□ 0.38
SKA2-202ENST00000437036 AS3MTQ9HBK9 375 aa17.4■□□□□ 0.38
SKA2-202ENST00000437036 INCENPQ9NQS7 918 aa17.4■□□□□ 0.38
SKA2-202ENST00000437036 SPDYE5A6NIY4 337 aa17.39■□□□□ 0.37
SKA2-202ENST00000437036 RASSF10A6NK89 507 aa17.39■□□□□ 0.37
SKA2-202ENST00000437036 PTPRAP18433 802 aa17.39■□□□□ 0.37
SKA2-202ENST00000437036 ECE1P42892 770 aa17.39■□□□□ 0.37
SKA2-202ENST00000437036 PPATQ06203 517 aa17.39■□□□□ 0.37
SKA2-202ENST00000437036 FAM47AQ5JRC9 791 aa17.39■□□□□ 0.37
SKA2-202ENST00000437036 NEDD1Q8NHV4 660 aa17.39■□□□□ 0.37
SKA2-202ENST00000437036 NCOA7Q8NI08 942 aa17.39■□□□□ 0.37
SKA2-202ENST00000437036 OPTNQ96CV9 577 aa17.39■□□□□ 0.37
SKA2-202ENST00000437036 SEPT2Q15019 361 aa17.38■□□□□ 0.37
SKA2-202ENST00000437036 TSGA10IPQ3SY00 556 aa17.38■□□□□ 0.37
SKA2-202ENST00000437036 CCDC178Q5BJE1 867 aa17.38■□□□□ 0.37
SKA2-202ENST00000437036 OTUD5Q96G74 571 aa17.38■□□□□ 0.37
SKA2-202ENST00000437036 KANSL2Q9H9L4 492 aa17.38■□□□□ 0.37
SKA2-202ENST00000437036 ZHX2Q9Y6X8 837 aa17.38■□□□□ 0.37
SKA2-202ENST00000437036 NEDD4P46934 1319 aa17.38■□□□□ 0.37
SKA2-202ENST00000437036 B4E1Z4 1266 aa17.37■□□□□ 0.37
SKA2-202ENST00000437036 SEC24BO95487 1268 aa17.37■□□□□ 0.37
SKA2-202ENST00000437036 ZBTB48P10074 688 aaPredicted RBP17.37■□□□□ 0.37
SKA2-202ENST00000437036 PPIL2Q13356 520 aa17.37■□□□□ 0.37
SKA2-202ENST00000437036 IQCA1Q86XH1 822 aa17.37■□□□□ 0.37
SKA2-202ENST00000437036 RASAL3Q86YV0 1011 aa17.37■□□□□ 0.37
SKA2-202ENST00000437036 KCNB2Q92953 911 aa17.37■□□□□ 0.37
SKA2-202ENST00000437036 WNK4Q96J92 1243 aa17.37■□□□□ 0.37
SKA2-202ENST00000437036 WDR18Q9BV38 432 aa17.37■□□□□ 0.37
SKA2-202ENST00000437036 ARHGEF10LQ9HCE6 1279 aa17.37■□□□□ 0.37
SKA2-202ENST00000437036 TACC3Q9Y6A5 838 aa17.37■□□□□ 0.37
SKA2-202ENST00000437036 LAMA4Q16363 1823 aa17.37■□□□□ 0.37
SKA2-202ENST00000437036 KDM4AO75164 1064 aa17.36■□□□□ 0.37
SKA2-202ENST00000437036 SLC10A3P09131 477 aa17.36■□□□□ 0.37
SKA2-202ENST00000437036 HMGB1P09429 215 aaKnown RBP17.36■□□□□ 0.37
SKA2-202ENST00000437036 JAG1P78504 1218 aa17.36■□□□□ 0.37
SKA2-202ENST00000437036 ICA1Q05084 483 aa17.36■□□□□ 0.37
SKA2-202ENST00000437036 SPRYD7Q5W111 196 aa17.36■□□□□ 0.37
SKA2-202ENST00000437036 ZNF280CQ8ND82 737 aa17.36■□□□□ 0.37
SKA2-202ENST00000437036 NEK1Q96PY6 1258 aa17.36■□□□□ 0.37
SKA2-202ENST00000437036 SH2D4AQ9H788 454 aa17.36■□□□□ 0.37
SKA2-202ENST00000437036 PLIN4Q96Q06 1357 aa17.36■□□□□ 0.37
SKA2-202ENST00000437036 CXCL11O14625 94 aa17.35■□□□□ 0.37
SKA2-202ENST00000437036 PSMA5P28066 241 aa17.35■□□□□ 0.37
SKA2-202ENST00000437036 GUCY1A2P33402 732 aa17.35■□□□□ 0.37
SKA2-202ENST00000437036 ATP2B2Q01814 1243 aa17.35■□□□□ 0.37
SKA2-202ENST00000437036 GRM1Q13255 1194 aa17.35■□□□□ 0.37
SKA2-202ENST00000437036 SNAPC2Q13487 334 aa17.35■□□□□ 0.37
SKA2-202ENST00000437036 SART3Q15020 963 aaKnown RBP17.35■□□□□ 0.37
SKA2-202ENST00000437036 SHROOM1Q2M3G4 852 aaPredicted RBP17.35■□□□□ 0.37
SKA2-202ENST00000437036 CYP4F22Q6NT55 531 aa17.35■□□□□ 0.37
SKA2-202ENST00000437036 RASEFQ8IZ41 740 aa17.35■□□□□ 0.37
SKA2-202ENST00000437036 CNKSR2Q8WXI2 1034 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms