RNA–Protein interactions for RNA: ENST00000436976.1

HMGN1P19-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 19, humanhuman

BASIC

Gene HMGN1P19, Length 333 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P19-201ENST00000436976 SH3RF1Q7Z6J0 888 aa20.42■□□□□ 0.86
HMGN1P19-201ENST00000436976 PLEKHH3Q7Z736 793 aa20.42■□□□□ 0.86
HMGN1P19-201ENST00000436976 PRKRIP1Q9H875 184 aaPredicted RBP20.42■□□□□ 0.86
HMGN1P19-201ENST00000436976 PRDM5Q9NQX1 630 aaPredicted RBP20.42■□□□□ 0.86
HMGN1P19-201ENST00000436976 FAM163AQ96GL9 167 aaPredicted RBP20.41■□□□□ 0.86
HMGN1P19-201ENST00000436976 PDLIM7Q9NR12 457 aa20.41■□□□□ 0.86
HMGN1P19-201ENST00000436976 DENND2AQ9ULE3 1009 aa20.41■□□□□ 0.86
HMGN1P19-201ENST00000436976 FOCADQ5VW36 1801 aa20.41■□□□□ 0.86
HMGN1P19-201ENST00000436976 TRIM43BA6NCK2 446 aa20.4■□□□□ 0.86
HMGN1P19-201ENST00000436976 BACE1P56817 501 aa20.4■□□□□ 0.86
HMGN1P19-201ENST00000436976 MAP2K5Q13163 448 aa20.4■□□□□ 0.86
HMGN1P19-201ENST00000436976 SLC39A5Q6ZMH5 540 aa20.4■□□□□ 0.86
HMGN1P19-201ENST00000436976 TRPV1Q8NER1 839 aa20.4■□□□□ 0.86
HMGN1P19-201ENST00000436976 TRIM43Q96BQ3 446 aaPredicted RBP20.4■□□□□ 0.86
HMGN1P19-201ENST00000436976 CHD7Q9P2D1 2997 aa20.4■□□□□ 0.86
HMGN1P19-201ENST00000436976 MROH7-TTC4A0A0A0MT08 1334 aa20.39■□□□□ 0.85
HMGN1P19-201ENST00000436976 NPM3O75607 178 aaKnown RBP20.39■□□□□ 0.85
HMGN1P19-201ENST00000436976 ITGB8P26012 769 aa20.39■□□□□ 0.85
HMGN1P19-201ENST00000436976 EPHB4P54760 987 aa20.39■□□□□ 0.85
HMGN1P19-201ENST00000436976 JAG1P78504 1218 aa20.39■□□□□ 0.85
HMGN1P19-201ENST00000436976 SNX17Q15036 470 aa20.39■□□□□ 0.85
HMGN1P19-201ENST00000436976 TRIM60Q495X7 471 aa20.39■□□□□ 0.85
HMGN1P19-201ENST00000436976 GJC2Q5T442 439 aaPredicted RBP20.39■□□□□ 0.85
HMGN1P19-201ENST00000436976 DZIP1Q86YF9 867 aaKnown RBP20.39■□□□□ 0.85
HMGN1P19-201ENST00000436976 ZNF384Q8TF68 577 aa20.39■□□□□ 0.85
HMGN1P19-201ENST00000436976 PAGR1Q9BTK6 254 aa20.39■□□□□ 0.85
HMGN1P19-201ENST00000436976 WDR18Q9BV38 432 aa20.39■□□□□ 0.85
HMGN1P19-201ENST00000436976 AS3MTQ9HBK9 375 aa20.39■□□□□ 0.85
HMGN1P19-201ENST00000436976 GNL3LQ9NVN8 582 aaKnown RBP20.39■□□□□ 0.85
HMGN1P19-201ENST00000436976 GBF1Q92538 1859 aa20.39■□□□□ 0.85
HMGN1P19-201ENST00000436976 SEMA3EO15041 775 aa20.38■□□□□ 0.85
HMGN1P19-201ENST00000436976 CNGA1P29973 690 aa20.38■□□□□ 0.85
HMGN1P19-201ENST00000436976 ATP2B3Q16720 1220 aa20.38■□□□□ 0.85
HMGN1P19-201ENST00000436976 ADAMTS19Q8TE59 1207 aa20.38■□□□□ 0.85
HMGN1P19-201ENST00000436976 EDC3Q96F86 508 aaKnown RBP20.38■□□□□ 0.85
HMGN1P19-201ENST00000436976 NDUFB9Q9Y6M9 179 aa20.38■□□□□ 0.85
HMGN1P19-201ENST00000436976 ZNFX1Q9P2E3 1918 aaKnown RBP20.37■□□□□ 0.85
HMGN1P19-201ENST00000436976 GPR75-ASB3A0A0A6YYF3 556 aa20.37■□□□□ 0.85
HMGN1P19-201ENST00000436976 MSCO60682 206 aa20.37■□□□□ 0.85
HMGN1P19-201ENST00000436976 SHROOM1Q2M3G4 852 aaPredicted RBP20.37■□□□□ 0.85
HMGN1P19-201ENST00000436976 MFSD14CQ5VZR4 134 aa20.37■□□□□ 0.85
HMGN1P19-201ENST00000436976 RNPC3Q96LT9 517 aaKnown RBP20.37■□□□□ 0.85
HMGN1P19-201ENST00000436976 TMOD4Q9NZQ9 345 aa20.37■□□□□ 0.85
HMGN1P19-201ENST00000436976 ZBTB22O15209 634 aa20.36■□□□□ 0.85
HMGN1P19-201ENST00000436976 CNMDO75829 334 aa20.36■□□□□ 0.85
HMGN1P19-201ENST00000436976 IGHA2P01877 340 aa20.36■□□□□ 0.85
HMGN1P19-201ENST00000436976 DNAJB2P25686 324 aa20.36■□□□□ 0.85
HMGN1P19-201ENST00000436976 CYP2C19P33261 490 aa20.36■□□□□ 0.85
HMGN1P19-201ENST00000436976 CCAR1Q8IX12 1150 aaKnown RBP20.36■□□□□ 0.85
HMGN1P19-201ENST00000436976 ZGPATQ8N5A5 531 aaKnown RBP20.36■□□□□ 0.85
HMGN1P19-201ENST00000436976 ATXN2LQ8WWM7 1075 aaKnown RBP20.36■□□□□ 0.85
HMGN1P19-201ENST00000436976 ASB2Q96Q27 587 aa20.36■□□□□ 0.85
HMGN1P19-201ENST00000436976 ABCF2Q9UG63 623 aa20.36■□□□□ 0.85
HMGN1P19-201ENST00000436976 ZNF236Q9UL36 1845 aa20.35■□□□□ 0.85
HMGN1P19-201ENST00000436976 ADORA1P30542 326 aa20.35■□□□□ 0.85
HMGN1P19-201ENST00000436976 RASGRF1Q13972 1273 aa20.35■□□□□ 0.85
HMGN1P19-201ENST00000436976 NPLOC4Q8TAT6 608 aa20.35■□□□□ 0.85
HMGN1P19-201ENST00000436976 PIEZO1Q92508 2521 aa20.34■□□□□ 0.85
HMGN1P19-201ENST00000436976 CYBAP13498 195 aa20.34■□□□□ 0.85
HMGN1P19-201ENST00000436976 MECOMQ03112 1051 aa20.34■□□□□ 0.85
HMGN1P19-201ENST00000436976 SLF2Q8IX21 1173 aa20.34■□□□□ 0.85
HMGN1P19-201ENST00000436976 PPM1EQ8WY54 764 aa20.34■□□□□ 0.85
HMGN1P19-201ENST00000436976 UHRF1Q96T88 793 aaPredicted RBP20.34■□□□□ 0.85
HMGN1P19-201ENST00000436976 ZNF576Q9H609 170 aa20.34■□□□□ 0.85
HMGN1P19-201ENST00000436976 MYO5AQ9Y4I1 1855 aaKnown RBP20.33■□□□□ 0.85
HMGN1P19-201ENST00000436976 C19orf81C9J6K1 198 aa20.33■□□□□ 0.85
HMGN1P19-201ENST00000436976 HOXC6P09630 235 aa20.33■□□□□ 0.85
HMGN1P19-201ENST00000436976 ANO1Q5XXA6 986 aa20.33■□□□□ 0.85
HMGN1P19-201ENST00000436976 CCDC102BQ68D86 513 aa20.33■□□□□ 0.85
HMGN1P19-201ENST00000436976 USP44Q9H0E7 712 aa20.33■□□□□ 0.85
HMGN1P19-201ENST00000436976 SIL1Q9H173 461 aa20.33■□□□□ 0.85
HMGN1P19-201ENST00000436976 DNAJC18Q9H819 358 aa20.33■□□□□ 0.85
HMGN1P19-201ENST00000436976 THEGQ9P2T0 379 aa20.33■□□□□ 0.85
HMGN1P19-201ENST00000436976 HERC5Q9UII4 1024 aaKnown RBP20.33■□□□□ 0.85
HMGN1P19-201ENST00000436976 PTPREP23469 700 aa20.32■□□□□ 0.84
HMGN1P19-201ENST00000436976 CCDC184Q52MB2 194 aa20.32■□□□□ 0.84
HMGN1P19-201ENST00000436976 ARRDC4Q8NCT1 418 aa20.32■□□□□ 0.84
HMGN1P19-201ENST00000436976 GTF3C2Q8WUA4 911 aaPredicted RBP20.32■□□□□ 0.84
HMGN1P19-201ENST00000436976 EMILIN3Q9NT22 766 aa20.32■□□□□ 0.84
HMGN1P19-201ENST00000436976 PDS5AQ29RF7 1337 aaKnown RBP20.31■□□□□ 0.84
HMGN1P19-201ENST00000436976 SYNGAP1Q96PV0 1343 aa20.31■□□□□ 0.84
HMGN1P19-201ENST00000436976 SLC15A5A6NIM6 579 aa20.31■□□□□ 0.84
HMGN1P19-201ENST00000436976 USP17L10C9JJH3 530 aa20.31■□□□□ 0.84
HMGN1P19-201ENST00000436976 KBTBD13C9JR72 458 aa20.31■□□□□ 0.84
HMGN1P19-201ENST00000436976 ASNSP08243 561 aa20.31■□□□□ 0.84
HMGN1P19-201ENST00000436976 ATP2B2Q01814 1243 aa20.31■□□□□ 0.84
HMGN1P19-201ENST00000436976 CWC22Q9HCG8 908 aaKnown RBP20.31■□□□□ 0.84
HMGN1P19-201ENST00000436976 CEP126Q9P2H0 1117 aa20.31■□□□□ 0.84
HMGN1P19-201ENST00000436976 RABGAP1Q9Y3P9 1069 aa20.31■□□□□ 0.84
HMGN1P19-201ENST00000436976 MUC6Q6W4X9 2439 aa20.31■□□□□ 0.84
HMGN1P19-201ENST00000436976 MYH1P12882 1939 aa20.3■□□□□ 0.84
HMGN1P19-201ENST00000436976 ADCYAP1R1P41586 468 aa20.3■□□□□ 0.84
HMGN1P19-201ENST00000436976 TLE2Q04725 743 aa20.3■□□□□ 0.84
HMGN1P19-201ENST00000436976 GRB14Q14449 540 aa20.3■□□□□ 0.84
HMGN1P19-201ENST00000436976 NCBP3Q53F19 620 aaKnown RBP20.3■□□□□ 0.84
HMGN1P19-201ENST00000436976 WDR78Q5VTH9 848 aa20.3■□□□□ 0.84
HMGN1P19-201ENST00000436976 C1orf53Q5VUE5 145 aa20.3■□□□□ 0.84
HMGN1P19-201ENST00000436976 FERMT2Q96AC1 680 aa20.3■□□□□ 0.84
HMGN1P19-201ENST00000436976 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.29■□□□□ 0.84
HMGN1P19-201ENST00000436976 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms