RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 VARS2Q5ST30 1063 aaKnown RBP8.41□□□□□ -1.06
LSM3P3-201ENST00000436601 DMRTA1Q5VZB9 504 aa8.41□□□□□ -1.06
LSM3P3-201ENST00000436601 POTEEQ6S8J3 1075 aa8.41□□□□□ -1.06
LSM3P3-201ENST00000436601 JDP2Q8WYK2 163 aa8.41□□□□□ -1.06
LSM3P3-201ENST00000436601 AIDAQ96BJ3 306 aa8.41□□□□□ -1.06
LSM3P3-201ENST00000436601 GMLQ99445 158 aa8.41□□□□□ -1.06
LSM3P3-201ENST00000436601 DSCC1Q9BVC3 393 aa8.41□□□□□ -1.06
LSM3P3-201ENST00000436601 PALD1Q9ULE6 856 aa8.41□□□□□ -1.06
LSM3P3-201ENST00000436601 TTF2Q9UNY4 1162 aaKnown RBP8.41□□□□□ -1.06
LSM3P3-201ENST00000436601 RBM8AQ9Y5S9 174 aaKnown RBP8.41□□□□□ -1.06
LSM3P3-201ENST00000436601 MROH7-TTC4A0A0A0MT08 1334 aa8.4□□□□□ -1.06
LSM3P3-201ENST00000436601 GAKO14976 1311 aa8.4□□□□□ -1.06
LSM3P3-201ENST00000436601 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.4□□□□□ -1.06
LSM3P3-201ENST00000436601 GPR75-ASB3A0A0A6YYF3 556 aa8.4□□□□□ -1.06
LSM3P3-201ENST00000436601 PALM3A6NDB9 673 aaPredicted RBP8.4□□□□□ -1.06
LSM3P3-201ENST00000436601 GSG1L2A8MUP6 293 aa8.4□□□□□ -1.06
LSM3P3-201ENST00000436601 LDHCP07864 332 aa8.4□□□□□ -1.06
LSM3P3-201ENST00000436601 SCNN1DP51172 638 aa8.4□□□□□ -1.06
LSM3P3-201ENST00000436601 PPP4CP60510 307 aa8.4□□□□□ -1.06
LSM3P3-201ENST00000436601 KIAA0825Q8IV33 1275 aa8.4□□□□□ -1.06
LSM3P3-201ENST00000436601 EPS8L1Q8TE68 723 aa8.4□□□□□ -1.06
LSM3P3-201ENST00000436601 KCNB2Q92953 911 aa8.4□□□□□ -1.06
LSM3P3-201ENST00000436601 IL17RAQ96F46 866 aa8.4□□□□□ -1.06
LSM3P3-201ENST00000436601 MRIQ9BWK5 157 aa8.4□□□□□ -1.06
LSM3P3-201ENST00000436601 PRR14Q9BWN1 585 aa8.4□□□□□ -1.06
LSM3P3-201ENST00000436601 AATFQ9NY61 560 aaKnown RBP eCLIP8.4□□□□□ -1.06
LSM3P3-201ENST00000436601 DAGLAQ9Y4D2 1042 aa8.4□□□□□ -1.06
LSM3P3-201ENST00000436601 BRCA1P38398 1863 aaKnown RBP8.4□□□□□ -1.07
LSM3P3-201ENST00000436601 SLC27A2O14975 620 aa8.39□□□□□ -1.07
LSM3P3-201ENST00000436601 ACTN4O43707 911 aaKnown RBP8.39□□□□□ -1.07
LSM3P3-201ENST00000436601 BRD1O95696 1058 aa8.39□□□□□ -1.07
LSM3P3-201ENST00000436601 FGAP02671 866 aa8.39□□□□□ -1.07
LSM3P3-201ENST00000436601 LMNB1P20700 586 aa8.39□□□□□ -1.07
LSM3P3-201ENST00000436601 RFX1P22670 979 aa8.39□□□□□ -1.07
LSM3P3-201ENST00000436601 BTDP43251 543 aa8.39□□□□□ -1.07
LSM3P3-201ENST00000436601 RHBDL3P58872 404 aa8.39□□□□□ -1.07
LSM3P3-201ENST00000436601 HDLBPQ00341 1268 aaKnown RBP8.39□□□□□ -1.07
LSM3P3-201ENST00000436601 KCNA1Q09470 495 aa8.39□□□□□ -1.07
LSM3P3-201ENST00000436601 TNIP1Q15025 636 aa8.39□□□□□ -1.07
LSM3P3-201ENST00000436601 NR6A1Q15406 480 aa8.39□□□□□ -1.07
LSM3P3-201ENST00000436601 ALX1Q15699 326 aa8.39□□□□□ -1.07
LSM3P3-201ENST00000436601 MORN1Q5T089 497 aa8.39□□□□□ -1.07
LSM3P3-201ENST00000436601 CREB3L3Q68CJ9 461 aa8.39□□□□□ -1.07
LSM3P3-201ENST00000436601 CIAPIN1Q6FI81 312 aa8.39□□□□□ -1.07
LSM3P3-201ENST00000436601 HHIPL2Q6UWX4 724 aa8.39□□□□□ -1.07
LSM3P3-201ENST00000436601 SH3RF3Q8TEJ3 882 aaPredicted RBP8.39□□□□□ -1.07
LSM3P3-201ENST00000436601 EPB41L4AQ9HCS5 686 aaPredicted RBP8.39□□□□□ -1.07
LSM3P3-201ENST00000436601 PCDHAC2Q9Y5I4 1007 aa8.39□□□□□ -1.07
LSM3P3-201ENST00000436601 SNX14Q9Y5W7 946 aa8.39□□□□□ -1.07
LSM3P3-201ENST00000436601 TAF6LQ9Y6J9 622 aa8.39□□□□□ -1.07
LSM3P3-201ENST00000436601 SLC4A4Q9Y6R1 1079 aa8.39□□□□□ -1.07
LSM3P3-201ENST00000436601 CACNA1SQ13698 1873 aa8.38□□□□□ -1.07
LSM3P3-201ENST00000436601 MYO3BQ8WXR4 1341 aa8.38□□□□□ -1.07
LSM3P3-201ENST00000436601 ZNF541Q9H0D2 1346 aa8.38□□□□□ -1.07
LSM3P3-201ENST00000436601 BHMG1C9JSJ3 638 aaPredicted RBP8.38□□□□□ -1.07
LSM3P3-201ENST00000436601 TK2O00142 265 aa8.38□□□□□ -1.07
LSM3P3-201ENST00000436601 RNF40O75150 1001 aa8.38□□□□□ -1.07
LSM3P3-201ENST00000436601 BAG3O95817 575 aa8.38□□□□□ -1.07
LSM3P3-201ENST00000436601 APPP05067 770 aa8.38□□□□□ -1.07
LSM3P3-201ENST00000436601 CYP21A2P08686 494 aa8.38□□□□□ -1.07
LSM3P3-201ENST00000436601 GNAT2P19087 354 aa8.38□□□□□ -1.07
LSM3P3-201ENST00000436601 CRKP46108 304 aa8.38□□□□□ -1.07
LSM3P3-201ENST00000436601 SEMA3FQ13275 785 aa8.38□□□□□ -1.07
LSM3P3-201ENST00000436601 GPR162Q16538 588 aa8.38□□□□□ -1.07
LSM3P3-201ENST00000436601 TSGA10IPQ3SY00 556 aa8.38□□□□□ -1.07
LSM3P3-201ENST00000436601 TMCO4Q5TGY1 634 aa8.38□□□□□ -1.07
LSM3P3-201ENST00000436601 APOBEC3HQ6NTF7 200 aaKnown RBP8.38□□□□□ -1.07
LSM3P3-201ENST00000436601 IFNL3Q8IZI9 196 aa8.38□□□□□ -1.07
LSM3P3-201ENST00000436601 AGBL3Q8NEM8 1001 aa8.38□□□□□ -1.07
LSM3P3-201ENST00000436601 SDR42E1Q8WUS8 393 aa8.38□□□□□ -1.07
LSM3P3-201ENST00000436601 SYMPKQ92797 1274 aaKnown RBP8.38□□□□□ -1.07
LSM3P3-201ENST00000436601 TEKT1Q969V4 418 aa8.38□□□□□ -1.07
LSM3P3-201ENST00000436601 ZDHHC15Q96MV8 337 aa8.38□□□□□ -1.07
LSM3P3-201ENST00000436601 MKRN1Q9UHC7 482 aaKnown RBP8.38□□□□□ -1.07
LSM3P3-201ENST00000436601 CTNNA3Q9UI47 895 aa8.38□□□□□ -1.07
LSM3P3-201ENST00000436601 RPAP1Q9BWH6 1393 aaPredicted RBP8.37□□□□□ -1.07
LSM3P3-201ENST00000436601 MCCP23508 829 aa8.37□□□□□ -1.07
LSM3P3-201ENST00000436601 EIF6P56537 245 aaKnown RBP8.37□□□□□ -1.07
LSM3P3-201ENST00000436601 ANAPC15P60006 121 aa8.37□□□□□ -1.07
LSM3P3-201ENST00000436601 ADCK5Q3MIX3 580 aa8.37□□□□□ -1.07
LSM3P3-201ENST00000436601 CDC42EP5Q6NZY7 148 aa8.37□□□□□ -1.07
LSM3P3-201ENST00000436601 ZFRQ96KR1 1074 aaKnown RBP8.37□□□□□ -1.07
LSM3P3-201ENST00000436601 UCN2Q96RP3 112 aa8.37□□□□□ -1.07
LSM3P3-201ENST00000436601 CRNKL1Q9BZJ0 848 aaKnown RBP8.37□□□□□ -1.07
LSM3P3-201ENST00000436601 ATP8A2Q9NTI2 1148 aa8.37□□□□□ -1.07
LSM3P3-201ENST00000436601 USP40Q9NVE5 1235 aa8.37□□□□□ -1.07
LSM3P3-201ENST00000436601 RNF181Q9P0P0 153 aa8.37□□□□□ -1.07
LSM3P3-201ENST00000436601 DOCK2Q92608 1830 aa8.37□□□□□ -1.07
LSM3P3-201ENST00000436601 ZMYM6O95789 1325 aa8.36□□□□□ -1.07
LSM3P3-201ENST00000436601 SHTN1A0MZ66 631 aa8.36□□□□□ -1.07
LSM3P3-201ENST00000436601 SMIM22K7EJ46 135 aa8.36□□□□□ -1.07
LSM3P3-201ENST00000436601 GRIN3BO60391 1043 aa8.36□□□□□ -1.07
LSM3P3-201ENST00000436601 RPS12P25398 132 aaKnown RBP8.36□□□□□ -1.07
LSM3P3-201ENST00000436601 LMOD1P29536 600 aaPredicted RBP8.36□□□□□ -1.07
LSM3P3-201ENST00000436601 GMPSP49915 693 aaPredicted RBP8.36□□□□□ -1.07
LSM3P3-201ENST00000436601 ZNF280AP59817 542 aaPredicted RBP8.36□□□□□ -1.07
LSM3P3-201ENST00000436601 COL9A3Q14050 684 aaPredicted RBP8.36□□□□□ -1.07
LSM3P3-201ENST00000436601 CFAP100Q494V2 611 aa8.36□□□□□ -1.07
LSM3P3-201ENST00000436601 RNF20Q5VTR2 975 aa8.36□□□□□ -1.07
LSM3P3-201ENST00000436601 C9orf131Q5VYM1 1079 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms