RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 ZNF280CQ8ND82 737 aa19.54■□□□□ 0.72
SMPD4-207ENST00000435455 OSBP2Q969R2 916 aa19.54■□□□□ 0.72
SMPD4-207ENST00000435455 STRBPQ96SI9 672 aaKnown RBP19.54■□□□□ 0.72
SMPD4-207ENST00000435455 MYH8P13535 1937 aa19.53■□□□□ 0.72
SMPD4-207ENST00000435455 PDHXO00330 501 aa19.53■□□□□ 0.72
SMPD4-207ENST00000435455 GDF11O95390 407 aa19.53■□□□□ 0.72
SMPD4-207ENST00000435455 GABPAQ06546 454 aa19.53■□□□□ 0.72
SMPD4-207ENST00000435455 SPP2Q13103 211 aa19.53■□□□□ 0.72
SMPD4-207ENST00000435455 EVI5LQ96CN4 794 aa19.53■□□□□ 0.72
SMPD4-207ENST00000435455 WDR18Q9BV38 432 aa19.53■□□□□ 0.72
SMPD4-207ENST00000435455 MCOLN1Q9GZU1 580 aa19.53■□□□□ 0.72
SMPD4-207ENST00000435455 ZBTB21Q9ULJ3 1066 aa19.53■□□□□ 0.72
SMPD4-207ENST00000435455 TLR2O60603 784 aa19.52■□□□□ 0.72
SMPD4-207ENST00000435455 GNAT2P19087 354 aa19.52■□□□□ 0.72
SMPD4-207ENST00000435455 CERKLQ49MI3 558 aaPredicted RBP19.52■□□□□ 0.72
SMPD4-207ENST00000435455 GPAT2Q6NUI2 795 aa19.52■□□□□ 0.72
SMPD4-207ENST00000435455 GIMAP6Q6P9H5 292 aa19.52■□□□□ 0.72
SMPD4-207ENST00000435455 TICAM2Q86XR7 235 aa19.52■□□□□ 0.72
SMPD4-207ENST00000435455 PROCA1Q8NCQ7 364 aaPredicted RBP19.52■□□□□ 0.72
SMPD4-207ENST00000435455 ERO1AQ96HE7 468 aa19.52■□□□□ 0.72
SMPD4-207ENST00000435455 LOC285556D6RIA3 1793 aa19.52■□□□□ 0.71
SMPD4-207ENST00000435455 GPAA1O43292 621 aa19.51■□□□□ 0.71
SMPD4-207ENST00000435455 SHMT1P34896 483 aa19.51■□□□□ 0.71
SMPD4-207ENST00000435455 JAG1P78504 1218 aa19.51■□□□□ 0.71
SMPD4-207ENST00000435455 SP3Q02447 781 aa19.51■□□□□ 0.71
SMPD4-207ENST00000435455 CABP5Q9NP86 173 aa19.51■□□□□ 0.71
SMPD4-207ENST00000435455 SWAP70Q9UH65 585 aa19.51■□□□□ 0.71
SMPD4-207ENST00000435455 SLC45A1Q9Y2W3 748 aa19.51■□□□□ 0.71
SMPD4-207ENST00000435455 USP17L12C9JPN9 530 aa19.5■□□□□ 0.71
SMPD4-207ENST00000435455 USP17L21D6R901 530 aa19.5■□□□□ 0.71
SMPD4-207ENST00000435455 GH2P01242 217 aa19.5■□□□□ 0.71
SMPD4-207ENST00000435455 CYP2D6P10635 497 aa19.5■□□□□ 0.71
SMPD4-207ENST00000435455 PKN2Q16513 984 aaKnown RBP19.5■□□□□ 0.71
SMPD4-207ENST00000435455 ABCB5Q2M3G0 1257 aa19.5■□□□□ 0.71
SMPD4-207ENST00000435455 ZMYM1Q5SVZ6 1142 aa19.5■□□□□ 0.71
SMPD4-207ENST00000435455 C12orf60Q5U649 245 aa19.5■□□□□ 0.71
SMPD4-207ENST00000435455 PLEKHM2Q8IWE5 1019 aa19.5■□□□□ 0.71
SMPD4-207ENST00000435455 PARK7Q99497 189 aaKnown RBP19.5■□□□□ 0.71
SMPD4-207ENST00000435455 OSBPL3Q9H4L5 887 aa19.5■□□□□ 0.71
SMPD4-207ENST00000435455 HMGCS2P54868 508 aa19.49■□□□□ 0.71
SMPD4-207ENST00000435455 ARHGEF6Q15052 776 aa19.49■□□□□ 0.71
SMPD4-207ENST00000435455 SH3D19Q5HYK7 790 aa19.49■□□□□ 0.71
SMPD4-207ENST00000435455 ABHD8Q96I13 439 aa19.49■□□□□ 0.71
SMPD4-207ENST00000435455 ARPP21Q9UBL0 812 aaPredicted RBP19.49■□□□□ 0.71
SMPD4-207ENST00000435455 AGTPBP1Q9UPW5 1226 aa19.49■□□□□ 0.71
SMPD4-207ENST00000435455 GSG1L2A8MUP6 293 aa19.48■□□□□ 0.71
SMPD4-207ENST00000435455 C19orf81C9J6K1 198 aa19.48■□□□□ 0.71
SMPD4-207ENST00000435455 USP17L10C9JJH3 530 aa19.48■□□□□ 0.71
SMPD4-207ENST00000435455 M0R2C6 588 aa19.48■□□□□ 0.71
SMPD4-207ENST00000435455 BACE1P56817 501 aa19.48■□□□□ 0.71
SMPD4-207ENST00000435455 PABPC4Q13310 644 aaKnown RBP eCLIP19.48■□□□□ 0.71
SMPD4-207ENST00000435455 SHROOM1Q2M3G4 852 aaPredicted RBP19.48■□□□□ 0.71
SMPD4-207ENST00000435455 SBK1Q52WX2 424 aa19.48■□□□□ 0.71
SMPD4-207ENST00000435455 CTR9Q6PD62 1173 aa19.48■□□□□ 0.71
SMPD4-207ENST00000435455 CD99L2Q8TCZ2 262 aa19.48■□□□□ 0.71
SMPD4-207ENST00000435455 TRIM6-TRIM34B2RNG4 842 aa19.47■□□□□ 0.71
SMPD4-207ENST00000435455 EVX2Q03828 476 aa19.47■□□□□ 0.71
SMPD4-207ENST00000435455 MTMR2Q13614 643 aa19.47■□□□□ 0.71
SMPD4-207ENST00000435455 RAB3GAP1Q15042 981 aa19.47■□□□□ 0.71
SMPD4-207ENST00000435455 C17orf99Q6UX52 265 aa19.47■□□□□ 0.71
SMPD4-207ENST00000435455 C16orf86Q6ZW13 317 aa19.47■□□□□ 0.71
SMPD4-207ENST00000435455 DYNLL2Q96FJ2 89 aa19.47■□□□□ 0.71
SMPD4-207ENST00000435455 TMOD4Q9NZQ9 345 aa19.47■□□□□ 0.71
SMPD4-207ENST00000435455 PNMA3Q9UL41 463 aa19.47■□□□□ 0.71
SMPD4-207ENST00000435455 ADGRA2Q96PE1 1338 aa19.47■□□□□ 0.71
SMPD4-207ENST00000435455 CYP2D7A0A087X1C5 515 aa19.46■□□□□ 0.71
SMPD4-207ENST00000435455 PATL2C9JE40 543 aaKnown RBP19.46■□□□□ 0.71
SMPD4-207ENST00000435455 APPP05067 770 aa19.46■□□□□ 0.71
SMPD4-207ENST00000435455 KIF22Q14807 665 aa19.46■□□□□ 0.71
SMPD4-207ENST00000435455 SEC62Q99442 399 aaKnown RBP19.46■□□□□ 0.71
SMPD4-207ENST00000435455 NACAP1Q9BZK3 213 aa19.46■□□□□ 0.71
SMPD4-207ENST00000435455 EFCC1Q9HA90 598 aa19.46■□□□□ 0.71
SMPD4-207ENST00000435455 MPHOSPH10O00566 681 aaKnown RBP19.45■□□□□ 0.7
SMPD4-207ENST00000435455 TDO2P48775 406 aa19.45■□□□□ 0.7
SMPD4-207ENST00000435455 CDK8P49336 464 aa19.45■□□□□ 0.7
SMPD4-207ENST00000435455 TREML2Q5T2D2 321 aa19.45■□□□□ 0.7
SMPD4-207ENST00000435455 FBXO46Q6PJ61 603 aaPredicted RBP19.45■□□□□ 0.7
SMPD4-207ENST00000435455 OTOP1Q7RTM1 612 aa19.45■□□□□ 0.7
SMPD4-207ENST00000435455 SLC44A5Q8NCS7 719 aa19.45■□□□□ 0.7
SMPD4-207ENST00000435455 RILPL2Q969X0 211 aa19.45■□□□□ 0.7
SMPD4-207ENST00000435455 CCDC17Q96LX7 622 aa19.45■□□□□ 0.7
SMPD4-207ENST00000435455 HELLSQ9NRZ9 838 aa19.45■□□□□ 0.7
SMPD4-207ENST00000435455 CPA4Q9UI42 421 aa19.45■□□□□ 0.7
SMPD4-207ENST00000435455 TRIM17Q9Y577 477 aa19.45■□□□□ 0.7
SMPD4-207ENST00000435455 CYP2C8P10632 490 aa19.44■□□□□ 0.7
SMPD4-207ENST00000435455 USP17L2Q6R6M4 530 aa19.44■□□□□ 0.7
SMPD4-207ENST00000435455 TMEM179Q6ZVK1 233 aa19.44■□□□□ 0.7
SMPD4-207ENST00000435455 SMCR8Q8TEV9 937 aaPredicted RBP19.44■□□□□ 0.7
SMPD4-207ENST00000435455 FEZ1Q99689 392 aa19.44■□□□□ 0.7
SMPD4-207ENST00000435455 EPB41L4AQ9HCS5 686 aaPredicted RBP19.44■□□□□ 0.7
SMPD4-207ENST00000435455 ROBO3Q96MS0 1386 aa19.44■□□□□ 0.7
SMPD4-207ENST00000435455 CAPN15O75808 1086 aa19.43■□□□□ 0.7
SMPD4-207ENST00000435455 BCRP11274 1271 aa19.43■□□□□ 0.7
SMPD4-207ENST00000435455 OSBPP22059 807 aa19.43■□□□□ 0.7
SMPD4-207ENST00000435455 USP14P54578 494 aa19.43■□□□□ 0.7
SMPD4-207ENST00000435455 LACTBP83111 547 aaPredicted RBP19.43■□□□□ 0.7
SMPD4-207ENST00000435455 SEPT2Q15019 361 aa19.43■□□□□ 0.7
SMPD4-207ENST00000435455 MINDY4BA8MYZ0 360 aa19.42■□□□□ 0.7
SMPD4-207ENST00000435455 HOXA7P31268 230 aaPredicted RBP19.42■□□□□ 0.7
SMPD4-207ENST00000435455 GUCY1A2P33402 732 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms