RNA–Protein interactions for RNA: ENST00000435437.2

RPE-207, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 2 BASIC

Gene RPE, Length 858 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-207ENST00000435437 CCDC85CA6NKD9 419 aa10.71□□□□□ -0.69
RPE-207ENST00000435437 FOXP2O15409 715 aa10.71□□□□□ -0.69
RPE-207ENST00000435437 PLCG2P16885 1265 aa10.71□□□□□ -0.69
RPE-207ENST00000435437 SPP2Q13103 211 aa10.71□□□□□ -0.69
RPE-207ENST00000435437 HDAC1Q13547 482 aaPredicted RBP10.71□□□□□ -0.69
RPE-207ENST00000435437 SH3D19Q5HYK7 790 aa10.71□□□□□ -0.69
RPE-207ENST00000435437 FBXO46Q6PJ61 603 aaPredicted RBP10.71□□□□□ -0.69
RPE-207ENST00000435437 SIAH1Q8IUQ4 282 aa10.71□□□□□ -0.69
RPE-207ENST00000435437 FOXP4Q8IVH2 680 aaPredicted RBP10.71□□□□□ -0.69
RPE-207ENST00000435437 OSBP2Q969R2 916 aa10.71□□□□□ -0.69
RPE-207ENST00000435437 DHX36Q9H2U1 1008 aaKnown RBP10.71□□□□□ -0.69
RPE-207ENST00000435437 ECHDC1Q9NTX5 307 aa10.71□□□□□ -0.69
RPE-207ENST00000435437 PTPN22Q9Y2R2 807 aa10.71□□□□□ -0.69
RPE-207ENST00000435437 TRIM17Q9Y577 477 aa10.71□□□□□ -0.69
RPE-207ENST00000435437 TRIM75PA6NK02 468 aa10.7□□□□□ -0.7
RPE-207ENST00000435437 MBD4O95243 580 aa10.7□□□□□ -0.7
RPE-207ENST00000435437 TTF1Q15361 905 aaPredicted RBP10.7□□□□□ -0.7
RPE-207ENST00000435437 UBE3CQ15386 1083 aa10.7□□□□□ -0.7
RPE-207ENST00000435437 DYNLL2Q96FJ2 89 aa10.7□□□□□ -0.7
RPE-207ENST00000435437 SEC62Q99442 399 aaKnown RBP10.7□□□□□ -0.7
RPE-207ENST00000435437 EHD4Q9H223 541 aa10.7□□□□□ -0.7
RPE-207ENST00000435437 ZFYVE28Q9HCC9 887 aa10.7□□□□□ -0.7
RPE-207ENST00000435437 ZBTB21Q9ULJ3 1066 aa10.7□□□□□ -0.7
RPE-207ENST00000435437 USP17L5A8MUK1 530 aa10.69□□□□□ -0.7
RPE-207ENST00000435437 M0R2C6 588 aa10.69□□□□□ -0.7
RPE-207ENST00000435437 ECM2O94769 699 aaPredicted RBP10.69□□□□□ -0.7
RPE-207ENST00000435437 HMGCS2P54868 508 aa10.69□□□□□ -0.7
RPE-207ENST00000435437 SOX10P56693 466 aa10.69□□□□□ -0.7
RPE-207ENST00000435437 LACTBP83111 547 aaPredicted RBP10.69□□□□□ -0.7
RPE-207ENST00000435437 KIAA1755Q5JYT7 1200 aa10.69□□□□□ -0.7
RPE-207ENST00000435437 TMED8Q6PL24 325 aaPredicted RBP10.69□□□□□ -0.7
RPE-207ENST00000435437 CLEC10AQ8IUN9 316 aa10.69□□□□□ -0.7
RPE-207ENST00000435437 SMC5Q8IY18 1101 aa10.69□□□□□ -0.7
RPE-207ENST00000435437 KBTBD3Q8NAB2 608 aa10.69□□□□□ -0.7
RPE-207ENST00000435437 ZNF280CQ8ND82 737 aa10.69□□□□□ -0.7
RPE-207ENST00000435437 ACER1Q8TDN7 264 aa10.69□□□□□ -0.7
RPE-207ENST00000435437 TRIM47Q96LD4 638 aa10.69□□□□□ -0.7
RPE-207ENST00000435437 WDR18Q9BV38 432 aa10.69□□□□□ -0.7
RPE-207ENST00000435437 EPB41L4AQ9HCS5 686 aaPredicted RBP10.69□□□□□ -0.7
RPE-207ENST00000435437 PICK1Q9NRD5 415 aa10.69□□□□□ -0.7
RPE-207ENST00000435437 EMILIN3Q9NT22 766 aa10.69□□□□□ -0.7
RPE-207ENST00000435437 SUPT16HQ9Y5B9 1047 aaKnown RBP10.69□□□□□ -0.7
RPE-207ENST00000435437 TACC3Q9Y6A5 838 aa10.69□□□□□ -0.7
RPE-207ENST00000435437 PTCH2Q9Y6C5 1203 aa10.69□□□□□ -0.7
RPE-207ENST00000435437 TNRC18O15417 2968 aaPredicted RBP10.69□□□□□ -0.7
RPE-207ENST00000435437 A0A0G2JMZ2 1700 aa10.68□□□□□ -0.7
RPE-207ENST00000435437 A0A1W2PRG0 241 aa10.68□□□□□ -0.7
RPE-207ENST00000435437 POTEFA5A3E0 1075 aa10.68□□□□□ -0.7
RPE-207ENST00000435437 GSG1L2A8MUP6 293 aa10.68□□□□□ -0.7
RPE-207ENST00000435437 GH2P01242 217 aa10.68□□□□□ -0.7
RPE-207ENST00000435437 USP5P45974 858 aa10.68□□□□□ -0.7
RPE-207ENST00000435437 OTUD7BQ6GQQ9 843 aa10.68□□□□□ -0.7
RPE-207ENST00000435437 SAMD1Q6SPF0 538 aaPredicted RBP10.68□□□□□ -0.7
RPE-207ENST00000435437 GADL1Q6ZQY3 521 aa10.68□□□□□ -0.7
RPE-207ENST00000435437 ERO1AQ96HE7 468 aa10.68□□□□□ -0.7
RPE-207ENST00000435437 STRBPQ96SI9 672 aaKnown RBP10.68□□□□□ -0.7
RPE-207ENST00000435437 NOL10Q9BSC4 688 aaKnown RBP10.68□□□□□ -0.7
RPE-207ENST00000435437 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.68□□□□□ -0.7
RPE-207ENST00000435437 STAP2Q9UGK3 403 aa10.68□□□□□ -0.7
RPE-207ENST00000435437 SERPINB13Q9UIV8 391 aa10.68□□□□□ -0.7
RPE-207ENST00000435437 GABRQQ9UN88 632 aa10.68□□□□□ -0.7
RPE-207ENST00000435437 AGTPBP1Q9UPW5 1226 aa10.68□□□□□ -0.7
RPE-207ENST00000435437 SLC45A1Q9Y2W3 748 aa10.68□□□□□ -0.7
RPE-207ENST00000435437 TTC41PQ6P2S7 1318 aa10.67□□□□□ -0.7
RPE-207ENST00000435437 BACE1P56817 501 aa10.67□□□□□ -0.7
RPE-207ENST00000435437 MTMR2Q13614 643 aa10.67□□□□□ -0.7
RPE-207ENST00000435437 PKN2Q16513 984 aaKnown RBP10.67□□□□□ -0.7
RPE-207ENST00000435437 C12orf60Q5U649 245 aa10.67□□□□□ -0.7
RPE-207ENST00000435437 CTR9Q6PD62 1173 aa10.67□□□□□ -0.7
RPE-207ENST00000435437 ARMC5Q96C12 935 aa10.67□□□□□ -0.7
RPE-207ENST00000435437 EFCC1Q9HA90 598 aa10.67□□□□□ -0.7
RPE-207ENST00000435437 TXNRD2Q9NNW7 524 aa10.67□□□□□ -0.7
RPE-207ENST00000435437 RTN4Q9NQC3 1192 aaKnown RBP10.67□□□□□ -0.7
RPE-207ENST00000435437 USP17L12C9JPN9 530 aa10.66□□□□□ -0.7
RPE-207ENST00000435437 USP17L21D6R901 530 aa10.66□□□□□ -0.7
RPE-207ENST00000435437 CNMDO75829 334 aa10.66□□□□□ -0.7
RPE-207ENST00000435437 AKR1B1P15121 316 aa10.66□□□□□ -0.7
RPE-207ENST00000435437 OSBPP22059 807 aa10.66□□□□□ -0.7
RPE-207ENST00000435437 SEPT2Q15019 361 aa10.66□□□□□ -0.7
RPE-207ENST00000435437 ANKRD45Q5TZF3 282 aa10.66□□□□□ -0.7
RPE-207ENST00000435437 FASTKD5Q7L8L6 764 aaKnown RBP10.66□□□□□ -0.7
RPE-207ENST00000435437 PROCA1Q8NCQ7 364 aaPredicted RBP10.66□□□□□ -0.7
RPE-207ENST00000435437 NKX2-3Q8TAU0 364 aa10.66□□□□□ -0.7
RPE-207ENST00000435437 CRNKL1Q9BZJ0 848 aaKnown RBP10.66□□□□□ -0.7
RPE-207ENST00000435437 ASCC2Q9H1I8 757 aaPredicted RBP10.66□□□□□ -0.7
RPE-207ENST00000435437 MCM9Q9NXL9 1143 aa10.66□□□□□ -0.7
RPE-207ENST00000435437 MKI67P46013 3256 aaKnown RBP10.66□□□□□ -0.7
RPE-207ENST00000435437 RNF113AO15541 343 aaKnown RBP10.65□□□□□ -0.7
RPE-207ENST00000435437 HLA-DOAP06340 250 aa10.65□□□□□ -0.7
RPE-207ENST00000435437 ASNSP08243 561 aa10.65□□□□□ -0.7
RPE-207ENST00000435437 MX1P20591 662 aa10.65□□□□□ -0.7
RPE-207ENST00000435437 PDE4AP27815 886 aa10.65□□□□□ -0.7
RPE-207ENST00000435437 HOXA7P31268 230 aaPredicted RBP10.65□□□□□ -0.7
RPE-207ENST00000435437 PDE1AP54750 535 aa10.65□□□□□ -0.7
RPE-207ENST00000435437 IRX6P78412 446 aaPredicted RBP10.65□□□□□ -0.7
RPE-207ENST00000435437 Q3C1V9 767 aa10.65□□□□□ -0.7
RPE-207ENST00000435437 ZMYM1Q5SVZ6 1142 aa10.65□□□□□ -0.7
RPE-207ENST00000435437 CCDC129Q6ZRS4 1044 aa10.65□□□□□ -0.7
RPE-207ENST00000435437 CERS3Q8IU89 383 aa10.65□□□□□ -0.7
RPE-207ENST00000435437 CRACR2BQ8N4Y2 399 aaPredicted RBP10.65□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms