RNA–Protein interactions for RNA: ENST00000435218.6

TMEM40-204, Transcript of transmembrane protein 40, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM40, Length 1,547 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM40-204ENST00000435218 SHTN1A0MZ66 631 aa17.71■□□□□ 0.43
TMEM40-204ENST00000435218 DDTLA6NHG4 134 aaPredicted RBP17.71■□□□□ 0.43
TMEM40-204ENST00000435218 SCRN1Q12765 414 aa17.71■□□□□ 0.43
TMEM40-204ENST00000435218 TCP10Q12799 353 aa17.71■□□□□ 0.43
TMEM40-204ENST00000435218 SH3BP5LQ7L8J4 393 aa17.71■□□□□ 0.43
TMEM40-204ENST00000435218 FOXP4Q8IVH2 680 aaPredicted RBP17.71■□□□□ 0.43
TMEM40-204ENST00000435218 ZFPM1Q8IX07 1006 aa17.71■□□□□ 0.43
TMEM40-204ENST00000435218 ENAHQ8N8S7 591 aaPredicted RBP17.71■□□□□ 0.43
TMEM40-204ENST00000435218 SLC44A5Q8NCS7 719 aa17.71■□□□□ 0.43
TMEM40-204ENST00000435218 ANKS1AQ92625 1134 aa17.71■□□□□ 0.43
TMEM40-204ENST00000435218 ATAD5Q96QE3 1844 aa17.7■□□□□ 0.42
TMEM40-204ENST00000435218 H7C1D1 291 aa17.7■□□□□ 0.42
TMEM40-204ENST00000435218 TFAP4Q01664 338 aa17.7■□□□□ 0.42
TMEM40-204ENST00000435218 GPR162Q16538 588 aa17.7■□□□□ 0.42
TMEM40-204ENST00000435218 NBPF9Q3BBW0 867 aa17.7■□□□□ 0.42
TMEM40-204ENST00000435218 C9orf131Q5VYM1 1079 aa17.7■□□□□ 0.42
TMEM40-204ENST00000435218 DGKHQ86XP1 1220 aa17.7■□□□□ 0.42
TMEM40-204ENST00000435218 NECAB1Q8N987 351 aa17.7■□□□□ 0.42
TMEM40-204ENST00000435218 NEDD1Q8NHV4 660 aa17.7■□□□□ 0.42
TMEM40-204ENST00000435218 ZKSCAN3Q9BRR0 538 aa17.7■□□□□ 0.42
TMEM40-204ENST00000435218 FOXD4L1Q9NU39 408 aa17.7■□□□□ 0.42
TMEM40-204ENST00000435218 HPS5Q9UPZ3 1129 aa17.7■□□□□ 0.42
TMEM40-204ENST00000435218 CLRN2A0PK11 232 aa17.69■□□□□ 0.42
TMEM40-204ENST00000435218 CCDC69A6NI79 296 aa17.69■□□□□ 0.42
TMEM40-204ENST00000435218 TSPY3P0CV98 308 aa17.69■□□□□ 0.42
TMEM40-204ENST00000435218 TSPY8P0CW00 308 aa17.69■□□□□ 0.42
TMEM40-204ENST00000435218 NOVP48745 357 aa17.69■□□□□ 0.42
TMEM40-204ENST00000435218 FAM47AQ5JRC9 791 aa17.69■□□□□ 0.42
TMEM40-204ENST00000435218 SENP2Q9HC62 589 aa17.69■□□□□ 0.42
TMEM40-204ENST00000435218 GOLGA8BA8MQT2 603 aa17.68■□□□□ 0.42
TMEM40-204ENST00000435218 DHX16O60231 1041 aaKnown RBP17.68■□□□□ 0.42
TMEM40-204ENST00000435218 EGFRP00533 1210 aa17.68■□□□□ 0.42
TMEM40-204ENST00000435218 SHMT1P34896 483 aa17.68■□□□□ 0.42
TMEM40-204ENST00000435218 TNNI2P48788 182 aa17.68■□□□□ 0.42
TMEM40-204ENST00000435218 STK3Q13188 491 aa17.68■□□□□ 0.42
TMEM40-204ENST00000435218 TNFAIP1Q13829 316 aa17.68■□□□□ 0.42
TMEM40-204ENST00000435218 KIF4BQ2VIQ3 1234 aa17.68■□□□□ 0.42
TMEM40-204ENST00000435218 RCSD1Q6JBY9 416 aa17.68■□□□□ 0.42
TMEM40-204ENST00000435218 TATDN1Q6P1N9 297 aa17.68■□□□□ 0.42
TMEM40-204ENST00000435218 NFXL1Q6ZNB6 911 aa17.68■□□□□ 0.42
TMEM40-204ENST00000435218 CCDC17Q96LX7 622 aa17.68■□□□□ 0.42
TMEM40-204ENST00000435218 DNAJC18Q9H819 358 aa17.68■□□□□ 0.42
TMEM40-204ENST00000435218 HERC5Q9UII4 1024 aaKnown RBP17.68■□□□□ 0.42
TMEM40-204ENST00000435218 SMC3Q9UQE7 1217 aa17.68■□□□□ 0.42
TMEM40-204ENST00000435218 SLC12A7Q9Y666 1083 aa17.68■□□□□ 0.42
TMEM40-204ENST00000435218 TCP10L2B9ZVM9 353 aa17.67■□□□□ 0.42
TMEM40-204ENST00000435218 ZBTB43O43298 467 aa17.67■□□□□ 0.42
TMEM40-204ENST00000435218 PDIA4P13667 645 aaKnown RBP17.67■□□□□ 0.42
TMEM40-204ENST00000435218 PPP2R5BQ15173 497 aa17.67■□□□□ 0.42
TMEM40-204ENST00000435218 IFIT1BQ5T764 474 aaKnown RBP17.67■□□□□ 0.42
TMEM40-204ENST00000435218 SAMD7Q7Z3H4 446 aa17.67■□□□□ 0.42
TMEM40-204ENST00000435218 ZSCAN29Q8IWY8 852 aaPredicted RBP17.67■□□□□ 0.42
TMEM40-204ENST00000435218 SMARCC2Q8TAQ2 1214 aa17.67■□□□□ 0.42
TMEM40-204ENST00000435218 IL17RBQ9NRM6 502 aa17.67■□□□□ 0.42
TMEM40-204ENST00000435218 PGAP2Q9UHJ9 254 aa17.67■□□□□ 0.42
TMEM40-204ENST00000435218 NUCB2P80303 420 aa17.67■□□□□ 0.42
TMEM40-204ENST00000435218 SYNE3Q6ZMZ3 975 aa17.67■□□□□ 0.42
TMEM40-204ENST00000435218 ZNF654Q8IZM8 581 aa17.67■□□□□ 0.42
TMEM40-204ENST00000435218 CRACR2BQ8N4Y2 399 aaPredicted RBP17.67■□□□□ 0.42
TMEM40-204ENST00000435218 CSRNP1Q96S65 589 aa17.67■□□□□ 0.42
TMEM40-204ENST00000435218 VEZTQ9HBM0 779 aa17.67■□□□□ 0.42
TMEM40-204ENST00000435218 WDR90Q96KV7 1748 aa17.66■□□□□ 0.42
TMEM40-204ENST00000435218 IGKV6D-41A0A0C4DH26 115 aa17.66■□□□□ 0.42
TMEM40-204ENST00000435218 TBC1D12O60347 775 aa17.66■□□□□ 0.42
TMEM40-204ENST00000435218 DDAH1O94760 285 aa17.66■□□□□ 0.42
TMEM40-204ENST00000435218 CALM1P0DP23 149 aa17.66■□□□□ 0.42
TMEM40-204ENST00000435218 CALM2P0DP24 149 aa17.66■□□□□ 0.42
TMEM40-204ENST00000435218 CALM3P0DP25 149 aa17.66■□□□□ 0.42
TMEM40-204ENST00000435218 METAP2P50579 478 aaKnown RBP eCLIP17.66■□□□□ 0.42
TMEM40-204ENST00000435218 HMGN5P82970 282 aaKnown RBP17.66■□□□□ 0.42
TMEM40-204ENST00000435218 NSUN7Q8NE18 718 aaKnown RBP17.66■□□□□ 0.42
TMEM40-204ENST00000435218 L3MBTL3Q96JM7 780 aaPredicted RBP17.66■□□□□ 0.42
TMEM40-204ENST00000435218 NMT2O60551 498 aa17.65■□□□□ 0.42
TMEM40-204ENST00000435218 DDNO94850 711 aaPredicted RBP17.65■□□□□ 0.42
TMEM40-204ENST00000435218 CTDNEP1O95476 244 aa17.65■□□□□ 0.42
TMEM40-204ENST00000435218 GJB2P29033 226 aa17.65■□□□□ 0.42
TMEM40-204ENST00000435218 CCT2P78371 535 aaKnown RBP17.65■□□□□ 0.42
TMEM40-204ENST00000435218 MAP3K10Q02779 954 aa17.65■□□□□ 0.42
TMEM40-204ENST00000435218 TBC1D10BQ4KMP7 808 aaPredicted RBP17.65■□□□□ 0.42
TMEM40-204ENST00000435218 PPP4R3BQ5MIZ7 849 aa17.65■□□□□ 0.42
TMEM40-204ENST00000435218 MAP3K14Q99558 947 aa17.65■□□□□ 0.42
TMEM40-204ENST00000435218 NAP1L2Q9ULW6 460 aaPredicted RBP17.65■□□□□ 0.42
TMEM40-204ENST00000435218 MYH15Q9Y2K3 1946 aa17.65■□□□□ 0.42
TMEM40-204ENST00000435218 UTRNP46939 3433 aa17.64■□□□□ 0.42
TMEM40-204ENST00000435218 TROAPQ12815 778 aa17.64■□□□□ 0.41
TMEM40-204ENST00000435218 RAB3GAP1Q15042 981 aa17.64■□□□□ 0.41
TMEM40-204ENST00000435218 DPY19L2Q6NUT2 758 aa17.64■□□□□ 0.41
TMEM40-204ENST00000435218 CATIPQ7Z7H3 387 aa17.64■□□□□ 0.41
TMEM40-204ENST00000435218 MICU3Q86XE3 530 aa17.64■□□□□ 0.41
TMEM40-204ENST00000435218 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.64■□□□□ 0.41
TMEM40-204ENST00000435218 NCOA5Q9HCD5 579 aaKnown RBP17.64■□□□□ 0.41
TMEM40-204ENST00000435218 HACL1Q9UJ83 578 aa17.64■□□□□ 0.41
TMEM40-204ENST00000435218 PITPNM2Q9BZ72 1349 aa17.64■□□□□ 0.41
TMEM40-204ENST00000435218 CCDC196A0A1B0GTZ2 297 aa17.63■□□□□ 0.41
TMEM40-204ENST00000435218 GOLGA8AA7E2F4 631 aa17.63■□□□□ 0.41
TMEM40-204ENST00000435218 AKR1B1P15121 316 aa17.63■□□□□ 0.41
TMEM40-204ENST00000435218 LMOD1P29536 600 aaPredicted RBP17.63■□□□□ 0.41
TMEM40-204ENST00000435218 EPS15P42566 896 aa17.63■□□□□ 0.41
TMEM40-204ENST00000435218 RBM26Q5T8P6 1007 aaKnown RBP17.63■□□□□ 0.41
TMEM40-204ENST00000435218 APOBEC3FQ8IUX4 373 aaKnown RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms