RNA–Protein interactions for RNA: ENST00000435201.5

LIMK1-203, Transcript of LIM domain kinase 1, humanhuman

TSL 1 (best)

Gene LIMK1, Length 1,883 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-203ENST00000435201 SMIM22K7EJ46 135 aa19.28■□□□□ 0.68
LIMK1-203ENST00000435201 NOLC1Q14978 699 aaKnown RBP eCLIP19.28■□□□□ 0.68
LIMK1-203ENST00000435201 SHC4Q6S5L8 630 aa19.28■□□□□ 0.68
LIMK1-203ENST00000435201 C15orf52Q6ZUT6 534 aaKnown RBP19.28■□□□□ 0.68
LIMK1-203ENST00000435201 ZNF804AQ7Z570 1209 aa19.28■□□□□ 0.68
LIMK1-203ENST00000435201 MRFAP1L1Q96HT8 127 aa19.28■□□□□ 0.68
LIMK1-203ENST00000435201 KCNF1Q9H3M0 494 aa19.28■□□□□ 0.68
LIMK1-203ENST00000435201 KCNJ14Q9UNX9 436 aa19.28■□□□□ 0.68
LIMK1-203ENST00000435201 PRPF3O43395 683 aaKnown RBP19.27■□□□□ 0.68
LIMK1-203ENST00000435201 PRDM1O75626 825 aa19.27■□□□□ 0.68
LIMK1-203ENST00000435201 PDE4BQ07343 736 aa19.27■□□□□ 0.68
LIMK1-203ENST00000435201 PRR5LQ6MZQ0 368 aa19.27■□□□□ 0.68
LIMK1-203ENST00000435201 CCDC82Q8N4S0 544 aa19.27■□□□□ 0.68
LIMK1-203ENST00000435201 KRI1Q8N9T8 703 aaKnown RBP19.27■□□□□ 0.68
LIMK1-203ENST00000435201 CERKQ8TCT0 537 aa19.27■□□□□ 0.68
LIMK1-203ENST00000435201 SPTLC3Q9NUV7 552 aa19.27■□□□□ 0.68
LIMK1-203ENST00000435201 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.26■□□□□ 0.67
LIMK1-203ENST00000435201 LDHBP07195 334 aaKnown RBP19.26■□□□□ 0.67
LIMK1-203ENST00000435201 NLRP12P59046 1061 aa19.26■□□□□ 0.67
LIMK1-203ENST00000435201 GSTO1P78417 241 aa19.26■□□□□ 0.67
LIMK1-203ENST00000435201 TROAPQ12815 778 aa19.26■□□□□ 0.67
LIMK1-203ENST00000435201 CMTR1Q8N1G2 835 aaKnown RBP19.26■□□□□ 0.67
LIMK1-203ENST00000435201 RPGRQ92834 1020 aaKnown RBP19.26■□□□□ 0.67
LIMK1-203ENST00000435201 LRRC4BQ9NT99 713 aa19.26■□□□□ 0.67
LIMK1-203ENST00000435201 CEP131Q9UPN4 1083 aa19.26■□□□□ 0.67
LIMK1-203ENST00000435201 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.26■□□□□ 0.67
LIMK1-203ENST00000435201 ST5P78524 1137 aa19.26■□□□□ 0.67
LIMK1-203ENST00000435201 ERCC4Q92889 916 aaPredicted RBP19.26■□□□□ 0.67
LIMK1-203ENST00000435201 TOB1P50616 345 aaPredicted RBP19.25■□□□□ 0.67
LIMK1-203ENST00000435201 FUT2Q10981 343 aa19.25■□□□□ 0.67
LIMK1-203ENST00000435201 SLC27A3Q5K4L6 730 aa19.25■□□□□ 0.67
LIMK1-203ENST00000435201 KIAA1524Q8TCG1 905 aa19.25■□□□□ 0.67
LIMK1-203ENST00000435201 CLIP2Q9UDT6 1046 aa19.25■□□□□ 0.67
LIMK1-203ENST00000435201 R3HCC1Q9Y3T6 440 aaKnown RBP19.25■□□□□ 0.67
LIMK1-203ENST00000435201 PTGS1P23219 599 aa19.24■□□□□ 0.67
LIMK1-203ENST00000435201 CRY2Q49AN0 593 aa19.24■□□□□ 0.67
LIMK1-203ENST00000435201 TMTC3Q6ZXV5 915 aa19.24■□□□□ 0.67
LIMK1-203ENST00000435201 CCDC186Q7Z3E2 898 aa19.24■□□□□ 0.67
LIMK1-203ENST00000435201 ELOA2Q8IYF1 753 aaPredicted RBP19.24■□□□□ 0.67
LIMK1-203ENST00000435201 AOPEPQ8N6M6 819 aa19.24■□□□□ 0.67
LIMK1-203ENST00000435201 MORC2Q9Y6X9 1032 aaPredicted RBP19.24■□□□□ 0.67
LIMK1-203ENST00000435201 DPCR1Q3MIW9 517 aa19.24■□□□□ 0.67
LIMK1-203ENST00000435201 CTCFLQ8NI51 663 aaPredicted RBP19.24■□□□□ 0.67
LIMK1-203ENST00000435201 TUBE1Q9UJT0 475 aa19.24■□□□□ 0.67
LIMK1-203ENST00000435201 JAG2Q9Y219 1238 aa19.24■□□□□ 0.67
LIMK1-203ENST00000435201 NAV1Q8NEY1 1877 aa19.23■□□□□ 0.67
LIMK1-203ENST00000435201 A0A087WWV3 80 aa19.23■□□□□ 0.67
LIMK1-203ENST00000435201 BAG3O95817 575 aa19.23■□□□□ 0.67
LIMK1-203ENST00000435201 GYS1P13807 737 aa19.23■□□□□ 0.67
LIMK1-203ENST00000435201 PKN1Q16512 942 aa19.23■□□□□ 0.67
LIMK1-203ENST00000435201 CERS3Q8IU89 383 aa19.23■□□□□ 0.67
LIMK1-203ENST00000435201 RBM17Q96I25 401 aaKnown RBP19.23■□□□□ 0.67
LIMK1-203ENST00000435201 CLIC6Q96NY7 704 aa19.23■□□□□ 0.67
LIMK1-203ENST00000435201 NOL10Q9BSC4 688 aaKnown RBP19.23■□□□□ 0.67
LIMK1-203ENST00000435201 MCM9Q9NXL9 1143 aa19.23■□□□□ 0.67
LIMK1-203ENST00000435201 KCNH3Q9ULD8 1083 aa19.23■□□□□ 0.67
LIMK1-203ENST00000435201 ROBO3Q96MS0 1386 aa19.23■□□□□ 0.67
LIMK1-203ENST00000435201 PLEKHA8P1O95397 391 aa19.22■□□□□ 0.67
LIMK1-203ENST00000435201 LDHCP07864 332 aa19.22■□□□□ 0.67
LIMK1-203ENST00000435201 PTPREP23469 700 aa19.22■□□□□ 0.67
LIMK1-203ENST00000435201 ATP2B4P23634 1241 aa19.22■□□□□ 0.67
LIMK1-203ENST00000435201 KRT2P35908 639 aa19.22■□□□□ 0.67
LIMK1-203ENST00000435201 TPM4P67936 248 aa19.22■□□□□ 0.67
LIMK1-203ENST00000435201 NR5A1Q13285 461 aa19.22■□□□□ 0.67
LIMK1-203ENST00000435201 AMOTL1Q8IY63 956 aa19.22■□□□□ 0.67
LIMK1-203ENST00000435201 ZNF579Q8NAF0 562 aaKnown RBP19.22■□□□□ 0.67
LIMK1-203ENST00000435201 PHF20Q9BVI0 1012 aa19.22■□□□□ 0.67
LIMK1-203ENST00000435201 BRMS1Q9HCU9 246 aa19.22■□□□□ 0.67
LIMK1-203ENST00000435201 FAM13BQ9NYF5 915 aa19.22■□□□□ 0.67
LIMK1-203ENST00000435201 TSPY2A6NKD2 308 aa19.22■□□□□ 0.67
LIMK1-203ENST00000435201 CYP2D6P10635 497 aa19.22■□□□□ 0.67
LIMK1-203ENST00000435201 USP5P45974 858 aa19.22■□□□□ 0.67
LIMK1-203ENST00000435201 PPP4CP60510 307 aa19.22■□□□□ 0.67
LIMK1-203ENST00000435201 ANO8Q9HCE9 1232 aaPredicted RBP19.22■□□□□ 0.67
LIMK1-203ENST00000435201 MKRN1Q9UHC7 482 aaKnown RBP19.22■□□□□ 0.67
LIMK1-203ENST00000435201 HOOK1Q9UJC3 728 aaKnown RBP19.22■□□□□ 0.67
LIMK1-203ENST00000435201 FBXO2Q9UK22 296 aaPredicted RBP19.22■□□□□ 0.67
LIMK1-203ENST00000435201 PYCARDQ9ULZ3 195 aa19.22■□□□□ 0.67
LIMK1-203ENST00000435201 CNTNAP5Q8WYK1 1306 aa19.21■□□□□ 0.67
LIMK1-203ENST00000435201 SMTNL1A8MU46 457 aa19.21■□□□□ 0.67
LIMK1-203ENST00000435201 SERPINB2P05120 415 aa19.21■□□□□ 0.67
LIMK1-203ENST00000435201 HMGB2P26583 209 aaKnown RBP19.21■□□□□ 0.67
LIMK1-203ENST00000435201 GPSM2P81274 684 aa19.21■□□□□ 0.67
LIMK1-203ENST00000435201 DNTTIP2Q5QJE6 756 aaKnown RBP19.21■□□□□ 0.67
LIMK1-203ENST00000435201 C12orf60Q5U649 245 aa19.21■□□□□ 0.67
LIMK1-203ENST00000435201 KRBA2Q6ZNG9 492 aa19.21■□□□□ 0.67
LIMK1-203ENST00000435201 OXER1Q8TDS5 423 aa19.21■□□□□ 0.67
LIMK1-203ENST00000435201 FBXW7Q969H0 707 aa19.21■□□□□ 0.67
LIMK1-203ENST00000435201 VPS54Q9P1Q0 977 aa19.21■□□□□ 0.67
LIMK1-203ENST00000435201 V9GY48 417 aaPredicted RBP19.21■□□□□ 0.67
LIMK1-203ENST00000435201 CCDC178Q5BJE1 867 aa19.2■□□□□ 0.66
LIMK1-203ENST00000435201 FAM47AQ5JRC9 791 aa19.2■□□□□ 0.66
LIMK1-203ENST00000435201 CNNM3Q8NE01 707 aa19.2■□□□□ 0.66
LIMK1-203ENST00000435201 CABP5Q9NP86 173 aa19.2■□□□□ 0.66
LIMK1-203ENST00000435201 PCDHB6Q9Y5E3 794 aa19.2■□□□□ 0.66
LIMK1-203ENST00000435201 SRPRBQ9Y5M8 271 aaKnown RBP19.2■□□□□ 0.66
LIMK1-203ENST00000435201 NEMFO60524 1076 aa19.2■□□□□ 0.66
LIMK1-203ENST00000435201 USP17L8P0C7I0 530 aa19.2■□□□□ 0.66
LIMK1-203ENST00000435201 KIF5BP33176 963 aa19.2■□□□□ 0.66
LIMK1-203ENST00000435201 EVX2Q03828 476 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms