RNA–Protein interactions for RNA: ENST00000433972.1

RPUSD3-208, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-208ENST00000433972 ELNP15502 786 aa18.1■□□□□ 0.49
RPUSD3-208ENST00000433972 ADGRA1Q86SQ6 560 aa18.1■□□□□ 0.49
RPUSD3-208ENST00000433972 UNC93B1Q9H1C4 597 aa18.1■□□□□ 0.49
RPUSD3-208ENST00000433972 MORF4L1Q9UBU8 362 aa18.1■□□□□ 0.49
RPUSD3-208ENST00000433972 ZBTB21Q9ULJ3 1066 aa18.1■□□□□ 0.49
RPUSD3-208ENST00000433972 PHIPQ8WWQ0 1821 aa18.09■□□□□ 0.49
RPUSD3-208ENST00000433972 H0YGN5 161 aa18.09■□□□□ 0.49
RPUSD3-208ENST00000433972 HMMRO75330 724 aa18.09■□□□□ 0.49
RPUSD3-208ENST00000433972 TFRCP02786 760 aaKnown RBP18.09■□□□□ 0.49
RPUSD3-208ENST00000433972 HMGCRP04035 888 aa18.09■□□□□ 0.49
RPUSD3-208ENST00000433972 RRP1BQ14684 758 aaKnown RBP18.09■□□□□ 0.49
RPUSD3-208ENST00000433972 UBE2Q1Q7Z7E8 422 aa18.09■□□□□ 0.49
RPUSD3-208ENST00000433972 TTC6Q86TZ1 520 aa18.09■□□□□ 0.49
RPUSD3-208ENST00000433972 AACSQ86V21 672 aa18.09■□□□□ 0.49
RPUSD3-208ENST00000433972 MAGEB6Q8N7X4 407 aa18.09■□□□□ 0.49
RPUSD3-208ENST00000433972 EHD4Q9H223 541 aa18.09■□□□□ 0.49
RPUSD3-208ENST00000433972 TLR7Q9NYK1 1049 aaKnown RBP18.09■□□□□ 0.49
RPUSD3-208ENST00000433972 LOC285556D6RIA3 1793 aa18.09■□□□□ 0.49
RPUSD3-208ENST00000433972 PTPRFP10586 1907 aa18.08■□□□□ 0.49
RPUSD3-208ENST00000433972 CCAR1Q8IX12 1150 aaKnown RBP18.08■□□□□ 0.48
RPUSD3-208ENST00000433972 CLASRPQ8N2M8 674 aaKnown RBP18.08■□□□□ 0.48
RPUSD3-208ENST00000433972 GPRC5AQ8NFJ5 357 aa18.08■□□□□ 0.48
RPUSD3-208ENST00000433972 PANK1Q8TE04 598 aa18.08■□□□□ 0.48
RPUSD3-208ENST00000433972 SOCS4Q8WXH5 440 aa18.08■□□□□ 0.48
RPUSD3-208ENST00000433972 DNAJC18Q9H819 358 aa18.08■□□□□ 0.48
RPUSD3-208ENST00000433972 PAK6Q9NQU5 681 aaPredicted RBP18.08■□□□□ 0.48
RPUSD3-208ENST00000433972 SAP30BPQ9UHR5 308 aaKnown RBP18.08■□□□□ 0.48
RPUSD3-208ENST00000433972 SERPINB13Q9UIV8 391 aa18.08■□□□□ 0.48
RPUSD3-208ENST00000433972 EXOC6BQ9Y2D4 811 aa18.08■□□□□ 0.48
RPUSD3-208ENST00000433972 GDF11O95390 407 aa18.07■□□□□ 0.48
RPUSD3-208ENST00000433972 USP14P54578 494 aa18.07■□□□□ 0.48
RPUSD3-208ENST00000433972 HERVK_113P62684 666 aa18.07■□□□□ 0.48
RPUSD3-208ENST00000433972 DYNLL1P63167 89 aaKnown RBP18.07■□□□□ 0.48
RPUSD3-208ENST00000433972 PDE3AQ14432 1141 aa18.07■□□□□ 0.48
RPUSD3-208ENST00000433972 USP17L2Q6R6M4 530 aa18.07■□□□□ 0.48
RPUSD3-208ENST00000433972 RPAP2Q8IXW5 612 aaPredicted RBP18.07■□□□□ 0.48
RPUSD3-208ENST00000433972 TRMT44Q8IYL2 757 aaKnown RBP18.07■□□□□ 0.48
RPUSD3-208ENST00000433972 MIGA1Q8NAN2 632 aa18.07■□□□□ 0.48
RPUSD3-208ENST00000433972 DEFB118Q96PH6 123 aa18.07■□□□□ 0.48
RPUSD3-208ENST00000433972 DDX19BQ9UMR2 479 aa18.07■□□□□ 0.48
RPUSD3-208ENST00000433972 COLQQ9Y215 455 aaPredicted RBP18.07■□□□□ 0.48
RPUSD3-208ENST00000433972 MAPK4P31152 587 aa18.06■□□□□ 0.48
RPUSD3-208ENST00000433972 TATDN1Q6P1N9 297 aa18.06■□□□□ 0.48
RPUSD3-208ENST00000433972 ANKLE1Q8NAG6 615 aa18.06■□□□□ 0.48
RPUSD3-208ENST00000433972 KIF1BPQ96EK5 621 aa18.06■□□□□ 0.48
RPUSD3-208ENST00000433972 FEZ1Q99689 392 aa18.06■□□□□ 0.48
RPUSD3-208ENST00000433972 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.06■□□□□ 0.48
RPUSD3-208ENST00000433972 CABP5Q9NP86 173 aa18.06■□□□□ 0.48
RPUSD3-208ENST00000433972 MGAMO43451 1857 aa18.05■□□□□ 0.48
RPUSD3-208ENST00000433972 RPTORQ8N122 1335 aa18.05■□□□□ 0.48
RPUSD3-208ENST00000433972 GH2P01242 217 aa18.05■□□□□ 0.48
RPUSD3-208ENST00000433972 RHPN1Q8TCX5 695 aa18.05■□□□□ 0.48
RPUSD3-208ENST00000433972 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.05■□□□□ 0.48
RPUSD3-208ENST00000433972 P2RX7Q99572 595 aaKnown RBP18.05■□□□□ 0.48
RPUSD3-208ENST00000433972 NUDT12Q9BQG2 462 aa18.05■□□□□ 0.48
RPUSD3-208ENST00000433972 CRISPLD2Q9H0B8 497 aa18.05■□□□□ 0.48
RPUSD3-208ENST00000433972 HMX1Q9NP08 348 aaPredicted RBP18.05■□□□□ 0.48
RPUSD3-208ENST00000433972 IFIT2P09913 472 aaKnown RBP18.04■□□□□ 0.48
RPUSD3-208ENST00000433972 XRCC5P13010 732 aaKnown RBP18.04■□□□□ 0.48
RPUSD3-208ENST00000433972 CERKLQ49MI3 558 aaPredicted RBP18.04■□□□□ 0.48
RPUSD3-208ENST00000433972 NECAB2Q7Z6G3 386 aa18.04■□□□□ 0.48
RPUSD3-208ENST00000433972 C12orf42Q96LP6 360 aa18.04■□□□□ 0.48
RPUSD3-208ENST00000433972 CRNKL1Q9BZJ0 848 aaKnown RBP18.04■□□□□ 0.48
RPUSD3-208ENST00000433972 CWC22Q9HCG8 908 aaKnown RBP18.04■□□□□ 0.48
RPUSD3-208ENST00000433972 GJD2Q9UKL4 321 aa18.04■□□□□ 0.48
RPUSD3-208ENST00000433972 ATAD5Q96QE3 1844 aa18.03■□□□□ 0.48
RPUSD3-208ENST00000433972 MAGEB6P1A0A0J9YX57 407 aa18.03■□□□□ 0.48
RPUSD3-208ENST00000433972 EVI5O60447 810 aa18.03■□□□□ 0.48
RPUSD3-208ENST00000433972 RAB11FIP3O75154 756 aa18.03■□□□□ 0.48
RPUSD3-208ENST00000433972 GLRX3O76003 335 aaKnown RBP18.03■□□□□ 0.48
RPUSD3-208ENST00000433972 POLR3DP05423 398 aaPredicted RBP18.03■□□□□ 0.48
RPUSD3-208ENST00000433972 FXR1P51114 621 aaKnown RBP eCLIP18.03■□□□□ 0.48
RPUSD3-208ENST00000433972 ERVK-9P63128 1117 aa18.03■□□□□ 0.48
RPUSD3-208ENST00000433972 ERVK-24P63145 666 aa18.03■□□□□ 0.48
RPUSD3-208ENST00000433972 CCNA1P78396 465 aa18.03■□□□□ 0.48
RPUSD3-208ENST00000433972 ABCB5Q2M3G0 1257 aa18.03■□□□□ 0.48
RPUSD3-208ENST00000433972 CHRDL2Q6WN34 429 aa18.03■□□□□ 0.48
RPUSD3-208ENST00000433972 ANTXR1Q9H6X2 564 aa18.03■□□□□ 0.48
RPUSD3-208ENST00000433972 IL1RAPL2Q9NP60 686 aa18.03■□□□□ 0.48
RPUSD3-208ENST00000433972 COG6Q9Y2V7 657 aa18.03■□□□□ 0.48
RPUSD3-208ENST00000433972 USP17L15C9J2P7 530 aa18.02■□□□□ 0.48
RPUSD3-208ENST00000433972 USP17L13C9JLJ4 530 aa18.02■□□□□ 0.48
RPUSD3-208ENST00000433972 USP17L11C9JVI0 530 aa18.02■□□□□ 0.48
RPUSD3-208ENST00000433972 USP17L18D6R9N7 530 aa18.02■□□□□ 0.48
RPUSD3-208ENST00000433972 USP17L22D6RA61 530 aa18.02■□□□□ 0.48
RPUSD3-208ENST00000433972 USP17L17D6RBQ6 530 aa18.02■□□□□ 0.48
RPUSD3-208ENST00000433972 USP17L19D6RCP7 530 aa18.02■□□□□ 0.48
RPUSD3-208ENST00000433972 USP17L20D6RJB6 530 aa18.02■□□□□ 0.48
RPUSD3-208ENST00000433972 USP17L24Q0WX57 530 aa18.02■□□□□ 0.48
RPUSD3-208ENST00000433972 RAB3GAP1Q15042 981 aa18.02■□□□□ 0.48
RPUSD3-208ENST00000433972 SLC9C2Q5TAH2 1124 aa18.02■□□□□ 0.48
RPUSD3-208ENST00000433972 RIOK1Q9BRS2 568 aaKnown RBP18.02■□□□□ 0.48
RPUSD3-208ENST00000433972 KIAA1683Q9H0B3 1180 aa18.02■□□□□ 0.48
RPUSD3-208ENST00000433972 FOCADQ5VW36 1801 aa18.01■□□□□ 0.47
RPUSD3-208ENST00000433972 RGS2P41220 211 aa18.01■□□□□ 0.47
RPUSD3-208ENST00000433972 JAG1P78504 1218 aa18.01■□□□□ 0.47
RPUSD3-208ENST00000433972 PAGR1Q9BTK6 254 aa18.01■□□□□ 0.47
RPUSD3-208ENST00000433972 EMILIN3Q9NT22 766 aa18.01■□□□□ 0.47
RPUSD3-208ENST00000433972 RABGAP1Q9Y3P9 1069 aa18.01■□□□□ 0.47
RPUSD3-208ENST00000433972 NDUFB9Q9Y6M9 179 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms