RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 ZRSR2Q15696 482 aaKnown RBP4.25□□□□□ -1.73
SHPRH-205ENST00000433355 CCDC170Q8IYT3 715 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 TPCN1Q9ULQ1 816 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 DOCK2Q92608 1830 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 FOXO3O43524 673 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 CTSWP56202 376 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 WHAMMP3Q1A5X7 153 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 TMCO3Q6UWJ1 677 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 RNF214Q8ND24 703 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 FOXP3Q9BZS1 431 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 PLIN4Q96Q06 1357 aa4.25□□□□□ -1.73
SHPRH-205ENST00000433355 EPS15P42566 896 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 SLMAPQ14BN4 828 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 SECISBP2LQ93073 1101 aaKnown RBP4.24□□□□□ -1.73
SHPRH-205ENST00000433355 FLOT1O75955 427 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 UBA7P41226 1012 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 ASPRV1Q53RT3 343 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 NBPF6Q5VWK0 638 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 NBPF5PQ86XG9 351 aaPredicted RBP4.24□□□□□ -1.73
SHPRH-205ENST00000433355 MYRIPQ8NFW9 859 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 CCHCR1Q8TD31 782 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 NBPF4Q96M43 638 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 MRIQ9BWK5 157 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 TOGARAM1Q9Y4F4 1720 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 SCN7AQ01118 1682 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 FAM237AA0A1B0GTK4 181 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 PDE8BO95263 885 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 CEP135Q66GS9 1140 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 REXO1Q8N1G1 1221 aaKnown RBP4.24□□□□□ -1.73
SHPRH-205ENST00000433355 DAGLBQ8NCG7 672 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 DHX38Q92620 1227 aaKnown RBP4.24□□□□□ -1.73
SHPRH-205ENST00000433355 ZNF496Q96IT1 587 aaPredicted RBP4.24□□□□□ -1.73
SHPRH-205ENST00000433355 CDHR1Q96JP9 859 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 ARFGAP3Q9NP61 516 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 HOMER3Q9NSC5 361 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 MAP3K20Q9NYL2 800 aaKnown RBP4.24□□□□□ -1.73
SHPRH-205ENST00000433355 NR1H3Q13133 447 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 PPFIA1Q13136 1202 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 LDHAL6AQ6ZMR3 332 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 MORC4Q8TE76 937 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 ROBO3Q96MS0 1386 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 A0A1W2PQC6 194 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 AKNAD1Q5T1N1 836 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 FKBP1CQ5VVH2 108 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 ANO1Q5XXA6 986 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 SLFN12Q8IYM2 578 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 LEO1Q8WVC0 666 aaPredicted RBP4.24□□□□□ -1.73
SHPRH-205ENST00000433355 ORC3Q9UBD5 711 aaPredicted RBP4.24□□□□□ -1.73
SHPRH-205ENST00000433355 TAF5LO75529 589 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 ALDH1B1P30837 517 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 FKBP1AP62942 108 aaKnown RBP4.24□□□□□ -1.73
SHPRH-205ENST00000433355 LEKR1Q6ZMV7 388 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 DZIP1Q86YF9 867 aaKnown RBP4.24□□□□□ -1.73
SHPRH-205ENST00000433355 VIPAS39Q9H9C1 493 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 TNKSO95271 1327 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 CTAGE9A4FU28 777 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 SERPINC1P01008 464 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 CNBD1Q8NA66 436 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 IL17REQ8NFR9 667 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 TRIM58Q8NG06 486 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 PANX2Q96RD6 677 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 A0A1B0GUA9 196 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 A0A1B0GVL5 298 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 U2AF2P26368 475 aaKnown RBP eCLIP4.24□□□□□ -1.736e-7■■■■□ 20
SHPRH-205ENST00000433355 VAV2P52735 878 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 NLGN1Q8N2Q7 840 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 NOC2LQ9Y3T9 749 aaKnown RBP4.24□□□□□ -1.73
SHPRH-205ENST00000433355 COL18A1P39060 1754 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 GOLGA8AA7E2F4 631 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 SLU7O95391 586 aaKnown RBP4.24□□□□□ -1.73
SHPRH-205ENST00000433355 ATP5DP30049 168 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 YWHAEP62258 255 aaKnown RBP4.24□□□□□ -1.73
SHPRH-205ENST00000433355 NECTIN1Q15223 517 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 ARMC3Q5W041 872 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 PPP4R3AQ6IN85 833 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 COPS6Q7L5N1 327 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 PODNQ7Z5L7 613 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 NEK9Q8TD19 979 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 JPH2Q9BR39 696 aaPredicted RBP4.24□□□□□ -1.73
SHPRH-205ENST00000433355 SPZ1Q9BXG8 430 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 LMBRD1Q9NUN5 540 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 TBX3O15119 743 aa4.24□□□□□ -1.73
SHPRH-205ENST00000433355 SYN2Q92777 582 aaPredicted RBP4.24□□□□□ -1.73
SHPRH-205ENST00000433355 DIS3Q9Y2L1 958 aaKnown RBP4.24□□□□□ -1.73
SHPRH-205ENST00000433355 MYH1P12882 1939 aa4.23□□□□□ -1.73
SHPRH-205ENST00000433355 TARSL2A2RTX5 802 aaKnown RBP4.23□□□□□ -1.73
SHPRH-205ENST00000433355 EFCAB8A8MWE9 144 aa4.23□□□□□ -1.73
SHPRH-205ENST00000433355 PPP1R12AO14974 1030 aaPredicted RBP4.23□□□□□ -1.73
SHPRH-205ENST00000433355 SLFN14P0C7P3 912 aa4.23□□□□□ -1.73
SHPRH-205ENST00000433355 GPR161Q8N6U8 529 aaKnown RBP4.23□□□□□ -1.73
SHPRH-205ENST00000433355 ZNF830Q96NB3 372 aaPredicted RBP4.23□□□□□ -1.73
SHPRH-205ENST00000433355 PSMD1Q99460 953 aa4.23□□□□□ -1.73
SHPRH-205ENST00000433355 USH1CQ9Y6N9 552 aa4.23□□□□□ -1.73
SHPRH-205ENST00000433355 PCBP1Q15365 356 aaKnown RBP eCLIP4.23□□□□□ -1.73
SHPRH-205ENST00000433355 MAIP1Q8WWC4 291 aa4.23□□□□□ -1.73
SHPRH-205ENST00000433355 ZNF335Q9H4Z2 1342 aaPredicted RBP4.23□□□□□ -1.73
SHPRH-205ENST00000433355 RIC8AQ9NPQ8 531 aa4.23□□□□□ -1.73
SHPRH-205ENST00000433355 KAT6AQ92794 2004 aa4.23□□□□□ -1.73
SHPRH-205ENST00000433355 COBLL1Q53SF7 1204 aa4.23□□□□□ -1.73
SHPRH-205ENST00000433355 SPECC1LQ69YQ0 1117 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms