RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 FAM47AQ5JRC9 791 aa31.16■■■□□ 2.58
TMEM248-205ENST00000433271 IQCA1Q86XH1 822 aa31.16■■■□□ 2.58
TMEM248-205ENST00000433271 IGDCC4Q8TDY8 1250 aa31.16■■■□□ 2.58
TMEM248-205ENST00000433271 UBAC1Q9BSL1 405 aa31.16■■■□□ 2.58
TMEM248-205ENST00000433271 TATDN1Q6P1N9 297 aa31.16■■■□□ 2.58
TMEM248-205ENST00000433271 TSPY3P0CV98 308 aa31.15■■■□□ 2.58
TMEM248-205ENST00000433271 TSPY8P0CW00 308 aa31.15■■■□□ 2.58
TMEM248-205ENST00000433271 SLURP2P0DP57 97 aa31.15■■■□□ 2.58
TMEM248-205ENST00000433271 MAP3K10Q02779 954 aa31.15■■■□□ 2.58
TMEM248-205ENST00000433271 XPO5Q9HAV4 1204 aaKnown RBP eCLIP31.15■■■□□ 2.58
TMEM248-205ENST00000433271 ANGEL1Q9UNK9 670 aaKnown RBP31.15■■■□□ 2.58
TMEM248-205ENST00000433271 LIMCH1Q9UPQ0 1083 aa31.15■■■□□ 2.58
TMEM248-205ENST00000433271 FAM196BA6NMK8 535 aa31.14■■■□□ 2.58
TMEM248-205ENST00000433271 K7ELQ4 463 aaPredicted RBP31.14■■■□□ 2.58
TMEM248-205ENST00000433271 IFIT3O14879 490 aaKnown RBP31.14■■■□□ 2.58
TMEM248-205ENST00000433271 VEGFAP15692 232 aaPredicted RBP31.14■■■□□ 2.58
TMEM248-205ENST00000433271 BRF1Q92994 677 aa31.14■■■□□ 2.58
TMEM248-205ENST00000433271 ZSCAN10Q96SZ4 725 aaPredicted RBP31.14■■■□□ 2.58
TMEM248-205ENST00000433271 SH2B2O14492 632 aaPredicted RBP31.13■■■□□ 2.57
TMEM248-205ENST00000433271 EAPPQ56P03 285 aaPredicted RBP31.13■■■□□ 2.57
TMEM248-205ENST00000433271 TMEM67Q5HYA8 995 aa31.13■■■□□ 2.57
TMEM248-205ENST00000433271 SULF1Q8IWU6 871 aa31.13■■■□□ 2.57
TMEM248-205ENST00000433271 NEDD1Q8NHV4 660 aa31.13■■■□□ 2.57
TMEM248-205ENST00000433271 CCDC17Q96LX7 622 aa31.13■■■□□ 2.57
TMEM248-205ENST00000433271 ZKSCAN3Q9BRR0 538 aa31.13■■■□□ 2.57
TMEM248-205ENST00000433271 ERICH2A1L162 156 aa31.13■■■□□ 2.57
TMEM248-205ENST00000433271 NOL8Q76FK4 1167 aaKnown RBP31.13■■■□□ 2.57
TMEM248-205ENST00000433271 IPO9Q96P70 1041 aaKnown RBP31.13■■■□□ 2.57
TMEM248-205ENST00000433271 RRAGCQ9HB90 399 aa31.13■■■□□ 2.57
TMEM248-205ENST00000433271 GPHNQ9NQX3 736 aaPredicted RBP31.13■■■□□ 2.57
TMEM248-205ENST00000433271 TCP11L1Q9NUJ3 509 aa31.13■■■□□ 2.57
TMEM248-205ENST00000433271 LIFRP42702 1097 aa31.12■■■□□ 2.57
TMEM248-205ENST00000433271 HOOK2Q96ED9 719 aa31.12■■■□□ 2.57
TMEM248-205ENST00000433271 LARP6Q9BRS8 491 aaKnown RBP31.12■■■□□ 2.57
TMEM248-205ENST00000433271 POLR2AP24928 1970 aaKnown RBP31.12■■■□□ 2.57
TMEM248-205ENST00000433271 CERKLQ49MI3 558 aaPredicted RBP31.11■■■□□ 2.57
TMEM248-205ENST00000433271 CCDC178Q5BJE1 867 aa31.11■■■□□ 2.57
TMEM248-205ENST00000433271 TNKSO95271 1327 aa31.11■■■□□ 2.57
TMEM248-205ENST00000433271 EVCP57679 992 aa31.1■■■□□ 2.57
TMEM248-205ENST00000433271 SEC23AQ15436 765 aa31.1■■■□□ 2.57
TMEM248-205ENST00000433271 NBPF12Q5TAG4 269 aaPredicted RBP31.1■■■□□ 2.57
TMEM248-205ENST00000433271 MIGA2Q7L4E1 593 aa31.1■■■□□ 2.57
TMEM248-205ENST00000433271 KRT26Q7Z3Y9 468 aa31.1■■■□□ 2.57
TMEM248-205ENST00000433271 TMTC2Q8N394 836 aa31.1■■■□□ 2.57
TMEM248-205ENST00000433271 TMX3Q96JJ7 454 aa31.1■■■□□ 2.57
TMEM248-205ENST00000433271 LY9Q9HBG7 655 aa31.1■■■□□ 2.57
TMEM248-205ENST00000433271 IL17RBQ9NRM6 502 aa31.1■■■□□ 2.57
TMEM248-205ENST00000433271 TPCN1Q9ULQ1 816 aa31.1■■■□□ 2.57
TMEM248-205ENST00000433271 MYH8P13535 1937 aa31.1■■■□□ 2.57
TMEM248-205ENST00000433271 PLIN4Q96Q06 1357 aa31.1■■■□□ 2.57
TMEM248-205ENST00000433271 AKR1B1P15121 316 aa31.09■■■□□ 2.57
TMEM248-205ENST00000433271 WTAPQ15007 396 aa31.09■■■□□ 2.57
TMEM248-205ENST00000433271 SGMS1Q86VZ5 419 aa31.09■■■□□ 2.57
TMEM248-205ENST00000433271 ENAHQ8N8S7 591 aaPredicted RBP31.09■■■□□ 2.57
TMEM248-205ENST00000433271 ZSCAN31Q96LW9 406 aaPredicted RBP31.09■■■□□ 2.57
TMEM248-205ENST00000433271 NMT2O60551 498 aa31.09■■■□□ 2.57
TMEM248-205ENST00000433271 APOBRQ0VD83 1088 aa31.08■■■□□ 2.57
TMEM248-205ENST00000433271 SUPT20HL1Q3ZLR7 823 aa31.08■■■□□ 2.57
TMEM248-205ENST00000433271 PRAMEF18Q5VWM3 479 aa31.08■■■□□ 2.57
TMEM248-205ENST00000433271 GNL3Q9BVP2 549 aaKnown RBP eCLIP31.08■■■□□ 2.57
TMEM248-205ENST00000433271 DGKHQ86XP1 1220 aa31.07■■■□□ 2.56
TMEM248-205ENST00000433271 SH2B1Q9NRF2 756 aaPredicted RBP31.07■■■□□ 2.56
TMEM248-205ENST00000433271 DAXXQ9UER7 740 aaPredicted RBP31.07■■■□□ 2.56
TMEM248-205ENST00000433271 DCAF15Q66K64 600 aa31.06■■■□□ 2.56
TMEM248-205ENST00000433271 SENP2Q9HC62 589 aa31.06■■■□□ 2.56
TMEM248-205ENST00000433271 ANKS1AQ92625 1134 aa31.06■■■□□ 2.56
TMEM248-205ENST00000433271 ZNF274Q96GC6 653 aaPredicted RBP31.06■■■□□ 2.56
TMEM248-205ENST00000433271 BRPF3Q9ULD4 1205 aa31.06■■■□□ 2.56
TMEM248-205ENST00000433271 IGKV6D-41A0A0C4DH26 115 aa31.05■■■□□ 2.56
TMEM248-205ENST00000433271 ADM5C9JUS6 153 aa31.05■■■□□ 2.56
TMEM248-205ENST00000433271 MPHOSPH10O00566 681 aaKnown RBP31.05■■■□□ 2.56
TMEM248-205ENST00000433271 ME3Q16798 604 aa31.05■■■□□ 2.56
TMEM248-205ENST00000433271 ABCB5Q2M3G0 1257 aa31.05■■■□□ 2.56
TMEM248-205ENST00000433271 IFIT1BQ5T764 474 aaKnown RBP31.05■■■□□ 2.56
TMEM248-205ENST00000433271 RCSD1Q6JBY9 416 aa31.05■■■□□ 2.56
TMEM248-205ENST00000433271 NFXL1Q6ZNB6 911 aa31.05■■■□□ 2.56
TMEM248-205ENST00000433271 CLEC11AQ9Y240 323 aa31.05■■■□□ 2.56
TMEM248-205ENST00000433271 PHF20L1A8MW92 1017 aa31.04■■■□□ 2.56
TMEM248-205ENST00000433271 RRP1BQ14684 758 aaKnown RBP31.04■■■□□ 2.56
TMEM248-205ENST00000433271 CDC37L1Q7L3B6 337 aa31.04■■■□□ 2.56
TMEM248-205ENST00000433271 USP48Q86UV5 1035 aa31.04■■■□□ 2.56
TMEM248-205ENST00000433271 CEP95Q96GE4 821 aa31.04■■■□□ 2.56
TMEM248-205ENST00000433271 NMRK2Q9NPI5 230 aa31.04■■■□□ 2.56
TMEM248-205ENST00000433271 KLF18A0A0U1RQI7 1052 aa31.03■■■□□ 2.56
TMEM248-205ENST00000433271 CCDC69A6NI79 296 aa31.03■■■□□ 2.56
TMEM248-205ENST00000433271 NOVP48745 357 aa31.03■■■□□ 2.56
TMEM248-205ENST00000433271 SLC4A3P48751 1232 aa31.03■■■□□ 2.56
TMEM248-205ENST00000433271 TMEM179Q6ZVK1 233 aa31.03■■■□□ 2.56
TMEM248-205ENST00000433271 ZNF526Q8TF50 670 aaPredicted RBP31.03■■■□□ 2.56
TMEM248-205ENST00000433271 MTMR4Q9NYA4 1195 aa31.03■■■□□ 2.56
TMEM248-205ENST00000433271 GDF11O95390 407 aa31.02■■■□□ 2.56
TMEM248-205ENST00000433271 LARGE1O95461 756 aa31.02■■■□□ 2.56
TMEM248-205ENST00000433271 PDIA3P30101 505 aaKnown RBP31.02■■■□□ 2.56
TMEM248-205ENST00000433271 CABP5Q9NP86 173 aa31.02■■■□□ 2.56
TMEM248-205ENST00000433271 SLC12A7Q9Y666 1083 aa31.02■■■□□ 2.56
TMEM248-205ENST00000433271 POTEIP0CG38 1075 aa31.02■■■□□ 2.56
TMEM248-205ENST00000433271 POTEJP0CG39 1038 aa31.02■■■□□ 2.56
TMEM248-205ENST00000433271 PPP4R3BQ5MIZ7 849 aa31.02■■■□□ 2.56
TMEM248-205ENST00000433271 APOA5Q6Q788 366 aa31.02■■■□□ 2.56
TMEM248-205ENST00000433271 ZNF341Q9BYN7 854 aa31.02■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms