RNA–Protein interactions for RNA: ENST00000433224.1

LRRTM1-206, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 4,023 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-206ENST00000433224 LINC00116Q8NCU8 138 aa14.19□□□□□ -0.14
LRRTM1-206ENST00000433224 ZNF274Q96GC6 653 aaPredicted RBP14.19□□□□□ -0.14
LRRTM1-206ENST00000433224 STRBPQ96SI9 672 aaKnown RBP14.19□□□□□ -0.14
LRRTM1-206ENST00000433224 ZSCAN10Q96SZ4 725 aaPredicted RBP14.19□□□□□ -0.14
LRRTM1-206ENST00000433224 GTPBP4Q9BZE4 634 aaKnown RBP14.19□□□□□ -0.14
LRRTM1-206ENST00000433224 ACBD3Q9H3P7 528 aa14.19□□□□□ -0.14
LRRTM1-206ENST00000433224 FAM170AA1A519 330 aa14.18□□□□□ -0.14
LRRTM1-206ENST00000433224 NR5A1Q13285 461 aa14.18□□□□□ -0.14
LRRTM1-206ENST00000433224 SPATA31A1Q5TZJ5 1347 aa14.18□□□□□ -0.14
LRRTM1-206ENST00000433224 RAD17O75943 681 aa14.18□□□□□ -0.14
LRRTM1-206ENST00000433224 TOB2Q14106 344 aaPredicted RBP14.18□□□□□ -0.14
LRRTM1-206ENST00000433224 BMS1Q14692 1282 aaKnown RBP14.18□□□□□ -0.14
LRRTM1-206ENST00000433224 NFIXQ14938 502 aa14.18□□□□□ -0.14
LRRTM1-206ENST00000433224 ELF2Q15723 593 aa14.18□□□□□ -0.14
LRRTM1-206ENST00000433224 KIF4BQ2VIQ3 1234 aa14.18□□□□□ -0.14
LRRTM1-206ENST00000433224 TBC1D10CQ8IV04 446 aa14.18□□□□□ -0.14
LRRTM1-206ENST00000433224 NLGN1Q8N2Q7 840 aa14.18□□□□□ -0.14
LRRTM1-206ENST00000433224 SMARCC2Q8TAQ2 1214 aa14.18□□□□□ -0.14
LRRTM1-206ENST00000433224 NARFQ9UHQ1 456 aa14.18□□□□□ -0.14
LRRTM1-206ENST00000433224 ZSCAN12O43309 604 aa14.18□□□□□ -0.14
LRRTM1-206ENST00000433224 CASQ1P31415 396 aa14.18□□□□□ -0.14
LRRTM1-206ENST00000433224 SLC1A4P43007 532 aa14.18□□□□□ -0.14
LRRTM1-206ENST00000433224 PTPN21Q16825 1174 aa14.18□□□□□ -0.14
LRRTM1-206ENST00000433224 RABL6Q3YEC7 729 aaPredicted RBP14.18□□□□□ -0.14
LRRTM1-206ENST00000433224 DTHD1Q6ZMT9 781 aa14.18□□□□□ -0.14
LRRTM1-206ENST00000433224 TRMT44Q8IYL2 757 aaKnown RBP14.18□□□□□ -0.14
LRRTM1-206ENST00000433224 RIPOR2Q9Y4F9 1068 aa14.18□□□□□ -0.14
LRRTM1-206ENST00000433224 FAM196BA6NMK8 535 aa14.17□□□□□ -0.14
LRRTM1-206ENST00000433224 CALML3P27482 149 aa14.17□□□□□ -0.14
LRRTM1-206ENST00000433224 MATR3P43243 847 aaKnown RBP eCLIP14.17□□□□□ -0.14
LRRTM1-206ENST00000433224 STOX1Q6ZVD7 989 aa14.17□□□□□ -0.14
LRRTM1-206ENST00000433224 SPICE1Q8N0Z3 855 aa14.17□□□□□ -0.14
LRRTM1-206ENST00000433224 CLSTN2Q9H4D0 955 aa14.17□□□□□ -0.14
LRRTM1-206ENST00000433224 RNF216Q9NWF9 866 aaPredicted RBP14.17□□□□□ -0.14
LRRTM1-206ENST00000433224 MST1RQ04912 1400 aa14.17□□□□□ -0.14
LRRTM1-206ENST00000433224 NMT2O60551 498 aa14.17□□□□□ -0.14
LRRTM1-206ENST00000433224 CDC25AP30304 524 aa14.17□□□□□ -0.14
LRRTM1-206ENST00000433224 FBXO18Q8NFZ0 1043 aa14.17□□□□□ -0.14
LRRTM1-206ENST00000433224 PDLIM2Q96JY6 352 aa14.17□□□□□ -0.14
LRRTM1-206ENST00000433224 HOMER2Q9NSB8 354 aa14.17□□□□□ -0.14
LRRTM1-206ENST00000433224 USP17L3A6NCW0 530 aa14.17□□□□□ -0.14
LRRTM1-206ENST00000433224 USP17L4A6NCW7 530 aa14.17□□□□□ -0.14
LRRTM1-206ENST00000433224 COBLO75128 1261 aa14.17□□□□□ -0.14
LRRTM1-206ENST00000433224 ARID4AP29374 1257 aaPredicted RBP14.17□□□□□ -0.14
LRRTM1-206ENST00000433224 USP17L1Q7RTZ2 530 aa14.17□□□□□ -0.14
LRRTM1-206ENST00000433224 RUFY1Q96T51 708 aa14.17□□□□□ -0.14
LRRTM1-206ENST00000433224 ZNF397Q8NF99 534 aaPredicted RBP14.16□□□□□ -0.14
LRRTM1-206ENST00000433224 BLZF1Q9H2G9 400 aa14.16□□□□□ -0.14
LRRTM1-206ENST00000433224 OGFRQ9NZT2 677 aa14.16□□□□□ -0.14
LRRTM1-206ENST00000433224 XDHP47989 1333 aa14.16□□□□□ -0.14
LRRTM1-206ENST00000433224 CCNT1O60563 726 aaKnown RBP14.16□□□□□ -0.14
LRRTM1-206ENST00000433224 RILPL1Q5EBL4 403 aa14.16□□□□□ -0.14
LRRTM1-206ENST00000433224 PTF1AQ7RTS3 328 aa14.16□□□□□ -0.14
LRRTM1-206ENST00000433224 TEKT1Q969V4 418 aa14.16□□□□□ -0.14
LRRTM1-206ENST00000433224 CHMP2AO43633 222 aa14.16□□□□□ -0.14
LRRTM1-206ENST00000433224 ALDH1B1P30837 517 aa14.16□□□□□ -0.14
LRRTM1-206ENST00000433224 RFX5P48382 616 aaPredicted RBP14.16□□□□□ -0.14
LRRTM1-206ENST00000433224 TTC38Q5R3I4 469 aa14.16□□□□□ -0.14
LRRTM1-206ENST00000433224 KIAA1328Q86T90 577 aa14.16□□□□□ -0.14
LRRTM1-206ENST00000433224 BIN2Q9UBW5 565 aaPredicted RBP14.16□□□□□ -0.14
LRRTM1-206ENST00000433224 PPEF1O14829 653 aaPredicted RBP14.15□□□□□ -0.14
LRRTM1-206ENST00000433224 CACNA2D4Q7Z3S7 1137 aa14.15□□□□□ -0.14
LRRTM1-206ENST00000433224 CCDC150Q8NCX0 1101 aa14.15□□□□□ -0.14
LRRTM1-206ENST00000433224 BSDC1Q9NW68 430 aaPredicted RBP14.15□□□□□ -0.14
LRRTM1-206ENST00000433224 CALCOCO1Q9P1Z2 691 aa14.15□□□□□ -0.14
LRRTM1-206ENST00000433224 PCDHA7Q9UN72 937 aa14.15□□□□□ -0.14
LRRTM1-206ENST00000433224 SPDYE3A6NKU9 549 aa14.15□□□□□ -0.14
LRRTM1-206ENST00000433224 ATP2B4P23634 1241 aa14.15□□□□□ -0.14
LRRTM1-206ENST00000433224 CCT6AP40227 531 aaKnown RBP14.15□□□□□ -0.14
LRRTM1-206ENST00000433224 PNOCQ13519 176 aa14.15□□□□□ -0.14
LRRTM1-206ENST00000433224 CCDC40Q4G0X9 1142 aa14.15□□□□□ -0.14
LRRTM1-206ENST00000433224 TDRD12Q587J7 1177 aaKnown RBP14.15□□□□□ -0.14
LRRTM1-206ENST00000433224 EXOC1Q9NV70 894 aa14.15□□□□□ -0.14
LRRTM1-206ENST00000433224 CLEC11AQ9Y240 323 aa14.15□□□□□ -0.14
LRRTM1-206ENST00000433224 BAG6P46379 1132 aa14.15□□□□□ -0.14
LRRTM1-206ENST00000433224 CLEC4GQ6UXB4 293 aa14.15□□□□□ -0.14
LRRTM1-206ENST00000433224 KLRF2D3W0D1 207 aa14.14□□□□□ -0.15
LRRTM1-206ENST00000433224 ERLIN1O75477 346 aa14.14□□□□□ -0.15
LRRTM1-206ENST00000433224 DDIT3P35638 169 aa14.14□□□□□ -0.15
LRRTM1-206ENST00000433224 LMAN1P49257 510 aa14.14□□□□□ -0.15
LRRTM1-206ENST00000433224 TXNRD1Q16881 649 aa14.14□□□□□ -0.15
LRRTM1-206ENST00000433224 TAF3Q5VWG9 929 aa14.14□□□□□ -0.15
LRRTM1-206ENST00000433224 PAXIP1Q6ZW49 1069 aaPredicted RBP14.14□□□□□ -0.15
LRRTM1-206ENST00000433224 CYB5R4Q7L1T6 521 aa14.14□□□□□ -0.15
LRRTM1-206ENST00000433224 CAMTA2O94983 1202 aa14.14□□□□□ -0.15
LRRTM1-206ENST00000433224 GNA11P29992 359 aa14.14□□□□□ -0.15
LRRTM1-206ENST00000433224 PDE6BP35913 854 aa14.14□□□□□ -0.15
LRRTM1-206ENST00000433224 TRIM28Q13263 835 aaKnown RBP14.14□□□□□ -0.15
LRRTM1-206ENST00000433224 INF2Q27J81 1249 aa14.14□□□□□ -0.15
LRRTM1-206ENST00000433224 RBM28Q9NW13 759 aaKnown RBP14.14□□□□□ -0.15
LRRTM1-206ENST00000433224 KDM6AO15550 1401 aaPredicted RBP14.14□□□□□ -0.15
LRRTM1-206ENST00000433224 PGBD1Q96JS3 809 aa14.14□□□□□ -0.15
LRRTM1-206ENST00000433224 UBN2Q6ZU65 1347 aa14.14□□□□□ -0.15
LRRTM1-206ENST00000433224 MYOM1P52179 1685 aa14.14□□□□□ -0.15
LRRTM1-206ENST00000433224 CPDO75976 1380 aa14.13□□□□□ -0.15
LRRTM1-206ENST00000433224 WTIPA6NIX2 430 aaPredicted RBP14.13□□□□□ -0.15
LRRTM1-206ENST00000433224 C21orf2O43822 256 aa14.13□□□□□ -0.15
LRRTM1-206ENST00000433224 SLC16A2P36021 539 aa14.13□□□□□ -0.15
LRRTM1-206ENST00000433224 NDUFA8P51970 172 aa14.13□□□□□ -0.15
LRRTM1-206ENST00000433224 MCM6Q14566 821 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms