RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 FPGT-TNNI3KV9GXZ4 949 aa11.58□□□□□ -0.56
CDC42-IT1-201ENST00000431803 MAST2Q6P0Q8 1798 aa11.58□□□□□ -0.56
CDC42-IT1-201ENST00000431803 PTPRFP10586 1907 aa11.58□□□□□ -0.56
CDC42-IT1-201ENST00000431803 PHIPQ8WWQ0 1821 aa11.58□□□□□ -0.56
CDC42-IT1-201ENST00000431803 ZBTB7BO15156 539 aaPredicted RBP11.57□□□□□ -0.56
CDC42-IT1-201ENST00000431803 LDHCP07864 332 aa11.57□□□□□ -0.56
CDC42-IT1-201ENST00000431803 BCRP11274 1271 aa11.57□□□□□ -0.56
CDC42-IT1-201ENST00000431803 PRMT2P55345 433 aa11.57□□□□□ -0.56
CDC42-IT1-201ENST00000431803 ATP8B2P98198 1209 aa11.57□□□□□ -0.56
CDC42-IT1-201ENST00000431803 NBPF11Q86T75 865 aa11.57□□□□□ -0.56
CDC42-IT1-201ENST00000431803 FTSJ3Q8IY81 847 aaKnown RBP11.57□□□□□ -0.56
CDC42-IT1-201ENST00000431803 ZNF512BQ96KM6 892 aaPredicted RBP11.57□□□□□ -0.56
CDC42-IT1-201ENST00000431803 TRIM47Q96LD4 638 aa11.57□□□□□ -0.56
CDC42-IT1-201ENST00000431803 PARK7Q99497 189 aaKnown RBP11.57□□□□□ -0.56
CDC42-IT1-201ENST00000431803 NOP58Q9Y2X3 529 aaKnown RBP11.57□□□□□ -0.56
CDC42-IT1-201ENST00000431803 EVI5O60447 810 aa11.56□□□□□ -0.56
CDC42-IT1-201ENST00000431803 CYP2C8P10632 490 aa11.56□□□□□ -0.56
CDC42-IT1-201ENST00000431803 EN2P19622 333 aaPredicted RBP11.56□□□□□ -0.56
CDC42-IT1-201ENST00000431803 PSMC4P43686 418 aa11.56□□□□□ -0.56
CDC42-IT1-201ENST00000431803 FASTKD5Q7L8L6 764 aaKnown RBP11.56□□□□□ -0.56
CDC42-IT1-201ENST00000431803 DBNDD2Q9BQY9 259 aa11.56□□□□□ -0.56
CDC42-IT1-201ENST00000431803 OSBPL5Q9H0X9 879 aaPredicted RBP11.56□□□□□ -0.56
CDC42-IT1-201ENST00000431803 C1orf115Q9H7X2 142 aa11.56□□□□□ -0.56
CDC42-IT1-201ENST00000431803 RAI14Q9P0K7 980 aa11.56□□□□□ -0.56
CDC42-IT1-201ENST00000431803 SRRDQ9UH36 339 aa11.56□□□□□ -0.56
CDC42-IT1-201ENST00000431803 SLC45A1Q9Y2W3 748 aa11.56□□□□□ -0.56
CDC42-IT1-201ENST00000431803 ZBED9Q6R2W3 1325 aa11.56□□□□□ -0.56
CDC42-IT1-201ENST00000431803 FAM196BA6NMK8 535 aa11.55□□□□□ -0.56
CDC42-IT1-201ENST00000431803 SURF6O75683 361 aaKnown RBP11.55□□□□□ -0.56
CDC42-IT1-201ENST00000431803 CAMK2BQ13554 666 aa11.55□□□□□ -0.56
CDC42-IT1-201ENST00000431803 PPP4R3BQ5MIZ7 849 aa11.55□□□□□ -0.56
CDC42-IT1-201ENST00000431803 TTC39AQ5SRH9 613 aa11.55□□□□□ -0.56
CDC42-IT1-201ENST00000431803 DIEXFQ68CQ4 756 aaKnown RBP11.55□□□□□ -0.56
CDC42-IT1-201ENST00000431803 ITPRIPQ8IWB1 547 aa11.55□□□□□ -0.56
CDC42-IT1-201ENST00000431803 SH3TC2Q8TF17 1288 aa11.55□□□□□ -0.56
CDC42-IT1-201ENST00000431803 LRP2BPQ9P2M1 347 aa11.55□□□□□ -0.56
CDC42-IT1-201ENST00000431803 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.55□□□□□ -0.56
CDC42-IT1-201ENST00000431803 DBNLQ9UJU6 430 aaKnown RBP11.55□□□□□ -0.56
CDC42-IT1-201ENST00000431803 SIPA1L1O43166 1804 aa11.54□□□□□ -0.56
CDC42-IT1-201ENST00000431803 TRIM75PA6NK02 468 aa11.54□□□□□ -0.56
CDC42-IT1-201ENST00000431803 IGSF3O75054 1194 aa11.54□□□□□ -0.56
CDC42-IT1-201ENST00000431803 CYP2E1P05181 493 aaPredicted RBP11.54□□□□□ -0.56
CDC42-IT1-201ENST00000431803 OSBPP22059 807 aa11.54□□□□□ -0.56
CDC42-IT1-201ENST00000431803 PBX2P40425 430 aa11.54□□□□□ -0.56
CDC42-IT1-201ENST00000431803 PPP4CP60510 307 aa11.54□□□□□ -0.56
CDC42-IT1-201ENST00000431803 MMRN1Q13201 1228 aa11.54□□□□□ -0.56
CDC42-IT1-201ENST00000431803 OS9Q13438 667 aaPredicted RBP11.54□□□□□ -0.56
CDC42-IT1-201ENST00000431803 CCDC158Q5M9N0 1113 aa11.54□□□□□ -0.56
CDC42-IT1-201ENST00000431803 NAA16Q6N069 864 aaPredicted RBP11.54□□□□□ -0.56
CDC42-IT1-201ENST00000431803 POTEEQ6S8J3 1075 aa11.54□□□□□ -0.56
CDC42-IT1-201ENST00000431803 ADGRA1Q86SQ6 560 aa11.54□□□□□ -0.56
CDC42-IT1-201ENST00000431803 CCDC84Q86UT8 332 aaPredicted RBP11.54□□□□□ -0.56
CDC42-IT1-201ENST00000431803 TEX11Q8IYF3 940 aa11.54□□□□□ -0.56
CDC42-IT1-201ENST00000431803 SH3RF3Q8TEJ3 882 aaPredicted RBP11.54□□□□□ -0.56
CDC42-IT1-201ENST00000431803 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.54□□□□□ -0.56
CDC42-IT1-201ENST00000431803 SNRKQ9NRH2 765 aa11.54□□□□□ -0.56
CDC42-IT1-201ENST00000431803 TLR7Q9NYK1 1049 aaKnown RBP11.54□□□□□ -0.56
CDC42-IT1-201ENST00000431803 LOC285556D6RIA3 1793 aa11.54□□□□□ -0.56
CDC42-IT1-201ENST00000431803 FOCADQ5VW36 1801 aa11.53□□□□□ -0.56
CDC42-IT1-201ENST00000431803 FMNL1O95466 1100 aaPredicted RBP11.53□□□□□ -0.56
CDC42-IT1-201ENST00000431803 HOXD10P28358 340 aa11.53□□□□□ -0.56
CDC42-IT1-201ENST00000431803 RRP1BQ14684 758 aaKnown RBP11.53□□□□□ -0.56
CDC42-IT1-201ENST00000431803 CEP85Q6P2H3 762 aa11.53□□□□□ -0.56
CDC42-IT1-201ENST00000431803 GADL1Q6ZQY3 521 aa11.53□□□□□ -0.56
CDC42-IT1-201ENST00000431803 AATFQ9NY61 560 aaKnown RBP eCLIP11.53□□□□□ -0.56
CDC42-IT1-201ENST00000431803 HERC5Q9UII4 1024 aaKnown RBP11.53□□□□□ -0.56
CDC42-IT1-201ENST00000431803 AGTPBP1Q9UPW5 1226 aa11.53□□□□□ -0.56
CDC42-IT1-201ENST00000431803 MYPNQ86TC9 1320 aa11.53□□□□□ -0.56
CDC42-IT1-201ENST00000431803 ATAD5Q96QE3 1844 aa11.53□□□□□ -0.56
CDC42-IT1-201ENST00000431803 CDK5RAP2Q96SN8 1893 aa11.53□□□□□ -0.56
CDC42-IT1-201ENST00000431803 RANBP2P49792 3224 aaKnown RBP11.52□□□□□ -0.56
CDC42-IT1-201ENST00000431803 BAG3O95817 575 aa11.52□□□□□ -0.57
CDC42-IT1-201ENST00000431803 CAP2P40123 477 aa11.52□□□□□ -0.57
CDC42-IT1-201ENST00000431803 ZAP70P43403 619 aa11.52□□□□□ -0.57
CDC42-IT1-201ENST00000431803 FCGRTP55899 365 aa11.52□□□□□ -0.57
CDC42-IT1-201ENST00000431803 PRKCZQ05513 592 aa11.52□□□□□ -0.57
CDC42-IT1-201ENST00000431803 SLC4A8Q2Y0W8 1093 aa11.52□□□□□ -0.57
CDC42-IT1-201ENST00000431803 METTL16Q86W50 562 aaKnown RBP11.52□□□□□ -0.57
CDC42-IT1-201ENST00000431803 ZNF454Q8N9F8 522 aa11.52□□□□□ -0.57
CDC42-IT1-201ENST00000431803 PROCA1Q8NCQ7 364 aaPredicted RBP11.52□□□□□ -0.57
CDC42-IT1-201ENST00000431803 EAF2Q96CJ1 260 aaPredicted RBP11.52□□□□□ -0.57
CDC42-IT1-201ENST00000431803 NOL10Q9BSC4 688 aaKnown RBP11.52□□□□□ -0.57
CDC42-IT1-201ENST00000431803 TBC1D2Q9BYX2 928 aa11.52□□□□□ -0.57
CDC42-IT1-201ENST00000431803 DHX36Q9H2U1 1008 aaKnown RBP11.52□□□□□ -0.57
CDC42-IT1-201ENST00000431803 PIH1D3Q9NQM4 214 aaKnown RBP11.52□□□□□ -0.57
CDC42-IT1-201ENST00000431803 PI4KBQ9UBF8 816 aa11.52□□□□□ -0.57
CDC42-IT1-201ENST00000431803 MGAMO43451 1857 aa11.52□□□□□ -0.57
CDC42-IT1-201ENST00000431803 MYO5AQ9Y4I1 1855 aaKnown RBP11.52□□□□□ -0.57
CDC42-IT1-201ENST00000431803 FLT1P17948 1338 aa11.52□□□□□ -0.57
CDC42-IT1-201ENST00000431803 MYCP01106 439 aaPredicted RBP11.51□□□□□ -0.57
CDC42-IT1-201ENST00000431803 GRK4P32298 578 aa11.51□□□□□ -0.57
CDC42-IT1-201ENST00000431803 LSM11P83369 360 aaKnown RBP eCLIP11.51□□□□□ -0.57
CDC42-IT1-201ENST00000431803 SPP2Q13103 211 aa11.51□□□□□ -0.57
CDC42-IT1-201ENST00000431803 TREML2Q5T2D2 321 aa11.51□□□□□ -0.57
CDC42-IT1-201ENST00000431803 ZNF280CQ8ND82 737 aa11.51□□□□□ -0.57
CDC42-IT1-201ENST00000431803 RAET1EQ8TD07 263 aa11.51□□□□□ -0.57
CDC42-IT1-201ENST00000431803 PANK1Q8TE04 598 aa11.51□□□□□ -0.57
CDC42-IT1-201ENST00000431803 SMCR8Q8TEV9 937 aaPredicted RBP11.51□□□□□ -0.57
CDC42-IT1-201ENST00000431803 SHISA4Q96DD7 197 aa11.51□□□□□ -0.57
CDC42-IT1-201ENST00000431803 CCDC8Q9H0W5 538 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms