RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 PXYLP1Q8TE99 480 aa16.99■□□□□ 0.31
SEC13-211ENST00000431352 ZNF512BQ96KM6 892 aaPredicted RBP16.99■□□□□ 0.31
SEC13-211ENST00000431352 ZBTB21Q9ULJ3 1066 aa16.99■□□□□ 0.31
SEC13-211ENST00000431352 NOP58Q9Y2X3 529 aaKnown RBP16.99■□□□□ 0.31
SEC13-211ENST00000431352 FOCADQ5VW36 1801 aa16.98■□□□□ 0.31
SEC13-211ENST00000431352 TRIOBPQ9H2D6 2365 aa16.98■□□□□ 0.31
SEC13-211ENST00000431352 SGPL1O95470 568 aa16.98■□□□□ 0.31
SEC13-211ENST00000431352 BACE1P56817 501 aa16.98■□□□□ 0.31
SEC13-211ENST00000431352 SH3D19Q5HYK7 790 aa16.98■□□□□ 0.31
SEC13-211ENST00000431352 CEP85Q6P2H3 762 aa16.98■□□□□ 0.31
SEC13-211ENST00000431352 UBE2Q1Q7Z7E8 422 aa16.98■□□□□ 0.31
SEC13-211ENST00000431352 AACSQ86V21 672 aa16.98■□□□□ 0.31
SEC13-211ENST00000431352 PANK1Q8TE04 598 aa16.98■□□□□ 0.31
SEC13-211ENST00000431352 BCL11AQ9H165 835 aa16.98■□□□□ 0.31
SEC13-211ENST00000431352 USP5P45974 858 aa16.97■□□□□ 0.31
SEC13-211ENST00000431352 WDR18Q9BV38 432 aa16.97■□□□□ 0.31
SEC13-211ENST00000431352 FOXP4Q8IVH2 680 aaPredicted RBP16.96■□□□□ 0.31
SEC13-211ENST00000431352 P2RX7Q99572 595 aaKnown RBP16.96■□□□□ 0.31
SEC13-211ENST00000431352 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.96■□□□□ 0.31
SEC13-211ENST00000431352 ANTXR1Q9H6X2 564 aa16.96■□□□□ 0.31
SEC13-211ENST00000431352 PAK6Q9NQU5 681 aaPredicted RBP16.96■□□□□ 0.31
SEC13-211ENST00000431352 DOCK3Q8IZD9 2030 aa16.96■□□□□ 0.3
SEC13-211ENST00000431352 USP17L10C9JJH3 530 aa16.95■□□□□ 0.3
SEC13-211ENST00000431352 APBB1O00213 710 aa16.95■□□□□ 0.3
SEC13-211ENST00000431352 GH2P01242 217 aa16.95■□□□□ 0.3
SEC13-211ENST00000431352 HMGCRP04035 888 aa16.95■□□□□ 0.3
SEC13-211ENST00000431352 TRIM32Q13049 653 aa16.95■□□□□ 0.3
SEC13-211ENST00000431352 ZYXQ15942 572 aaKnown RBP16.95■□□□□ 0.3
SEC13-211ENST00000431352 FEZ1Q99689 392 aa16.95■□□□□ 0.3
SEC13-211ENST00000431352 PAGR1Q9BTK6 254 aa16.95■□□□□ 0.3
SEC13-211ENST00000431352 TXNRD2Q9NNW7 524 aa16.95■□□□□ 0.3
SEC13-211ENST00000431352 IL1RAPL2Q9NP60 686 aa16.95■□□□□ 0.3
SEC13-211ENST00000431352 NR2E3Q9Y5X4 410 aa16.95■□□□□ 0.3
SEC13-211ENST00000431352 HERVK_113P62684 666 aa16.94■□□□□ 0.3
SEC13-211ENST00000431352 MAP3K12Q12852 859 aa16.94■□□□□ 0.3
SEC13-211ENST00000431352 METTL16Q86W50 562 aaKnown RBP16.94■□□□□ 0.3
SEC13-211ENST00000431352 ERC1Q8IUD2 1116 aa16.94■□□□□ 0.3
SEC13-211ENST00000431352 DIS3LQ8TF46 1054 aaKnown RBP16.94■□□□□ 0.3
SEC13-211ENST00000431352 RBM27Q9P2N5 1060 aaKnown RBP16.94■□□□□ 0.3
SEC13-211ENST00000431352 MORF4L1Q9UBU8 362 aa16.94■□□□□ 0.3
SEC13-211ENST00000431352 C19orf81C9J6K1 198 aa16.93■□□□□ 0.3
SEC13-211ENST00000431352 CYP2B6P20813 491 aa16.93■□□□□ 0.3
SEC13-211ENST00000431352 DIEXFQ68CQ4 756 aaKnown RBP16.93■□□□□ 0.3
SEC13-211ENST00000431352 GPRC5AQ8NFJ5 357 aa16.93■□□□□ 0.3
SEC13-211ENST00000431352 PAWRQ96IZ0 340 aaKnown RBP16.93■□□□□ 0.3
SEC13-211ENST00000431352 GJD2Q9UKL4 321 aa16.93■□□□□ 0.3
SEC13-211ENST00000431352 MYH1P12882 1939 aa16.92■□□□□ 0.3
SEC13-211ENST00000431352 EVI5O60447 810 aa16.92■□□□□ 0.3
SEC13-211ENST00000431352 HOXA7P31268 230 aaPredicted RBP16.92■□□□□ 0.3
SEC13-211ENST00000431352 RAB3GAP1Q15042 981 aa16.92■□□□□ 0.3
SEC13-211ENST00000431352 USP17L2Q6R6M4 530 aa16.92■□□□□ 0.3
SEC13-211ENST00000431352 CCAR1Q8IX12 1150 aaKnown RBP16.92■□□□□ 0.3
SEC13-211ENST00000431352 TRIB2Q92519 343 aa16.92■□□□□ 0.3
SEC13-211ENST00000431352 EMILIN3Q9NT22 766 aa16.92■□□□□ 0.3
SEC13-211ENST00000431352 GINM1Q9NU53 330 aa16.92■□□□□ 0.3
SEC13-211ENST00000431352 SERPINB13Q9UIV8 391 aa16.92■□□□□ 0.3
SEC13-211ENST00000431352 ZBED9Q6R2W3 1325 aa16.92■□□□□ 0.3
SEC13-211ENST00000431352 IGSF3O75054 1194 aa16.91■□□□□ 0.3
SEC13-211ENST00000431352 PDE3AQ14432 1141 aa16.91■□□□□ 0.3
SEC13-211ENST00000431352 CERS3Q8IU89 383 aa16.91■□□□□ 0.3
SEC13-211ENST00000431352 RHPN1Q8TCX5 695 aa16.91■□□□□ 0.3
SEC13-211ENST00000431352 CRISPLD2Q9H0B8 497 aa16.91■□□□□ 0.3
SEC13-211ENST00000431352 CWC22Q9HCG8 908 aaKnown RBP16.91■□□□□ 0.3
SEC13-211ENST00000431352 HMX1Q9NP08 348 aaPredicted RBP16.91■□□□□ 0.3
SEC13-211ENST00000431352 MAGEB6P1A0A0J9YX57 407 aa16.9■□□□□ 0.3
SEC13-211ENST00000431352 ERVK-9P63128 1117 aa16.9■□□□□ 0.3
SEC13-211ENST00000431352 ERVK-24P63145 666 aa16.9■□□□□ 0.3
SEC13-211ENST00000431352 SOCS4Q8WXH5 440 aa16.9■□□□□ 0.3
SEC13-211ENST00000431352 DNAJC2Q99543 621 aaKnown RBP16.9■□□□□ 0.3
SEC13-211ENST00000431352 NUDT12Q9BQG2 462 aa16.9■□□□□ 0.3
SEC13-211ENST00000431352 PORCNQ9H237 461 aa16.9■□□□□ 0.3
SEC13-211ENST00000431352 RBPJLQ9UBG7 517 aa16.9■□□□□ 0.3
SEC13-211ENST00000431352 PLXNB2O15031 1838 aa16.9■□□□□ 0.3
SEC13-211ENST00000431352 RPTORQ8N122 1335 aa16.9■□□□□ 0.3
SEC13-211ENST00000431352 NAV1Q8NEY1 1877 aa16.89■□□□□ 0.29
SEC13-211ENST00000431352 POLR3DP05423 398 aaPredicted RBP16.89■□□□□ 0.29
SEC13-211ENST00000431352 PRKAR2AP13861 404 aaKnown RBP16.89■□□□□ 0.29
SEC13-211ENST00000431352 PDE6AP16499 860 aa16.89■□□□□ 0.29
SEC13-211ENST00000431352 ZKSCAN1P17029 563 aaPredicted RBP16.89■□□□□ 0.29
SEC13-211ENST00000431352 MAPK4P31152 587 aa16.89■□□□□ 0.29
SEC13-211ENST00000431352 ABCB5Q2M3G0 1257 aa16.89■□□□□ 0.29
SEC13-211ENST00000431352 Q3C1V9 767 aa16.89■□□□□ 0.29
SEC13-211ENST00000431352 CERKLQ49MI3 558 aaPredicted RBP16.89■□□□□ 0.29
SEC13-211ENST00000431352 HSP90AB4PQ58FF6 505 aa16.89■□□□□ 0.29
SEC13-211ENST00000431352 WDR78Q5VTH9 848 aa16.89■□□□□ 0.29
SEC13-211ENST00000431352 TATDN1Q6P1N9 297 aa16.89■□□□□ 0.29
SEC13-211ENST00000431352 NECAB2Q7Z6G3 386 aa16.89■□□□□ 0.29
SEC13-211ENST00000431352 TTC6Q86TZ1 520 aa16.89■□□□□ 0.29
SEC13-211ENST00000431352 RIOK1Q9BRS2 568 aaKnown RBP16.89■□□□□ 0.29
SEC13-211ENST00000431352 EHD4Q9H223 541 aa16.89■□□□□ 0.29
SEC13-211ENST00000431352 DDX60LQ5H9U9 1706 aaKnown RBP16.88■□□□□ 0.29
SEC13-211ENST00000431352 GOLIM4O00461 696 aa16.88■□□□□ 0.29
SEC13-211ENST00000431352 PLCD1P51178 756 aa16.88■□□□□ 0.29
SEC13-211ENST00000431352 EVX2Q03828 476 aa16.88■□□□□ 0.29
SEC13-211ENST00000431352 SLC9C2Q5TAH2 1124 aa16.88■□□□□ 0.29
SEC13-211ENST00000431352 GPR142Q7Z601 462 aa16.88■□□□□ 0.29
SEC13-211ENST00000431352 C7orf61Q8IZ16 206 aa16.88■□□□□ 0.29
SEC13-211ENST00000431352 ACER1Q8TDN7 264 aa16.88■□□□□ 0.29
SEC13-211ENST00000431352 GTF3C2Q8WUA4 911 aaPredicted RBP16.88■□□□□ 0.29
SEC13-211ENST00000431352 CABP5Q9NP86 173 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms