RNA–Protein interactions for RNA: ENST00000430858.1

HDAC6-207, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 618 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-207ENST00000430858 RNF113AO15541 343 aaKnown RBP11.81□□□□□ -0.52
HDAC6-207ENST00000430858 PRKAB2O43741 272 aa11.81□□□□□ -0.52
HDAC6-207ENST00000430858 GDF11O95390 407 aa11.81□□□□□ -0.52
HDAC6-207ENST00000430858 GABPAQ06546 454 aa11.81□□□□□ -0.52
HDAC6-207ENST00000430858 CERKLQ49MI3 558 aaPredicted RBP11.81□□□□□ -0.52
HDAC6-207ENST00000430858 SH3D19Q5HYK7 790 aa11.81□□□□□ -0.52
HDAC6-207ENST00000430858 C17orf99Q6UX52 265 aa11.81□□□□□ -0.52
HDAC6-207ENST00000430858 OTOP1Q7RTM1 612 aa11.81□□□□□ -0.52
HDAC6-207ENST00000430858 AMOTL1Q8IY63 956 aa11.81□□□□□ -0.52
HDAC6-207ENST00000430858 EFCC1Q9HA90 598 aa11.81□□□□□ -0.52
HDAC6-207ENST00000430858 STAP2Q9UGK3 403 aa11.81□□□□□ -0.52
HDAC6-207ENST00000430858 SLC4A4Q9Y6R1 1079 aa11.81□□□□□ -0.52
HDAC6-207ENST00000430858 SIPA1L1O43166 1804 aa11.81□□□□□ -0.52
HDAC6-207ENST00000430858 CDK5RAP2Q96SN8 1893 aa11.8□□□□□ -0.52
HDAC6-207ENST00000430858 C19orf81C9J6K1 198 aa11.8□□□□□ -0.52
HDAC6-207ENST00000430858 GH2P01242 217 aa11.8□□□□□ -0.52
HDAC6-207ENST00000430858 IGHDP01880 384 aa11.8□□□□□ -0.52
HDAC6-207ENST00000430858 PDE1AP54750 535 aa11.8□□□□□ -0.52
HDAC6-207ENST00000430858 BACE1P56817 501 aa11.8□□□□□ -0.52
HDAC6-207ENST00000430858 JAG1P78504 1218 aa11.8□□□□□ -0.52
HDAC6-207ENST00000430858 LACTBP83111 547 aaPredicted RBP11.8□□□□□ -0.52
HDAC6-207ENST00000430858 KIF22Q14807 665 aa11.8□□□□□ -0.52
HDAC6-207ENST00000430858 OSBP2Q969R2 916 aa11.8□□□□□ -0.52
HDAC6-207ENST00000430858 STRBPQ96SI9 672 aaKnown RBP11.8□□□□□ -0.52
HDAC6-207ENST00000430858 CABP5Q9NP86 173 aa11.8□□□□□ -0.52
HDAC6-207ENST00000430858 SWAP70Q9UH65 585 aa11.8□□□□□ -0.52
HDAC6-207ENST00000430858 CPA4Q9UI42 421 aa11.8□□□□□ -0.52
HDAC6-207ENST00000430858 PNMA3Q9UL41 463 aa11.8□□□□□ -0.52
HDAC6-207ENST00000430858 HPS5Q9UPZ3 1129 aa11.8□□□□□ -0.52
HDAC6-207ENST00000430858 ADGRA2Q96PE1 1338 aa11.8□□□□□ -0.52
HDAC6-207ENST00000430858 USP17L10C9JJH3 530 aa11.79□□□□□ -0.52
HDAC6-207ENST00000430858 GNRH1P01148 92 aa11.79□□□□□ -0.52
HDAC6-207ENST00000430858 CYP2C8P10632 490 aa11.79□□□□□ -0.52
HDAC6-207ENST00000430858 GNAT2P19087 354 aa11.79□□□□□ -0.52
HDAC6-207ENST00000430858 SHMT1P34896 483 aa11.79□□□□□ -0.52
HDAC6-207ENST00000430858 HMGCS2P54868 508 aa11.79□□□□□ -0.52
HDAC6-207ENST00000430858 PABPC4Q13310 644 aaKnown RBP eCLIP11.79□□□□□ -0.522e-6■■■■□ 25.6
HDAC6-207ENST00000430858 MTMR2Q13614 643 aa11.79□□□□□ -0.52
HDAC6-207ENST00000430858 ABCB5Q2M3G0 1257 aa11.79□□□□□ -0.52
HDAC6-207ENST00000430858 SHROOM1Q2M3G4 852 aaPredicted RBP11.79□□□□□ -0.52
HDAC6-207ENST00000430858 GIMAP6Q6P9H5 292 aa11.79□□□□□ -0.52
HDAC6-207ENST00000430858 SMCR8Q8TEV9 937 aaPredicted RBP11.79□□□□□ -0.52
HDAC6-207ENST00000430858 FSD1Q9BTV5 496 aa11.79□□□□□ -0.52
HDAC6-207ENST00000430858 LNPKQ9C0E8 428 aa11.79□□□□□ -0.52
HDAC6-207ENST00000430858 TMOD4Q9NZQ9 345 aa11.79□□□□□ -0.52
HDAC6-207ENST00000430858 MYH1P12882 1939 aa11.78□□□□□ -0.52
HDAC6-207ENST00000430858 DDX60LQ5H9U9 1706 aaKnown RBP11.78□□□□□ -0.52
HDAC6-207ENST00000430858 USP17L12C9JPN9 530 aa11.78□□□□□ -0.52
HDAC6-207ENST00000430858 USP17L21D6R901 530 aa11.78□□□□□ -0.52
HDAC6-207ENST00000430858 GPAA1O43292 621 aa11.78□□□□□ -0.52
HDAC6-207ENST00000430858 CYP2D6P10635 497 aa11.78□□□□□ -0.52
HDAC6-207ENST00000430858 OSBPP22059 807 aa11.78□□□□□ -0.52
HDAC6-207ENST00000430858 NUCB1Q02818 461 aa11.78□□□□□ -0.52
HDAC6-207ENST00000430858 TREML2Q5T2D2 321 aa11.78□□□□□ -0.52
HDAC6-207ENST00000430858 C12orf60Q5U649 245 aa11.78□□□□□ -0.52
HDAC6-207ENST00000430858 B4GALNT3Q6L9W6 998 aa11.78□□□□□ -0.52
HDAC6-207ENST00000430858 CHD1LQ86WJ1 897 aa11.78□□□□□ -0.52
HDAC6-207ENST00000430858 EVI5LQ96CN4 794 aa11.78□□□□□ -0.52
HDAC6-207ENST00000430858 ARPP21Q9UBL0 812 aaPredicted RBP11.78□□□□□ -0.52
HDAC6-207ENST00000430858 PTPN22Q9Y2R2 807 aa11.78□□□□□ -0.52
HDAC6-207ENST00000430858 PHIPQ8WWQ0 1821 aa11.78□□□□□ -0.52
HDAC6-207ENST00000430858 GSG1L2A8MUP6 293 aa11.77□□□□□ -0.53
HDAC6-207ENST00000430858 BCRP11274 1271 aa11.77□□□□□ -0.53
HDAC6-207ENST00000430858 HOXA7P31268 230 aaPredicted RBP11.77□□□□□ -0.53
HDAC6-207ENST00000430858 PRMT2P55345 433 aa11.77□□□□□ -0.53
HDAC6-207ENST00000430858 CAP1Q01518 475 aa11.77□□□□□ -0.53
HDAC6-207ENST00000430858 EVX2Q03828 476 aa11.77□□□□□ -0.53
HDAC6-207ENST00000430858 RAB3GAP1Q15042 981 aa11.77□□□□□ -0.53
HDAC6-207ENST00000430858 CTR9Q6PD62 1173 aa11.77□□□□□ -0.53
HDAC6-207ENST00000430858 USP17L2Q6R6M4 530 aa11.77□□□□□ -0.53
HDAC6-207ENST00000430858 TICAM2Q86XR7 235 aa11.77□□□□□ -0.53
HDAC6-207ENST00000430858 CCDC17Q96LX7 622 aa11.77□□□□□ -0.53
HDAC6-207ENST00000430858 NAV1Q8NEY1 1877 aa11.76□□□□□ -0.53
HDAC6-207ENST00000430858 PATL2C9JE40 543 aaKnown RBP11.76□□□□□ -0.53
HDAC6-207ENST00000430858 M0R2C6 588 aa11.76□□□□□ -0.53
HDAC6-207ENST00000430858 MPHOSPH10O00566 681 aaKnown RBP11.76□□□□□ -0.53
HDAC6-207ENST00000430858 HOXD10P28358 340 aa11.76□□□□□ -0.53
HDAC6-207ENST00000430858 PSMC4P43686 418 aa11.76□□□□□ -0.53
HDAC6-207ENST00000430858 GCLCP48506 637 aaPredicted RBP11.76□□□□□ -0.53
HDAC6-207ENST00000430858 USP14P54578 494 aa11.76□□□□□ -0.53
HDAC6-207ENST00000430858 IRX3P78415 501 aaPredicted RBP11.76□□□□□ -0.53
HDAC6-207ENST00000430858 SBK1Q52WX2 424 aa11.76□□□□□ -0.53
HDAC6-207ENST00000430858 ZMYM1Q5SVZ6 1142 aa11.76□□□□□ -0.53
HDAC6-207ENST00000430858 TMEM179Q6ZVK1 233 aa11.76□□□□□ -0.53
HDAC6-207ENST00000430858 C16orf86Q6ZW13 317 aa11.76□□□□□ -0.53
HDAC6-207ENST00000430858 SLC44A5Q8NCS7 719 aa11.76□□□□□ -0.53
HDAC6-207ENST00000430858 DYNLL2Q96FJ2 89 aa11.76□□□□□ -0.53
HDAC6-207ENST00000430858 C12orf42Q96LP6 360 aa11.76□□□□□ -0.53
HDAC6-207ENST00000430858 FEZ1Q99689 392 aa11.76□□□□□ -0.53
HDAC6-207ENST00000430858 ARHGAP39Q9C0H5 1083 aa11.76□□□□□ -0.53
HDAC6-207ENST00000430858 KIAA1683Q9H0B3 1180 aa11.76□□□□□ -0.53
HDAC6-207ENST00000430858 ASCC2Q9H1I8 757 aaPredicted RBP11.76□□□□□ -0.53
HDAC6-207ENST00000430858 OSBPL3Q9H4L5 887 aa11.76□□□□□ -0.53
HDAC6-207ENST00000430858 EMILIN3Q9NT22 766 aa11.76□□□□□ -0.53
HDAC6-207ENST00000430858 MYH7P12883 1935 aa11.76□□□□□ -0.53
HDAC6-207ENST00000430858 ATAD5Q96QE3 1844 aa11.75□□□□□ -0.53
HDAC6-207ENST00000430858 CYP2D7A0A087X1C5 515 aa11.75□□□□□ -0.53
HDAC6-207ENST00000430858 FMNL1O95466 1100 aaPredicted RBP11.75□□□□□ -0.53
HDAC6-207ENST00000430858 APPP05067 770 aa11.75□□□□□ -0.53
HDAC6-207ENST00000430858 GUCY1A2P33402 732 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms