RNA–Protein interactions for RNA: ENST00000430771.2

CHD4-202, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-202ENST00000430771 DLK2Q6UY11 383 aa13.01□□□□□ -0.33
CHD4-202ENST00000430771 ANKRD13AQ8IZ07 590 aa13.01□□□□□ -0.33
CHD4-202ENST00000430771 ZNF444Q8N0Y2 327 aaPredicted RBP13.01□□□□□ -0.33
CHD4-202ENST00000430771 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.01□□□□□ -0.33
CHD4-202ENST00000430771 KCNB2Q92953 911 aa13.01□□□□□ -0.33
CHD4-202ENST00000430771 KLRG1Q96E93 195 aa13.01□□□□□ -0.33
CHD4-202ENST00000430771 C22orf23Q9BZE7 217 aa13.01□□□□□ -0.33
CHD4-202ENST00000430771 CABP5Q9NP86 173 aa13.01□□□□□ -0.33
CHD4-202ENST00000430771 ZNF112Q9UJU3 913 aa13.01□□□□□ -0.33
CHD4-202ENST00000430771 SMIM22K7EJ46 135 aa13□□□□□ -0.33
CHD4-202ENST00000430771 MPHOSPH10O00566 681 aaKnown RBP13□□□□□ -0.33
CHD4-202ENST00000430771 RANBP6O60518 1105 aaKnown RBP13□□□□□ -0.33
CHD4-202ENST00000430771 CTNND1O60716 968 aaKnown RBP13□□□□□ -0.33
CHD4-202ENST00000430771 USP2O75604 605 aaPredicted RBP13□□□□□ -0.33
CHD4-202ENST00000430771 GDF11O95390 407 aa13□□□□□ -0.33
CHD4-202ENST00000430771 ASNSP08243 561 aa13□□□□□ -0.33
CHD4-202ENST00000430771 RASA1P20936 1047 aa13□□□□□ -0.33
CHD4-202ENST00000430771 PSMA5P28066 241 aa13□□□□□ -0.33
CHD4-202ENST00000430771 MAP3K9P80192 1104 aa13□□□□□ -0.33
CHD4-202ENST00000430771 ABCB5Q2M3G0 1257 aa13□□□□□ -0.33
CHD4-202ENST00000430771 TMEM179Q6ZVK1 233 aa13□□□□□ -0.33
CHD4-202ENST00000430771 SCYL3Q8IZE3 742 aa13□□□□□ -0.33
CHD4-202ENST00000430771 PICK1Q9NRD5 415 aa13□□□□□ -0.33
CHD4-202ENST00000430771 ZBTB21Q9ULJ3 1066 aa13□□□□□ -0.33
CHD4-202ENST00000430771 SNX14Q9Y5W7 946 aa13□□□□□ -0.33
CHD4-202ENST00000430771 PHF20L1A8MW92 1017 aa12.99□□□□□ -0.33
CHD4-202ENST00000430771 B4E1Z4 1266 aa12.99□□□□□ -0.33
CHD4-202ENST00000430771 HMGB1P09429 215 aaKnown RBP12.99□□□□□ -0.33
CHD4-202ENST00000430771 CAP2P40123 477 aa12.99□□□□□ -0.33
CHD4-202ENST00000430771 FMR1Q06787 632 aaKnown RBP eCLIP12.99□□□□□ -0.331e-13■■■□□ 14.7
CHD4-202ENST00000430771 STOX1Q6ZVD7 989 aa12.99□□□□□ -0.33
CHD4-202ENST00000430771 IQCA1Q86XH1 822 aa12.99□□□□□ -0.33
CHD4-202ENST00000430771 NEK1Q96PY6 1258 aa12.99□□□□□ -0.33
CHD4-202ENST00000430771 TBC1D2Q9BYX2 928 aa12.99□□□□□ -0.33
CHD4-202ENST00000430771 MYH4Q9Y623 1939 aa12.98□□□□□ -0.33
CHD4-202ENST00000430771 TMEM88BA6NKF7 163 aa12.98□□□□□ -0.33
CHD4-202ENST00000430771 KDM4AO75164 1064 aa12.98□□□□□ -0.33
CHD4-202ENST00000430771 SLURP2P0DP57 97 aa12.98□□□□□ -0.33
CHD4-202ENST00000430771 AKR1B1P15121 316 aa12.98□□□□□ -0.33
CHD4-202ENST00000430771 INPP5BP32019 993 aa12.98□□□□□ -0.33
CHD4-202ENST00000430771 RBM25P49756 843 aaKnown RBP12.98□□□□□ -0.33
CHD4-202ENST00000430771 VGLL4Q14135 290 aa12.98□□□□□ -0.33
CHD4-202ENST00000430771 SART3Q15020 963 aaKnown RBP12.98□□□□□ -0.33
CHD4-202ENST00000430771 CCDC178Q5BJE1 867 aa12.98□□□□□ -0.33
CHD4-202ENST00000430771 MB21D2Q8IYB1 491 aaPredicted RBP12.98□□□□□ -0.33
CHD4-202ENST00000430771 RASEFQ8IZ41 740 aa12.98□□□□□ -0.33
CHD4-202ENST00000430771 NEDD1Q8NHV4 660 aa12.98□□□□□ -0.33
CHD4-202ENST00000430771 JAKMIP1Q96N16 626 aaKnown RBP12.98□□□□□ -0.33
CHD4-202ENST00000430771 UBAC1Q9BSL1 405 aa12.98□□□□□ -0.33
CHD4-202ENST00000430771 AS3MTQ9HBK9 375 aa12.98□□□□□ -0.33
CHD4-202ENST00000430771 FZD1Q9UP38 647 aa12.98□□□□□ -0.33
CHD4-202ENST00000430771 PHIPQ8WWQ0 1821 aa12.97□□□□□ -0.33
CHD4-202ENST00000430771 WDR19Q8NEZ3 1342 aa12.97□□□□□ -0.33
CHD4-202ENST00000430771 ERICH2A1L162 156 aa12.97□□□□□ -0.33
CHD4-202ENST00000430771 GH2P01242 217 aa12.97□□□□□ -0.33
CHD4-202ENST00000430771 MCM5P33992 734 aa12.97□□□□□ -0.33
CHD4-202ENST00000430771 APLP1P51693 650 aa12.97□□□□□ -0.33
CHD4-202ENST00000430771 HUNKP57058 714 aa12.97□□□□□ -0.33
CHD4-202ENST00000430771 TFAP4Q01664 338 aa12.97□□□□□ -0.33
CHD4-202ENST00000430771 ICA1Q05084 483 aa12.97□□□□□ -0.33
CHD4-202ENST00000430771 RAB3GAP1Q15042 981 aa12.97□□□□□ -0.33
CHD4-202ENST00000430771 CST9Q5W186 159 aa12.97□□□□□ -0.33
CHD4-202ENST00000430771 BLOC1S2Q6QNY1 142 aa12.97□□□□□ -0.33
CHD4-202ENST00000430771 IL17RAQ96F46 866 aa12.97□□□□□ -0.33
CHD4-202ENST00000430771 TBC1D32Q96NH3 1257 aa12.97□□□□□ -0.33
CHD4-202ENST00000430771 MTA3Q9BTC8 594 aa12.97□□□□□ -0.33
CHD4-202ENST00000430771 TM6SF1Q9BZW5 370 aa12.97□□□□□ -0.33
CHD4-202ENST00000430771 ABT1Q9ULW3 272 aaKnown RBP12.97□□□□□ -0.33
CHD4-202ENST00000430771 TACC3Q9Y6A5 838 aa12.97□□□□□ -0.33
CHD4-202ENST00000430771 SNCAIPQ9Y6H5 919 aa12.97□□□□□ -0.33
CHD4-202ENST00000430771 TAF6LQ9Y6J9 622 aa12.97□□□□□ -0.33
CHD4-202ENST00000430771 TLL2Q9Y6L7 1015 aa12.97□□□□□ -0.33
CHD4-202ENST00000430771 CASTP20810 708 aaKnown RBP12.96□□□□□ -0.33
CHD4-202ENST00000430771 RRP1BQ14684 758 aaKnown RBP12.96□□□□□ -0.33
CHD4-202ENST00000430771 ADCK5Q3MIX3 580 aa12.96□□□□□ -0.33
CHD4-202ENST00000430771 FAM47AQ5JRC9 791 aa12.96□□□□□ -0.33
CHD4-202ENST00000430771 LDLRAD1Q5T700 205 aa12.96□□□□□ -0.33
CHD4-202ENST00000430771 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.96□□□□□ -0.33
CHD4-202ENST00000430771 MOB2Q70IA6 237 aa12.96□□□□□ -0.33
CHD4-202ENST00000430771 ZKSCAN4Q969J2 545 aaPredicted RBP12.96□□□□□ -0.33
CHD4-202ENST00000430771 SH2D4AQ9H788 454 aa12.96□□□□□ -0.33
CHD4-202ENST00000430771 KANSL2Q9H9L4 492 aa12.96□□□□□ -0.33
CHD4-202ENST00000430771 ARHGEF10LQ9HCE6 1279 aa12.96□□□□□ -0.33
CHD4-202ENST00000430771 CREBZFQ9NS37 354 aa12.96□□□□□ -0.33
CHD4-202ENST00000430771 TCP11L1Q9NUJ3 509 aa12.96□□□□□ -0.33
CHD4-202ENST00000430771 PTPRFP10586 1907 aa12.96□□□□□ -0.34
CHD4-202ENST00000430771 TNKSO95271 1327 aa12.95□□□□□ -0.34
CHD4-202ENST00000430771 LOC285556D6RIA3 1793 aa12.95□□□□□ -0.34
CHD4-202ENST00000430771 SPDYE5A6NIY4 337 aa12.95□□□□□ -0.34
CHD4-202ENST00000430771 USP17L5A8MUK1 530 aa12.95□□□□□ -0.34
CHD4-202ENST00000430771 UBE2Q2LH0YL09 131 aa12.95□□□□□ -0.34
CHD4-202ENST00000430771 PRC1O43663 620 aa12.95□□□□□ -0.34
CHD4-202ENST00000430771 TTLL1O95922 423 aa12.95□□□□□ -0.34
CHD4-202ENST00000430771 SEPT2Q15019 361 aa12.95□□□□□ -0.34
CHD4-202ENST00000430771 DHX32Q7L7V1 743 aaKnown RBP12.95□□□□□ -0.34
CHD4-202ENST00000430771 SAPCD2Q86UD0 394 aa12.95□□□□□ -0.34
CHD4-202ENST00000430771 ERO1BQ86YB8 467 aa12.95□□□□□ -0.34
CHD4-202ENST00000430771 HHIPL1Q96JK4 782 aa12.95□□□□□ -0.34
CHD4-202ENST00000430771 TMEM87BQ96K49 555 aa12.95□□□□□ -0.34
CHD4-202ENST00000430771 FEZ1Q99689 392 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms