RNA–Protein interactions for RNA: ENST00000429968.5

RBM39-212, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-212ENST00000429968 NOSTRINQ8IVI9 506 aa16.13■□□□□ 0.17
RBM39-212ENST00000429968 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.12■□□□□ 0.17
RBM39-212ENST00000429968 TRIM29Q14134 588 aa16.12■□□□□ 0.17
RBM39-212ENST00000429968 NOM1Q5C9Z4 860 aaKnown RBP16.12■□□□□ 0.17
RBM39-212ENST00000429968 PRR5LQ6MZQ0 368 aa16.12■□□□□ 0.17
RBM39-212ENST00000429968 SEPT12Q8IYM1 358 aa16.12■□□□□ 0.17
RBM39-212ENST00000429968 NAV1Q8NEY1 1877 aa16.12■□□□□ 0.17
RBM39-212ENST00000429968 PDS5AQ29RF7 1337 aaKnown RBP16.12■□□□□ 0.17
RBM39-212ENST00000429968 WNT7AO00755 349 aa16.12■□□□□ 0.17
RBM39-212ENST00000429968 NPHP1O15259 732 aa16.12■□□□□ 0.17
RBM39-212ENST00000429968 PPP6R2O75170 966 aa16.12■□□□□ 0.17
RBM39-212ENST00000429968 TROAPQ12815 778 aa16.12■□□□□ 0.17
RBM39-212ENST00000429968 ARID5BQ14865 1188 aa16.12■□□□□ 0.17
RBM39-212ENST00000429968 KIAA1524Q8TCG1 905 aa16.12■□□□□ 0.17
RBM39-212ENST00000429968 MTA3Q9BTC8 594 aa16.12■□□□□ 0.17
RBM39-212ENST00000429968 ANO10Q9NW15 660 aa16.12■□□□□ 0.17
RBM39-212ENST00000429968 VPS54Q9P1Q0 977 aa16.12■□□□□ 0.17
RBM39-212ENST00000429968 ADAMTS3O15072 1205 aa16.11■□□□□ 0.17
RBM39-212ENST00000429968 DEXIO95424 95 aa16.11■□□□□ 0.17
RBM39-212ENST00000429968 USP17L8P0C7I0 530 aa16.11■□□□□ 0.17
RBM39-212ENST00000429968 DIXDC1Q155Q3 683 aa16.11■□□□□ 0.17
RBM39-212ENST00000429968 RESP18Q5W5W9 173 aa16.11■□□□□ 0.17
RBM39-212ENST00000429968 ANKIB1Q9P2G1 1089 aa16.11■□□□□ 0.17
RBM39-212ENST00000429968 PCDHB6Q9Y5E3 794 aa16.11■□□□□ 0.17
RBM39-212ENST00000429968 FOXN1O15353 648 aa16.1■□□□□ 0.17
RBM39-212ENST00000429968 VEGFAP15692 232 aaPredicted RBP16.1■□□□□ 0.17
RBM39-212ENST00000429968 GRAPQ13588 217 aa16.1■□□□□ 0.17
RBM39-212ENST00000429968 IFIT1BQ5T764 474 aaKnown RBP16.1■□□□□ 0.17
RBM39-212ENST00000429968 TRIM22Q8IYM9 498 aa16.1■□□□□ 0.17
RBM39-212ENST00000429968 CNBD1Q8NA66 436 aa16.1■□□□□ 0.17
RBM39-212ENST00000429968 GRAPLQ8TC17 118 aaPredicted RBP16.1■□□□□ 0.17
RBM39-212ENST00000429968 ZMYND15Q9H091 742 aa16.1■□□□□ 0.17
RBM39-212ENST00000429968 ZBTB22O15209 634 aa16.1■□□□□ 0.17
RBM39-212ENST00000429968 SLC3A2P08195 630 aaKnown RBP16.1■□□□□ 0.17
RBM39-212ENST00000429968 SYKP43405 635 aa16.1■□□□□ 0.17
RBM39-212ENST00000429968 PNOCQ13519 176 aa16.1■□□□□ 0.17
RBM39-212ENST00000429968 MEX3CQ5U5Q3 659 aaKnown RBP16.1■□□□□ 0.17
RBM39-212ENST00000429968 SARM1Q6SZW1 724 aa16.1■□□□□ 0.17
RBM39-212ENST00000429968 TMTC2Q8N394 836 aa16.1■□□□□ 0.17
RBM39-212ENST00000429968 SPTLC3Q9NUV7 552 aa16.1■□□□□ 0.17
RBM39-212ENST00000429968 GOLGA6L19H0YKK7 550 aa16.09■□□□□ 0.17
RBM39-212ENST00000429968 GYS1P13807 737 aa16.09■□□□□ 0.17
RBM39-212ENST00000429968 HSPA1LP34931 641 aa16.09■□□□□ 0.17
RBM39-212ENST00000429968 LONRF3Q496Y0 759 aa16.09■□□□□ 0.17
RBM39-212ENST00000429968 METTL16Q86W50 562 aaKnown RBP16.09■□□□□ 0.17
RBM39-212ENST00000429968 DRC7Q8IY82 874 aa16.09■□□□□ 0.17
RBM39-212ENST00000429968 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.09■□□□□ 0.17
RBM39-212ENST00000429968 CLIP2Q9UDT6 1046 aa16.09■□□□□ 0.17
RBM39-212ENST00000429968 FAM237AA0A1B0GTK4 181 aa16.09■□□□□ 0.17
RBM39-212ENST00000429968 ONECUT3O60422 494 aaPredicted RBP16.09■□□□□ 0.17
RBM39-212ENST00000429968 CAVIN2O95810 425 aa16.09■□□□□ 0.17
RBM39-212ENST00000429968 ATP2B1P20020 1258 aa16.09■□□□□ 0.17
RBM39-212ENST00000429968 RCAN1P53805 252 aa16.09■□□□□ 0.17
RBM39-212ENST00000429968 GPSM2P81274 684 aa16.09■□□□□ 0.17
RBM39-212ENST00000429968 NPY5RQ15761 445 aa16.09■□□□□ 0.17
RBM39-212ENST00000429968 FOXP4Q8IVH2 680 aaPredicted RBP16.09■□□□□ 0.17
RBM39-212ENST00000429968 SH3RF3Q8TEJ3 882 aaPredicted RBP16.09■□□□□ 0.17
RBM39-212ENST00000429968 CACTINQ8WUQ7 758 aaKnown RBP16.09■□□□□ 0.17
RBM39-212ENST00000429968 DYNLL2Q96FJ2 89 aa16.09■□□□□ 0.17
RBM39-212ENST00000429968 CRNKL1Q9BZJ0 848 aaKnown RBP16.09■□□□□ 0.17
RBM39-212ENST00000429968 MKRN1Q9UHC7 482 aaKnown RBP16.09■□□□□ 0.17
RBM39-212ENST00000429968 FBXO2Q9UK22 296 aaPredicted RBP16.09■□□□□ 0.17
RBM39-212ENST00000429968 RCSD1Q6JBY9 416 aa16.08■□□□□ 0.16
RBM39-212ENST00000429968 USP49Q70CQ1 688 aa16.08■□□□□ 0.16
RBM39-212ENST00000429968 DZIP1Q86YF9 867 aaKnown RBP16.08■□□□□ 0.16
RBM39-212ENST00000429968 CEP57L1Q8IYX8 460 aa16.08■□□□□ 0.16
RBM39-212ENST00000429968 WASF1Q92558 559 aa16.08■□□□□ 0.16
RBM39-212ENST00000429968 RNF26Q9BY78 433 aaPredicted RBP16.08■□□□□ 0.16
RBM39-212ENST00000429968 FOXP1Q9H334 677 aaPredicted RBP16.08■□□□□ 0.16
RBM39-212ENST00000429968 V9GY48 417 aaPredicted RBP16.08■□□□□ 0.16
RBM39-212ENST00000429968 CCDC196A0A1B0GTZ2 297 aa16.07■□□□□ 0.16
RBM39-212ENST00000429968 BECN2A8MW95 431 aa16.07■□□□□ 0.16
RBM39-212ENST00000429968 ORC4O43929 436 aa16.07■□□□□ 0.16
RBM39-212ENST00000429968 NCAPHQ15003 741 aa16.07■□□□□ 0.16
RBM39-212ENST00000429968 SRBD1Q8N5C6 995 aaKnown RBP16.07■□□□□ 0.16
RBM39-212ENST00000429968 HSD3B7Q9H2F3 369 aa16.07■□□□□ 0.16
RBM39-212ENST00000429968 CABP5Q9NP86 173 aa16.07■□□□□ 0.16
RBM39-212ENST00000429968 CNTNAP5Q8WYK1 1306 aa16.07■□□□□ 0.16
RBM39-212ENST00000429968 ANKRD31Q8N7Z5 1873 aa16.07■□□□□ 0.16
RBM39-212ENST00000429968 NLRP12P59046 1061 aa16.07■□□□□ 0.16
RBM39-212ENST00000429968 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.07■□□□□ 0.16
RBM39-212ENST00000429968 ATP8A2Q9NTI2 1148 aa16.07■□□□□ 0.16
RBM39-212ENST00000429968 MCM9Q9NXL9 1143 aa16.07■□□□□ 0.16
RBM39-212ENST00000429968 LTBP1Q14766 1721 aa16.07■□□□□ 0.16
RBM39-212ENST00000429968 DDX60LQ5H9U9 1706 aaKnown RBP16.07■□□□□ 0.16
RBM39-212ENST00000429968 CUTAO60888 179 aa16.06■□□□□ 0.16
RBM39-212ENST00000429968 DDR1Q08345 913 aa16.06■□□□□ 0.16
RBM39-212ENST00000429968 TMTC3Q6ZXV5 915 aa16.06■□□□□ 0.16
RBM39-212ENST00000429968 CATIPQ7Z7H3 387 aa16.06■□□□□ 0.16
RBM39-212ENST00000429968 IQCA1Q86XH1 822 aa16.06■□□□□ 0.16
RBM39-212ENST00000429968 SLC44A5Q8NCS7 719 aa16.06■□□□□ 0.16
RBM39-212ENST00000429968 PHF20Q9BVI0 1012 aa16.06■□□□□ 0.16
RBM39-212ENST00000429968 IL17RBQ9NRM6 502 aa16.06■□□□□ 0.16
RBM39-212ENST00000429968 TUBE1Q9UJT0 475 aa16.06■□□□□ 0.16
RBM39-212ENST00000429968 KCNH3Q9ULD8 1083 aa16.06■□□□□ 0.16
RBM39-212ENST00000429968 XDHP47989 1333 aa16.06■□□□□ 0.16
RBM39-212ENST00000429968 GOLGA6L6A8MZA4 724 aa16.06■□□□□ 0.16
RBM39-212ENST00000429968 CLSTN1O94985 981 aa16.06■□□□□ 0.16
RBM39-212ENST00000429968 BMP6P22004 513 aa16.06■□□□□ 0.16
RBM39-212ENST00000429968 CDC25BP30305 580 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms