RNA–Protein interactions for RNA: ENST00000429774.6

ATXN3-204, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 6,713 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-204ENST00000429774 MAP3K9P80192 1104 aa8.05□□□□□ -1.12
ATXN3-204ENST00000429774 SPECC1Q5M775 1068 aa8.05□□□□□ -1.12
ATXN3-204ENST00000429774 KRT79Q5XKE5 535 aa8.05□□□□□ -1.12
ATXN3-204ENST00000429774 TRMT2AQ8IZ69 625 aaKnown RBP8.05□□□□□ -1.12
ATXN3-204ENST00000429774 PNPLA6Q8IY17 1366 aa8.05□□□□□ -1.12
ATXN3-204ENST00000429774 TXKP42681 527 aa8.05□□□□□ -1.12
ATXN3-204ENST00000429774 ICA1Q05084 483 aa8.05□□□□□ -1.12
ATXN3-204ENST00000429774 CCDC181Q5TID7 509 aa8.05□□□□□ -1.12
ATXN3-204ENST00000429774 OTUD7BQ6GQQ9 843 aa8.05□□□□□ -1.12
ATXN3-204ENST00000429774 IPO4Q8TEX9 1081 aaKnown RBP8.05□□□□□ -1.12
ATXN3-204ENST00000429774 GINS2Q9Y248 185 aa8.05□□□□□ -1.12
ATXN3-204ENST00000429774 AK9Q5TCS8 1911 aa8.05□□□□□ -1.12
ATXN3-204ENST00000429774 CTAGE5O15320 804 aa8.05□□□□□ -1.12
ATXN3-204ENST00000429774 CCT6AP40227 531 aaKnown RBP8.05□□□□□ -1.12
ATXN3-204ENST00000429774 EPHA10Q5JZY3 1008 aa8.05□□□□□ -1.12
ATXN3-204ENST00000429774 GIMAP6Q6P9H5 292 aa8.05□□□□□ -1.12
ATXN3-204ENST00000429774 KCNG4Q8TDN1 519 aa8.05□□□□□ -1.12
ATXN3-204ENST00000429774 TRIM47Q96LD4 638 aa8.05□□□□□ -1.12
ATXN3-204ENST00000429774 PYM1Q9BRP8 204 aaKnown RBP8.05□□□□□ -1.12
ATXN3-204ENST00000429774 COPRSQ9NQ92 184 aa8.05□□□□□ -1.12
ATXN3-204ENST00000429774 H7C1W4 665 aa8.04□□□□□ -1.12
ATXN3-204ENST00000429774 EPB41L2O43491 1005 aaKnown RBP8.04□□□□□ -1.12
ATXN3-204ENST00000429774 USP17L8P0C7I0 530 aa8.04□□□□□ -1.12
ATXN3-204ENST00000429774 HARSP12081 509 aaKnown RBP8.04□□□□□ -1.12
ATXN3-204ENST00000429774 SH3RF3Q8TEJ3 882 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-204ENST00000429774 COA1Q9GZY4 146 aa8.04□□□□□ -1.12
ATXN3-204ENST00000429774 VPS54Q9P1Q0 977 aa8.04□□□□□ -1.12
ATXN3-204ENST00000429774 KIF1AQ12756 1690 aa8.04□□□□□ -1.12
ATXN3-204ENST00000429774 CPDO75976 1380 aa8.04□□□□□ -1.12
ATXN3-204ENST00000429774 FGAP02671 866 aa8.04□□□□□ -1.12
ATXN3-204ENST00000429774 IGKV5-2P06315 115 aa8.04□□□□□ -1.12
ATXN3-204ENST00000429774 LCORLQ8N3X6 602 aa8.04□□□□□ -1.12
ATXN3-204ENST00000429774 OSBPP22059 807 aa8.04□□□□□ -1.12
ATXN3-204ENST00000429774 SNAP25P60880 206 aa8.04□□□□□ -1.12
ATXN3-204ENST00000429774 STX1AQ16623 288 aa8.04□□□□□ -1.12
ATXN3-204ENST00000429774 TESPA1A2RU30 521 aaPredicted RBP8.04□□□□□ -1.12
ATXN3-204ENST00000429774 SASH1O94885 1247 aa8.04□□□□□ -1.12
ATXN3-204ENST00000429774 CRKP46108 304 aa8.04□□□□□ -1.12
ATXN3-204ENST00000429774 SUPT20HL1Q3ZLR7 823 aa8.04□□□□□ -1.12
ATXN3-204ENST00000429774 SLFNL1Q499Z3 407 aa8.04□□□□□ -1.12
ATXN3-204ENST00000429774 DYNLL2Q96FJ2 89 aa8.04□□□□□ -1.12
ATXN3-204ENST00000429774 CENPHQ9H3R5 247 aa8.04□□□□□ -1.12
ATXN3-204ENST00000429774 CYP2D7A0A087X1C5 515 aa8.04□□□□□ -1.12
ATXN3-204ENST00000429774 NBPF26B4DH59 902 aa8.04□□□□□ -1.12
ATXN3-204ENST00000429774 SPTLC2O15270 562 aa8.04□□□□□ -1.12
ATXN3-204ENST00000429774 UBE2HP62256 183 aa8.04□□□□□ -1.12
ATXN3-204ENST00000429774 NBPF10Q6P3W6 841 aaKnown RBP8.04□□□□□ -1.12
ATXN3-204ENST00000429774 NBPF15Q8N660 670 aa8.04□□□□□ -1.12
ATXN3-204ENST00000429774 SLIT1O75093 1534 aa8.04□□□□□ -1.12
ATXN3-204ENST00000429774 KDM2BQ8NHM5 1336 aa8.04□□□□□ -1.12
ATXN3-204ENST00000429774 VWDEQ8N2E2 1590 aa8.04□□□□□ -1.12
ATXN3-204ENST00000429774 CCP110O43303 1012 aa8.03□□□□□ -1.12
ATXN3-204ENST00000429774 PIH1D3Q9NQM4 214 aaKnown RBP8.03□□□□□ -1.12
ATXN3-204ENST00000429774 RMND1Q9NWS8 449 aa8.03□□□□□ -1.12
ATXN3-204ENST00000429774 SEMA3EO15041 775 aa8.03□□□□□ -1.12
ATXN3-204ENST00000429774 PUS7LQ9H0K6 701 aaKnown RBP8.03□□□□□ -1.12
ATXN3-204ENST00000429774 RGPD8O14715 1765 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-204ENST00000429774 CCDC169A6NNP5 214 aa8.03□□□□□ -1.12
ATXN3-204ENST00000429774 TMEM232C9JQI7 657 aa8.03□□□□□ -1.12
ATXN3-204ENST00000429774 BMP15O95972 392 aa8.03□□□□□ -1.12
ATXN3-204ENST00000429774 GTF2F1P35269 517 aaKnown RBP eCLIP8.03□□□□□ -1.12
ATXN3-204ENST00000429774 ADD2P35612 726 aa8.03□□□□□ -1.12
ATXN3-204ENST00000429774 DNA2P51530 1060 aa8.03□□□□□ -1.12
ATXN3-204ENST00000429774 AXDND1Q5T1B0 1012 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-204ENST00000429774 GPKOWQ92917 476 aaPredicted RBP eCLIP8.03□□□□□ -1.12
ATXN3-204ENST00000429774 MED23Q9ULK4 1368 aa8.03□□□□□ -1.12
ATXN3-204ENST00000429774 TDRD12Q587J7 1177 aaKnown RBP8.03□□□□□ -1.12
ATXN3-204ENST00000429774 CHURC1Q8WUH1 139 aa8.03□□□□□ -1.12
ATXN3-204ENST00000429774 CCDC94Q9BW85 323 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-204ENST00000429774 DDX19AQ9NUU7 478 aaKnown RBP8.03□□□□□ -1.12
ATXN3-204ENST00000429774 TOP1P11387 765 aaKnown RBP8.03□□□□□ -1.12
ATXN3-204ENST00000429774 ARID4AP29374 1257 aaPredicted RBP8.03□□□□□ -1.12
ATXN3-204ENST00000429774 CETN1Q12798 172 aa8.03□□□□□ -1.12
ATXN3-204ENST00000429774 RASGRF1Q13972 1273 aa8.03□□□□□ -1.12
ATXN3-204ENST00000429774 ANKRD35Q8N283 1001 aa8.03□□□□□ -1.12
ATXN3-204ENST00000429774 TDRD3Q9H7E2 651 aaKnown RBP8.03□□□□□ -1.12
ATXN3-204ENST00000429774 DCCP43146 1447 aa8.02□□□□□ -1.12
ATXN3-204ENST00000429774 SMCO2A6NFE2 343 aa8.02□□□□□ -1.13
ATXN3-204ENST00000429774 SPA17Q15506 151 aa8.02□□□□□ -1.13
ATXN3-204ENST00000429774 ZNF654Q8IZM8 581 aa8.02□□□□□ -1.13
ATXN3-204ENST00000429774 SLC10A4Q96EP9 437 aa8.02□□□□□ -1.13
ATXN3-204ENST00000429774 CCPG1Q9ULG6 757 aa8.02□□□□□ -1.13
ATXN3-204ENST00000429774 SLC16A2P36021 539 aa8.02□□□□□ -1.13
ATXN3-204ENST00000429774 CALCRLQ16602 461 aa8.02□□□□□ -1.13
ATXN3-204ENST00000429774 FAM47CQ5HY64 1035 aa8.02□□□□□ -1.13
ATXN3-204ENST00000429774 ZNF589Q86UQ0 364 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-204ENST00000429774 TICAM2Q86XR7 235 aa8.02□□□□□ -1.13
ATXN3-204ENST00000429774 FAM114A1Q8IWE2 563 aa8.02□□□□□ -1.13
ATXN3-204ENST00000429774 ADGRB1O14514 1584 aa8.02□□□□□ -1.13
ATXN3-204ENST00000429774 JAK2O60674 1132 aa8.02□□□□□ -1.13
ATXN3-204ENST00000429774 MCAMP43121 646 aa8.02□□□□□ -1.13
ATXN3-204ENST00000429774 IREB2P48200 963 aaKnown RBP8.02□□□□□ -1.13
ATXN3-204ENST00000429774 FOXO4P98177 505 aa8.02□□□□□ -1.13
ATXN3-204ENST00000429774 PABPC4Q13310 644 aaKnown RBP eCLIP8.02□□□□□ -1.13
ATXN3-204ENST00000429774 BRDTQ58F21 947 aaPredicted RBP8.02□□□□□ -1.13
ATXN3-204ENST00000429774 SLFN13Q68D06 897 aa8.02□□□□□ -1.13
ATXN3-204ENST00000429774 CC2D2BQ6DHV5 1058 aa8.02□□□□□ -1.13
ATXN3-204ENST00000429774 USP32Q8NFA0 1604 aa8.02□□□□□ -1.13
ATXN3-204ENST00000429774 TXLNBQ8N3L3 684 aa8.02□□□□□ -1.13
ATXN3-204ENST00000429774 PNMA1Q8ND90 353 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms