RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 DYNLL2Q96FJ2 89 aa17.78■□□□□ 0.44
GARNL3-204ENST00000429629 ELP3Q9H9T3 547 aa17.78■□□□□ 0.44
GARNL3-204ENST00000429629 MKNK2Q9HBH9 465 aa17.78■□□□□ 0.44
GARNL3-204ENST00000429629 KCNH4Q9UQ05 1017 aa17.78■□□□□ 0.44
GARNL3-204ENST00000429629 TESPA1A2RU30 521 aaPredicted RBP17.77■□□□□ 0.44
GARNL3-204ENST00000429629 MANSC4A6NHS7 340 aaPredicted RBP17.77■□□□□ 0.44
GARNL3-204ENST00000429629 USP17L5A8MUK1 530 aa17.77■□□□□ 0.44
GARNL3-204ENST00000429629 ORC4O43929 436 aa17.77■□□□□ 0.44
GARNL3-204ENST00000429629 IMMTQ16891 758 aaKnown RBP17.77■□□□□ 0.44
GARNL3-204ENST00000429629 ABCB5Q2M3G0 1257 aa17.77■□□□□ 0.44
GARNL3-204ENST00000429629 TMEM179Q6ZVK1 233 aa17.77■□□□□ 0.44
GARNL3-204ENST00000429629 OPTNQ96CV9 577 aa17.77■□□□□ 0.44
GARNL3-204ENST00000429629 RNF41Q9H4P4 317 aaPredicted RBP17.77■□□□□ 0.44
GARNL3-204ENST00000429629 AFG3L2Q9Y4W6 797 aa17.77■□□□□ 0.44
GARNL3-204ENST00000429629 TM4SF4P48230 202 aa17.76■□□□□ 0.43
GARNL3-204ENST00000429629 GTF2A2P52657 109 aa17.76■□□□□ 0.43
GARNL3-204ENST00000429629 EVX2Q03828 476 aa17.76■□□□□ 0.43
GARNL3-204ENST00000429629 SLC4A8Q2Y0W8 1093 aa17.76■□□□□ 0.43
GARNL3-204ENST00000429629 ZNF444Q8N0Y2 327 aaPredicted RBP17.76■□□□□ 0.43
GARNL3-204ENST00000429629 JMYQ8N9B5 988 aa17.76■□□□□ 0.43
GARNL3-204ENST00000429629 LSG1Q9H089 658 aaKnown RBP17.76■□□□□ 0.43
GARNL3-204ENST00000429629 AS3MTQ9HBK9 375 aa17.76■□□□□ 0.43
GARNL3-204ENST00000429629 ZBTB21Q9ULJ3 1066 aa17.76■□□□□ 0.43
GARNL3-204ENST00000429629 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.76■□□□□ 0.43
GARNL3-204ENST00000429629 ZHX2Q9Y6X8 837 aa17.76■□□□□ 0.43
GARNL3-204ENST00000429629 FOCADQ5VW36 1801 aa17.76■□□□□ 0.43
GARNL3-204ENST00000429629 RASA1P20936 1047 aa17.75■□□□□ 0.43
GARNL3-204ENST00000429629 PTH1RQ03431 593 aa17.75■□□□□ 0.43
GARNL3-204ENST00000429629 PPP4R3BQ5MIZ7 849 aa17.75■□□□□ 0.43
GARNL3-204ENST00000429629 AKNAD1Q5T1N1 836 aa17.75■□□□□ 0.43
GARNL3-204ENST00000429629 PAXIP1Q6ZW49 1069 aaPredicted RBP17.75■□□□□ 0.43
GARNL3-204ENST00000429629 SLC44A5Q8NCS7 719 aa17.75■□□□□ 0.43
GARNL3-204ENST00000429629 STAG1Q8WVM7 1258 aa17.75■□□□□ 0.43
GARNL3-204ENST00000429629 MS4A4AQ96JQ5 239 aa17.75■□□□□ 0.43
GARNL3-204ENST00000429629 DDX60LQ5H9U9 1706 aaKnown RBP17.75■□□□□ 0.43
GARNL3-204ENST00000429629 SMIM22K7EJ46 135 aa17.74■□□□□ 0.43
GARNL3-204ENST00000429629 IRF6O14896 467 aa17.74■□□□□ 0.43
GARNL3-204ENST00000429629 REC8O95072 547 aa17.74■□□□□ 0.43
GARNL3-204ENST00000429629 GH2P01242 217 aa17.74■□□□□ 0.43
GARNL3-204ENST00000429629 GJA5P36382 358 aa17.74■□□□□ 0.43
GARNL3-204ENST00000429629 JAG1P78504 1218 aa17.74■□□□□ 0.43
GARNL3-204ENST00000429629 SREBF2Q12772 1141 aa17.74■□□□□ 0.43
GARNL3-204ENST00000429629 SNAPC2Q13487 334 aa17.74■□□□□ 0.43
GARNL3-204ENST00000429629 ZNF280CQ8ND82 737 aa17.74■□□□□ 0.43
GARNL3-204ENST00000429629 KANSL2Q9H9L4 492 aa17.74■□□□□ 0.43
GARNL3-204ENST00000429629 SYNPO2Q9UMS6 1093 aa17.74■□□□□ 0.43
GARNL3-204ENST00000429629 C19orf81C9J6K1 198 aa17.73■□□□□ 0.43
GARNL3-204ENST00000429629 CETPP11597 493 aa17.73■□□□□ 0.43
GARNL3-204ENST00000429629 GUCY1A2P33402 732 aa17.73■□□□□ 0.43
GARNL3-204ENST00000429629 KIF23Q02241 960 aaPredicted RBP17.73■□□□□ 0.43
GARNL3-204ENST00000429629 MAP2K1Q02750 393 aaPredicted RBP17.73■□□□□ 0.43
GARNL3-204ENST00000429629 NECTIN1Q15223 517 aa17.73■□□□□ 0.43
GARNL3-204ENST00000429629 SH3D19Q5HYK7 790 aa17.73■□□□□ 0.43
GARNL3-204ENST00000429629 MFSD6Q6ZSS7 791 aa17.73■□□□□ 0.43
GARNL3-204ENST00000429629 NEDD1Q8NHV4 660 aa17.73■□□□□ 0.43
GARNL3-204ENST00000429629 OTUD5Q96G74 571 aa17.73■□□□□ 0.43
GARNL3-204ENST00000429629 ZCCHC17Q9NP64 241 aaKnown RBP17.73■□□□□ 0.43
GARNL3-204ENST00000429629 GDF11O95390 407 aa17.72■□□□□ 0.43
GARNL3-204ENST00000429629 AKR1B1P15121 316 aa17.72■□□□□ 0.43
GARNL3-204ENST00000429629 FASTKD5Q7L8L6 764 aaKnown RBP17.72■□□□□ 0.43
GARNL3-204ENST00000429629 CNKSR2Q8WXI2 1034 aa17.72■□□□□ 0.43
GARNL3-204ENST00000429629 CNNM2Q9H8M5 875 aa17.72■□□□□ 0.43
GARNL3-204ENST00000429629 ANO2Q9NQ90 1003 aa17.72■□□□□ 0.43
GARNL3-204ENST00000429629 TCP11L1Q9NUJ3 509 aa17.72■□□□□ 0.43
GARNL3-204ENST00000429629 RBM8AQ9Y5S9 174 aaKnown RBP17.72■□□□□ 0.43
GARNL3-204ENST00000429629 CEP350Q5VT06 3117 aa17.71■□□□□ 0.43
GARNL3-204ENST00000429629 PLIN4Q96Q06 1357 aa17.71■□□□□ 0.43
GARNL3-204ENST00000429629 IGKV6D-41A0A0C4DH26 115 aa17.71■□□□□ 0.43
GARNL3-204ENST00000429629 A0A0G2JLL6 359 aaPredicted RBP17.71■□□□□ 0.43
GARNL3-204ENST00000429629 USP17L10C9JJH3 530 aa17.71■□□□□ 0.43
GARNL3-204ENST00000429629 ALDH1A1P00352 501 aa17.71■□□□□ 0.43
GARNL3-204ENST00000429629 CYP21A2P08686 494 aa17.71■□□□□ 0.43
GARNL3-204ENST00000429629 NOVP48745 357 aa17.71■□□□□ 0.43
GARNL3-204ENST00000429629 BACE1P56817 501 aa17.71■□□□□ 0.43
GARNL3-204ENST00000429629 CTDSPL2Q05D32 466 aa17.71■□□□□ 0.43
GARNL3-204ENST00000429629 TSGA10IPQ3SY00 556 aa17.71■□□□□ 0.43
GARNL3-204ENST00000429629 OTUD7BQ6GQQ9 843 aa17.71■□□□□ 0.43
GARNL3-204ENST00000429629 PRRT2Q7Z6L0 340 aaPredicted RBP17.71■□□□□ 0.43
GARNL3-204ENST00000429629 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.71■□□□□ 0.43
GARNL3-204ENST00000429629 KRT23Q9C075 422 aa17.71■□□□□ 0.43
GARNL3-204ENST00000429629 NBPF3Q9H094 633 aa17.71■□□□□ 0.43
GARNL3-204ENST00000429629 KIAA1683Q9H0B3 1180 aa17.71■□□□□ 0.43
GARNL3-204ENST00000429629 NYAP2Q9P242 653 aa17.71■□□□□ 0.43
GARNL3-204ENST00000429629 CDK5RAP2Q96SN8 1893 aa17.71■□□□□ 0.43
GARNL3-204ENST00000429629 CA12O43570 354 aa17.7■□□□□ 0.42
GARNL3-204ENST00000429629 AOC2O75106 756 aa17.7■□□□□ 0.42
GARNL3-204ENST00000429629 USP14P54578 494 aa17.7■□□□□ 0.42
GARNL3-204ENST00000429629 TFAP4Q01664 338 aa17.7■□□□□ 0.42
GARNL3-204ENST00000429629 SPP2Q13103 211 aa17.7■□□□□ 0.42
GARNL3-204ENST00000429629 SEPT2Q15019 361 aa17.7■□□□□ 0.42
GARNL3-204ENST00000429629 RAB3GAP1Q15042 981 aa17.7■□□□□ 0.42
GARNL3-204ENST00000429629 CCDC178Q5BJE1 867 aa17.7■□□□□ 0.42
GARNL3-204ENST00000429629 RNF20Q5VTR2 975 aa17.7■□□□□ 0.42
GARNL3-204ENST00000429629 PROCA1Q8NCQ7 364 aaPredicted RBP17.7■□□□□ 0.42
GARNL3-204ENST00000429629 ESR2Q92731 530 aa17.7■□□□□ 0.42
GARNL3-204ENST00000429629 MKL1Q969V6 931 aa17.7■□□□□ 0.42
GARNL3-204ENST00000429629 SH2D4AQ9H788 454 aa17.7■□□□□ 0.42
GARNL3-204ENST00000429629 SLC45A1Q9Y2W3 748 aa17.7■□□□□ 0.42
GARNL3-204ENST00000429629 MPHOSPH10O00566 681 aaKnown RBP17.69■□□□□ 0.42
GARNL3-204ENST00000429629 TSPY3P0CV98 308 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms