RNA–Protein interactions for RNA: ENST00000428704.1

HDAC1-202, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 664 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-202ENST00000428704 FKBP1AP62942 108 aaKnown RBP10.63□□□□□ -0.71
HDAC1-202ENST00000428704 LBHD1Q9BQE6 289 aaPredicted RBP10.63□□□□□ -0.71
HDAC1-202ENST00000428704 ALPK3Q96L96 1907 aa10.62□□□□□ -0.71
HDAC1-202ENST00000428704 DPYSL4O14531 572 aa10.62□□□□□ -0.71
HDAC1-202ENST00000428704 UBTFL1P0CB47 393 aaPredicted RBP10.62□□□□□ -0.71
HDAC1-202ENST00000428704 IL1R1P14778 569 aa10.62□□□□□ -0.71
HDAC1-202ENST00000428704 ZNF804AQ7Z570 1209 aa10.62□□□□□ -0.71
HDAC1-202ENST00000428704 SKAP1Q86WV1 359 aa10.62□□□□□ -0.71
HDAC1-202ENST00000428704 HOOK2Q96ED9 719 aa10.62□□□□□ -0.71
HDAC1-202ENST00000428704 HMX1Q9NP08 348 aaPredicted RBP10.62□□□□□ -0.71
HDAC1-202ENST00000428704 SERPINA10Q9UK55 444 aa10.62□□□□□ -0.71
HDAC1-202ENST00000428704 LRRFIP2Q9Y608 721 aaKnown RBP10.62□□□□□ -0.71
HDAC1-202ENST00000428704 PFASO15067 1338 aa10.61□□□□□ -0.71
HDAC1-202ENST00000428704 MROH5Q6ZUA9 1318 aa10.61□□□□□ -0.71
HDAC1-202ENST00000428704 RGS3P49796 1198 aa10.61□□□□□ -0.71
HDAC1-202ENST00000428704 UBE4AQ14139 1066 aa10.61□□□□□ -0.71
HDAC1-202ENST00000428704 LCE2DQ5TA82 110 aaPredicted RBP10.61□□□□□ -0.71
HDAC1-202ENST00000428704 ATG9AQ7Z3C6 839 aa10.61□□□□□ -0.71
HDAC1-202ENST00000428704 COA7Q96BR5 231 aa10.61□□□□□ -0.71
HDAC1-202ENST00000428704 TTF2Q9UNY4 1162 aaKnown RBP10.61□□□□□ -0.71
HDAC1-202ENST00000428704 KCNH4Q9UQ05 1017 aa10.61□□□□□ -0.71
HDAC1-202ENST00000428704 SYNGAP1Q96PV0 1343 aa10.6□□□□□ -0.71
HDAC1-202ENST00000428704 EYA2O00167 538 aa10.6□□□□□ -0.71
HDAC1-202ENST00000428704 PDE8BO95263 885 aa10.6□□□□□ -0.71
HDAC1-202ENST00000428704 HMGCRP04035 888 aa10.6□□□□□ -0.71
HDAC1-202ENST00000428704 GYG1P46976 350 aa10.6□□□□□ -0.71
HDAC1-202ENST00000428704 METTL24Q5JXM2 366 aa10.6□□□□□ -0.71
HDAC1-202ENST00000428704 DCAF15Q66K64 600 aa10.6□□□□□ -0.71
HDAC1-202ENST00000428704 TDRD7Q8NHU6 1098 aaKnown RBP10.6□□□□□ -0.71
HDAC1-202ENST00000428704 KHSRPQ92945 711 aaKnown RBP eCLIP10.6□□□□□ -0.71
HDAC1-202ENST00000428704 DDRGK1Q96HY6 314 aa10.6□□□□□ -0.71
HDAC1-202ENST00000428704 FAM84BQ96KN1 310 aaPredicted RBP10.6□□□□□ -0.71
HDAC1-202ENST00000428704 TTYH1Q9H313 450 aaPredicted RBP10.6□□□□□ -0.71
HDAC1-202ENST00000428704 NOP58Q9Y2X3 529 aaKnown RBP10.6□□□□□ -0.71
HDAC1-202ENST00000428704 CDH23Q9H251 3354 aa10.6□□□□□ -0.71
HDAC1-202ENST00000428704 FGFR2P21802 821 aa10.59□□□□□ -0.71
HDAC1-202ENST00000428704 INPP5BP32019 993 aa10.59□□□□□ -0.71
HDAC1-202ENST00000428704 CACNB3P54284 484 aa10.59□□□□□ -0.71
HDAC1-202ENST00000428704 NUCB1Q02818 461 aa10.59□□□□□ -0.71
HDAC1-202ENST00000428704 MTX1Q13505 466 aa10.59□□□□□ -0.71
HDAC1-202ENST00000428704 MOGSQ13724 837 aa10.59□□□□□ -0.71
HDAC1-202ENST00000428704 LRRC26Q2I0M4 334 aa10.59□□□□□ -0.71
HDAC1-202ENST00000428704 USP38Q8NB14 1042 aa10.59□□□□□ -0.71
HDAC1-202ENST00000428704 ZNF341Q9BYN7 854 aa10.59□□□□□ -0.71
HDAC1-202ENST00000428704 OGDHLQ9ULD0 1010 aa10.59□□□□□ -0.71
HDAC1-202ENST00000428704 HCN4Q9Y3Q4 1203 aa10.59□□□□□ -0.71
HDAC1-202ENST00000428704 NUDT7P0C024 238 aa10.58□□□□□ -0.72
HDAC1-202ENST00000428704 CRKP46108 304 aa10.58□□□□□ -0.72
HDAC1-202ENST00000428704 MFSD14BQ5SR56 506 aa10.58□□□□□ -0.72
HDAC1-202ENST00000428704 GPAT2Q6NUI2 795 aa10.58□□□□□ -0.72
HDAC1-202ENST00000428704 FBXO33Q7Z6M2 555 aa10.58□□□□□ -0.72
HDAC1-202ENST00000428704 RPAP2Q8IXW5 612 aaPredicted RBP10.58□□□□□ -0.72
HDAC1-202ENST00000428704 ADAMTS19Q8TE59 1207 aa10.58□□□□□ -0.72
HDAC1-202ENST00000428704 SMCR8Q8TEV9 937 aaPredicted RBP10.58□□□□□ -0.72
HDAC1-202ENST00000428704 SNX27Q96L92 541 aa10.58□□□□□ -0.72
HDAC1-202ENST00000428704 UHRF1Q96T88 793 aaPredicted RBP10.58□□□□□ -0.72
HDAC1-202ENST00000428704 C1QTNF1Q9BXJ1 281 aa10.58□□□□□ -0.72
HDAC1-202ENST00000428704 SIL1Q9H173 461 aa10.58□□□□□ -0.72
HDAC1-202ENST00000428704 TMOD2Q9NZR1 351 aa10.58□□□□□ -0.72
HDAC1-202ENST00000428704 PA2G4Q9UQ80 394 aaKnown RBP10.58□□□□□ -0.72
HDAC1-202ENST00000428704 SPDYE16A6NNV3 312 aaPredicted RBP10.57□□□□□ -0.72
HDAC1-202ENST00000428704 CIAO1O76071 339 aa10.57□□□□□ -0.72
HDAC1-202ENST00000428704 GNAI3P08754 354 aa10.57□□□□□ -0.72
HDAC1-202ENST00000428704 HIBADHP31937 336 aaKnown RBP10.57□□□□□ -0.72
HDAC1-202ENST00000428704 SMAD3P84022 425 aaKnown RBP10.57□□□□□ -0.72
HDAC1-202ENST00000428704 TRIM32Q13049 653 aa10.57□□□□□ -0.72
HDAC1-202ENST00000428704 PUM3Q15397 648 aaKnown RBP10.57□□□□□ -0.72
HDAC1-202ENST00000428704 MIGA2Q7L4E1 593 aa10.57□□□□□ -0.72
HDAC1-202ENST00000428704 IL27Q8NEV9 243 aa10.57□□□□□ -0.72
HDAC1-202ENST00000428704 ATXN2LQ8WWM7 1075 aaKnown RBP10.57□□□□□ -0.72
HDAC1-202ENST00000428704 COPRSQ9NQ92 184 aa10.57□□□□□ -0.72
HDAC1-202ENST00000428704 PRKAG2Q9UGJ0 569 aa10.57□□□□□ -0.72
HDAC1-202ENST00000428704 CXCL11O14625 94 aa10.56□□□□□ -0.72
HDAC1-202ENST00000428704 COL6A1P12109 1028 aa10.56□□□□□ -0.72
HDAC1-202ENST00000428704 SHHQ15465 462 aa10.56□□□□□ -0.72
HDAC1-202ENST00000428704 GRIK5Q16478 980 aa10.56□□□□□ -0.72
HDAC1-202ENST00000428704 GADL1Q6ZQY3 521 aa10.56□□□□□ -0.72
HDAC1-202ENST00000428704 FASTKD5Q7L8L6 764 aaKnown RBP10.56□□□□□ -0.72
HDAC1-202ENST00000428704 SIRT2Q8IXJ6 389 aa10.56□□□□□ -0.72
HDAC1-202ENST00000428704 IQSEC3Q9UPP2 1182 aaPredicted RBP10.56□□□□□ -0.72
HDAC1-202ENST00000428704 DDX60LQ5H9U9 1706 aaKnown RBP10.55□□□□□ -0.72
HDAC1-202ENST00000428704 PNMA6EA0A0J9YXQ4 647 aa10.55□□□□□ -0.72
HDAC1-202ENST00000428704 SRGAP3O43295 1099 aa10.55□□□□□ -0.72
HDAC1-202ENST00000428704 ERICH6Q7L0X2 663 aa10.55□□□□□ -0.72
HDAC1-202ENST00000428704 FAM83AQ86UY5 434 aa10.55□□□□□ -0.72
HDAC1-202ENST00000428704 CHD1LQ86WJ1 897 aa10.55□□□□□ -0.72
HDAC1-202ENST00000428704 ANKRD13CQ8N6S4 541 aa10.55□□□□□ -0.72
HDAC1-202ENST00000428704 ASB2Q96Q27 587 aa10.55□□□□□ -0.72
HDAC1-202ENST00000428704 DCTPP1Q9H773 170 aa10.55□□□□□ -0.72
HDAC1-202ENST00000428704 HDAC5Q9UQL6 1122 aa10.55□□□□□ -0.72
HDAC1-202ENST00000428704 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.55□□□□□ -0.72
HDAC1-202ENST00000428704 GNAI2P04899 355 aa10.54□□□□□ -0.72
HDAC1-202ENST00000428704 IFIT1P09914 478 aaKnown RBP10.54□□□□□ -0.72
HDAC1-202ENST00000428704 IL15P40933 162 aaPredicted RBP10.54□□□□□ -0.72
HDAC1-202ENST00000428704 ATP2B3Q16720 1220 aa10.54□□□□□ -0.72
HDAC1-202ENST00000428704 C9orf50Q5SZB4 431 aa10.54□□□□□ -0.72
HDAC1-202ENST00000428704 PPM1EQ8WY54 764 aa10.54□□□□□ -0.72
HDAC1-202ENST00000428704 LPIN2Q92539 896 aa10.54□□□□□ -0.72
HDAC1-202ENST00000428704 THEGQ9P2T0 379 aa10.54□□□□□ -0.72
HDAC1-202ENST00000428704 SLC45A1Q9Y2W3 748 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms