RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 ERC1Q8IUD2 1116 aa18.93■□□□□ 0.62
SEC13-210ENST00000428626 CRACR2BQ8N4Y2 399 aaPredicted RBP18.93■□□□□ 0.62
SEC13-210ENST00000428626 RIOK1Q9BRS2 568 aaKnown RBP18.93■□□□□ 0.62
SEC13-210ENST00000428626 AS3MTQ9HBK9 375 aa18.93■□□□□ 0.62
SEC13-210ENST00000428626 PLXNB2O15031 1838 aa18.93■□□□□ 0.62
SEC13-210ENST00000428626 DDX60LQ5H9U9 1706 aaKnown RBP18.92■□□□□ 0.62
SEC13-210ENST00000428626 APBB1O00213 710 aa18.92■□□□□ 0.62
SEC13-210ENST00000428626 INHAP05111 366 aa18.92■□□□□ 0.62
SEC13-210ENST00000428626 EVX2Q03828 476 aa18.92■□□□□ 0.62
SEC13-210ENST00000428626 P2RX7Q99572 595 aaKnown RBP18.92■□□□□ 0.62
SEC13-210ENST00000428626 TXNRD2Q9NNW7 524 aa18.92■□□□□ 0.62
SEC13-210ENST00000428626 GJD2Q9UKL4 321 aa18.92■□□□□ 0.62
SEC13-210ENST00000428626 GCLCP48506 637 aaPredicted RBP18.91■□□□□ 0.62
SEC13-210ENST00000428626 UBXN2AP68543 259 aa18.91■□□□□ 0.62
SEC13-210ENST00000428626 TATDN1Q6P1N9 297 aa18.91■□□□□ 0.62
SEC13-210ENST00000428626 PXYLP1Q8TE99 480 aa18.91■□□□□ 0.62
SEC13-210ENST00000428626 U2AF1L4Q8WU68 220 aaKnown RBP18.91■□□□□ 0.62
SEC13-210ENST00000428626 EDC3Q96F86 508 aaKnown RBP18.91■□□□□ 0.62
SEC13-210ENST00000428626 EMILIN3Q9NT22 766 aa18.91■□□□□ 0.62
SEC13-210ENST00000428626 TRIOBPQ9H2D6 2365 aa18.91■□□□□ 0.62
SEC13-210ENST00000428626 H0YGN5 161 aa18.9■□□□□ 0.62
SEC13-210ENST00000428626 GH2P01242 217 aa18.9■□□□□ 0.62
SEC13-210ENST00000428626 HLA-DOAP06340 250 aa18.9■□□□□ 0.62
SEC13-210ENST00000428626 HOXA7P31268 230 aaPredicted RBP18.9■□□□□ 0.62
SEC13-210ENST00000428626 USP5P45974 858 aa18.9■□□□□ 0.62
SEC13-210ENST00000428626 MAP3K12Q12852 859 aa18.9■□□□□ 0.62
SEC13-210ENST00000428626 PABPC4Q13310 644 aaKnown RBP eCLIP18.9■□□□□ 0.62
SEC13-210ENST00000428626 RPAP2Q8IXW5 612 aaPredicted RBP18.9■□□□□ 0.62
SEC13-210ENST00000428626 COA7Q96BR5 231 aa18.9■□□□□ 0.62
SEC13-210ENST00000428626 GCC1Q96CN9 775 aa18.9■□□□□ 0.62
SEC13-210ENST00000428626 TRIM34Q9BYJ4 488 aa18.9■□□□□ 0.62
SEC13-210ENST00000428626 MORF4L1Q9UBU8 362 aa18.9■□□□□ 0.62
SEC13-210ENST00000428626 TAOK2Q9UL54 1235 aa18.9■□□□□ 0.62
SEC13-210ENST00000428626 USP17L10C9JJH3 530 aa18.89■□□□□ 0.61
SEC13-210ENST00000428626 PDE6AP16499 860 aa18.89■□□□□ 0.61
SEC13-210ENST00000428626 PLCD1P51178 756 aa18.89■□□□□ 0.61
SEC13-210ENST00000428626 TRIM32Q13049 653 aa18.89■□□□□ 0.61
SEC13-210ENST00000428626 SLFNL1Q499Z3 407 aa18.89■□□□□ 0.61
SEC13-210ENST00000428626 HSP90AB4PQ58FF6 505 aa18.89■□□□□ 0.61
SEC13-210ENST00000428626 C20orf194Q5TEA3 1177 aa18.89■□□□□ 0.61
SEC13-210ENST00000428626 NKX2-3Q8TAU0 364 aa18.89■□□□□ 0.61
SEC13-210ENST00000428626 DDX19BQ9UMR2 479 aa18.89■□□□□ 0.61
SEC13-210ENST00000428626 COLQQ9Y215 455 aaPredicted RBP18.89■□□□□ 0.61
SEC13-210ENST00000428626 TCRBV5S4A2TA0A5A2 114 aa18.88■□□□□ 0.61
SEC13-210ENST00000428626 C19orf81C9J6K1 198 aa18.88■□□□□ 0.61
SEC13-210ENST00000428626 SGPL1O95470 568 aa18.88■□□□□ 0.61
SEC13-210ENST00000428626 HERVK_113P62684 666 aa18.88■□□□□ 0.61
SEC13-210ENST00000428626 IRX3P78415 501 aaPredicted RBP18.88■□□□□ 0.61
SEC13-210ENST00000428626 KIF1BPQ96EK5 621 aa18.88■□□□□ 0.61
SEC13-210ENST00000428626 BCL11AQ9H165 835 aa18.88■□□□□ 0.61
SEC13-210ENST00000428626 EHD4Q9H223 541 aa18.88■□□□□ 0.61
SEC13-210ENST00000428626 PAK6Q9NQU5 681 aaPredicted RBP18.88■□□□□ 0.61
SEC13-210ENST00000428626 GINM1Q9NU53 330 aa18.88■□□□□ 0.61
SEC13-210ENST00000428626 TMOD4Q9NZQ9 345 aa18.88■□□□□ 0.61
SEC13-210ENST00000428626 RBPJLQ9UBG7 517 aa18.88■□□□□ 0.61
SEC13-210ENST00000428626 SERPINB13Q9UIV8 391 aa18.88■□□□□ 0.61
SEC13-210ENST00000428626 RANBP2P49792 3224 aaKnown RBP18.88■□□□□ 0.61
SEC13-210ENST00000428626 GOLIM4O00461 696 aa18.87■□□□□ 0.61
SEC13-210ENST00000428626 MS4A1P11836 297 aa18.87■□□□□ 0.61
SEC13-210ENST00000428626 SHMT1P34896 483 aa18.87■□□□□ 0.61
SEC13-210ENST00000428626 Q3C1V9 767 aa18.87■□□□□ 0.61
SEC13-210ENST00000428626 SLC9C2Q5TAH2 1124 aa18.87■□□□□ 0.61
SEC13-210ENST00000428626 CLASRPQ8N2M8 674 aaKnown RBP18.87■□□□□ 0.61
SEC13-210ENST00000428626 NAV1Q8NEY1 1877 aa18.87■□□□□ 0.61
SEC13-210ENST00000428626 ACER1Q8TDN7 264 aa18.87■□□□□ 0.61
SEC13-210ENST00000428626 DEFB118Q96PH6 123 aa18.87■□□□□ 0.61
SEC13-210ENST00000428626 DNAJC2Q99543 621 aaKnown RBP18.87■□□□□ 0.61
SEC13-210ENST00000428626 RCAN3Q9UKA8 241 aa18.87■□□□□ 0.61
SEC13-210ENST00000428626 ZNF532Q9HCE3 1301 aa18.86■□□□□ 0.61
SEC13-210ENST00000428626 MAGEB6P1A0A0J9YX57 407 aa18.86■□□□□ 0.61
SEC13-210ENST00000428626 CHGBP05060 677 aa18.86■□□□□ 0.61
SEC13-210ENST00000428626 GUCY1A2P33402 732 aa18.86■□□□□ 0.61
SEC13-210ENST00000428626 ZYXQ15942 572 aaKnown RBP18.86■□□□□ 0.61
SEC13-210ENST00000428626 CERS3Q8IU89 383 aa18.86■□□□□ 0.61
SEC13-210ENST00000428626 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.86■□□□□ 0.61
SEC13-210ENST00000428626 FARP2O94887 1054 aaPredicted RBP18.85■□□□□ 0.61
SEC13-210ENST00000428626 GABPAQ06546 454 aa18.85■□□□□ 0.61
SEC13-210ENST00000428626 TMED8Q6PL24 325 aaPredicted RBP18.85■□□□□ 0.61
SEC13-210ENST00000428626 LCORLQ8N3X6 602 aa18.85■□□□□ 0.61
SEC13-210ENST00000428626 PORCNQ9H237 461 aa18.85■□□□□ 0.61
SEC13-210ENST00000428626 SMIM22K7EJ46 135 aa18.84■□□□□ 0.61
SEC13-210ENST00000428626 HMMRO75330 724 aa18.84■□□□□ 0.61
SEC13-210ENST00000428626 CNMDO75829 334 aa18.84■□□□□ 0.61
SEC13-210ENST00000428626 IFIT2P09913 472 aaKnown RBP18.84■□□□□ 0.61
SEC13-210ENST00000428626 CYP2D6P10635 497 aa18.84■□□□□ 0.61
SEC13-210ENST00000428626 FXR1P51114 621 aaKnown RBP eCLIP18.84■□□□□ 0.61
SEC13-210ENST00000428626 TTF1Q15361 905 aaPredicted RBP18.84■□□□□ 0.61
SEC13-210ENST00000428626 CERKLQ49MI3 558 aaPredicted RBP18.84■□□□□ 0.61
SEC13-210ENST00000428626 USP17L2Q6R6M4 530 aa18.84■□□□□ 0.61
SEC13-210ENST00000428626 TTC6Q86TZ1 520 aa18.84■□□□□ 0.61
SEC13-210ENST00000428626 GPRC5AQ8NFJ5 357 aa18.84■□□□□ 0.61
SEC13-210ENST00000428626 SDR42E1Q8WUS8 393 aa18.84■□□□□ 0.61
SEC13-210ENST00000428626 TRIB2Q92519 343 aa18.84■□□□□ 0.61
SEC13-210ENST00000428626 DPF3Q92784 378 aa18.84■□□□□ 0.61
SEC13-210ENST00000428626 C12orf42Q96LP6 360 aa18.84■□□□□ 0.61
SEC13-210ENST00000428626 CRISPLD2Q9H0B8 497 aa18.84■□□□□ 0.61
SEC13-210ENST00000428626 ALPK3Q96L96 1907 aa18.83■□□□□ 0.6
SEC13-210ENST00000428626 RAB11FIP3O75154 756 aa18.83■□□□□ 0.6
SEC13-210ENST00000428626 HMGCRP04035 888 aa18.83■□□□□ 0.6
SEC13-210ENST00000428626 ERVK-9P63128 1117 aa18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms